Etheostoma cragini (Arkansas darter): 117952162
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Entry
117952162 CDS
T07493
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117952162 (gabra6a)
04082 Neuroactive ligand signaling
117952162 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117952162 (gabra6a)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
GABA-A
117952162 (gabra6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
117952162
NCBI-ProteinID:
XP_034740187
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Position
10:13583407..13592504
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AA seq
459 aa
AA seq
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MRANCKFGDKFPSMAVLTLTLVTFICWISLGSVFGIERIYSDNITLILDRLLDGYDNRLR
PGSGGGVTEVKTDIFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFEGPTEILRLNNRMV
DKIWTPDTFFRNSRKSISHNTTTPNKLFRIMQNGTVLYTMRLTIGAECPMRLMDFPMDAH
SCPLRFGSYAYTSSEILFTWRKGPVASVECPAESMSLLQYDLVGQTLSSEIFKSNTGHYS
VQVVHFHLKRKLGYYLIQTYVPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSI
SARQSLPKVAYATAMDWFIAVCFAFVASALVEFAAVNYFATLQANRLTPQKAKQEKPEVL
DTASDDENAISLDSSHQEDLKRRNHSGCRSEPEEVLRMPIFLQQGSAFPQIPQLAGTSPI
DKYARILFPLAFAIFNLVYWYIYLAKDTMAIARNTVLKN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctaactgcaaatttggtgacaaatttcccagtatggctgtcctgacattaact
ttagttacttttatctgctggataagtcttggtagtgtatttggaattgagaggatttac
tcggacaacatcactctcattttggatcgacttttggatggttatgacaacagactacgg
ccaggatctggaggtggtgttacggaggtgaaaacagacatctttgtcaccagctttgga
cctgtttcagatgtcgagatggagtacaccatggacatgttcttccgtcagatgtgggtt
gatgagcggcttaaatttgagggccccactgaaatcctgcgactgaacaaccgcatggtg
gacaagatctggaccccagacactttcttccgaaactccaggaagtcaatttctcataac
acgaccacacctaacaaactcttccgcatcatgcagaacggaactgtcctctacactatg
aggctgaccattggtgcagagtgtccaatgaggctgatggacttccctatggacgctcac
tcctgtcctctcaggtttggaagctatgcctacaccagcagtgaaatccttttcacttgg
aggaagggaccagttgcctctgttgagtgtcccgctgagtccatgagtcttctgcaatat
gacctggtgggacagactttgtccagtgaaatattcaaatccaacacaggtcactactct
gtgcaggtggtccatttccacctcaagaggaagctgggctactatcttatacagacttac
gttcctcttataatggttgttgtgctgtcacaagtctctttttggatcaacaaagagtct
gttcctgcacgcacagttgctggcatcaccacagtgctgaccatgaccaccttgagcatc
agcgcccgtcagtcacttcccaaagtagcctatgccacagcgatggactggttcattgct
gtgtgttttgcctttgtggcgtcggcgcttgtcgagtttgcagcagtaaactactttgca
actctccaggccaaccgtctgacgccacagaaagctaaacaagaaaagcctgaggtgtta
gataccgccagcgatgatgaaaacgcaatttcgttggacagcagccatcaggaagacctg
aagagaagaaaccactcagggtgtcgcagtgagccagaagaagttttgcgaatgccgatt
ttcctccaacagggctcagcttttcctcaaatcccgcagctggctggcaccagccccatc
gacaagtacgcacgcatcctcttccccctggcctttgcgatcttcaacctagtctactgg
tacatctacctggccaaggacaccatggcgattgctaggaacacagtccttaaaaactga
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