Etheostoma cragini (Arkansas darter): 117952372
Help
Entry
117952372 CDS
T07493
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117952372 (trappc10)
Membrane trafficking [BR:
ecra04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117952372 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_2
TPR_12
TPR_14
TPR_1
TPR_7
TPR_19
Gryzun-like
TPR_8
TPR_10
Motif
Other DBs
NCBI-GeneID:
117952372
NCBI-ProteinID:
XP_034740505
LinkDB
All DBs
Position
11:8457094..8477203
Genome browser
AA seq
1264 aa
AA seq
DB search
MECQEEKPIIYTMENKPIVTCAGDQGLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTELYKGTVKEDMMRWQNSLRTHGSAD
WVIIVVETNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVRSWNGLLLRRPIDMEKRDGIQRGEA
SLLDLRSYLFSRQCTLLIFLLRPWEVTQRALELLHNCVQELRLLEVSVLEGALDCWVFLS
CLEVLHRIEGCCDQAQLAANCSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNRTVD
LLAGLGDERPETVNSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAIGRLRSARLV
GKSLAEFYMKKGDPERAETFLQEALKSYVSEGWSLPVTHTRKQIAECQKLLGRTEDYLQT
SALLAGDVNLTTEERKHFCQEILTFADKSEDQSQKVTLSMDVFSQLTRLQFQPATASVHS
GAVLQVELTLRCLMPMAVHIQQLAASIHFDLERGGTSGRSKGNQRQTNPGTVEFHQGNSS
AGPPSSSATGPPLELDEIQDRSPSDNSLNSTGVVCTNTHLVMRVHDNLSLPDMPNCVSPP
AVTIKEGAQMLKVQDVTLEPGNNSILFTAPSGQPGTYTLRQLYATVGQVQFVLPHIYPSV
QYEVYSQEPQLTVEPLSEPLLAGLPQMVKFTLLTGHYAVKKGDALQLSNTDTMPILPSTS
CTARISNPTAELVGESALSIQSSEKVTSISLPATPPYHTVEFLLEVLCIIPSGSDRPANE
RLTNGEVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHSLLSAGN
RKYIQVSVQNVSDVNFTLAEVKLAEKQYASLELQSLNTKTQQLLCSKHSVFCLWEVRWKD
DLPSCLQCVFSANFSPLKQDVSAYKPFHYQFQLERVTTLYSVRAEILPPAGEQNCRSGFL
CGLEVCITRLTEPAEGEMAEDSKTDTDGLKTTKLMYEVADSSSNWAVCGKSSGMVLMPMA
ANATHKVQIEVMPLFAGHLPFPKIKVLKYLPHTAAVAIQPDPDSCVENDSLSLLDKALDD
QGDTASIRSRGSVHSVGSGDQQQKGVAMPRLEPFSPGQVFNHSHTQQVLVLPATDDHILE
VNAT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaagccaatcatctatactatggaaaacaagccgattgtgaca
tgtgctggagaccagggcttgtttacgtctctctatacctcattggcccaacaacttccc
agggagccaatggagtggaggaggacttatggccgtgcaccaaaaatgatccaccttgaa
gctaattttgtccagtttaaagaggagctactccccaaggagggcaacaaggctctcctc
accttcccctttctccacatctattggaccgactgctgtgacacagagttgtataagggc
acggtgaaggaggacatgatgcgctggcagaacagcttgcgaactcatggctcagcagac
tgggtcatcattgtcgtggagaccaacgacactaagaagaagaacaagaccaacatcctg
ccacgttcatccattgtggacaagatccgcagcgatttttgcaacaagcagaacgacagg
tgtgtggtgctgtctgatcctctgaaggactcgtctcggtctcaggaatcctggaattcc
ctgctgctcaagctgcgaactcttctcctcatgtccttcaccaagaacctggggcgcttt
gaagacgacatgcgtacgctccgagagaaacgcacccagcccggctggagcttctgtgaa
tacttcatggtccaggaggagctggcctttgtttttgagatgttacagcagtttgaagat
gccttggtccagtatgacgaactcgatgctctttttacccaatacgtccttaactttgga
gctggagatacagcaaactggctcggatcgttctgcgccccagtgcgcagctggaacggc
ttgcttcttcggcggcccatcgacatggagaagagggatgggatccagcgcggggaggcc
agcctgttagatctgaggagctacctgttctctcgccagtgcaccttactcatcttcctc
ctgaggccctgggaggtcacgcagagagccctggagctgctgcacaactgtgtccaggag
ctccgcctgctggaggtgtcggtgctggagggagcgctagactgctgggtgtttctcagc
tgcttggaggttctgcacaggatcgagggctgctgtgatcaggcccagttagctgcaaac
tgctcccatactgtcgggctgtgggcctacgccactgacaagctgaagtccctgggggaa
ctctgtggcctggtgtcagagaagggacccacatcagaggacctgaacaggactgtggat
ctgctggccggactgggtgatgagaggcccgagactgtcaacagtttgcagagcccttac
aaaaagctgaaagaagccttgtcgtctgtggaagctttcgaaaggcactatcttgaactc
tctcatgctgctatggagatgtatagggccatcggccggctaaggtctgccagactggtg
ggaaaaagcctcgcagagttctacatgaagaagggggaccctgagcgggcagaaaccttc
ctacaggaggctttgaagtcgtacgtgtcggagggatggagcctccccgtcactcacacg
aggaaacagattgctgagtgtcagaaactgctgggcagaactgaagattacttgcaaacc
agtgccttgttggctggtgatgtgaacctgaccacggaggagaggaagcacttttgtcaa
gaaattctgacctttgcggacaagtctgaagatcagtctcagaaagtgactctcagcatg
gatgttttttctcaactcacacggctacagttccaaccagccacagcctcagtgcactct
ggagccgtcctgcaggtggagctcactctgcgatgtttgatgcccatggctgtgcacata
cagcaactagctgctagcattcactttgacctggagcgtggagggactagtggaaggtct
aagggaaatcagagacaaacaaacccagggacagtagagtttcaccaagggaactcgtca
gcgggtccaccctcctcctcagccactggtccccctttagagctagacgagattcaagac
aggagtccttcggacaattcactcaactctacaggagtggtctgtacaaacactcatctg
gtcatgcgtgttcatgacaacctctcgctcccggacatgcccaactgtgtcagccctcct
gctgttaccataaaggaaggtgcacagatgctgaaagtgcaggatgtaacattagagccc
gggaataacagcatcctattcacagcaccaagtggacaaccaggaacttacacattgcgt
cagctgtatgccacagtgggtcaggtgcagtttgtacttcctcatatctacccatcagtc
cagtatgaagtctattctcaggagcctcaactcaccgtggagcctctctcagagccactg
ttggccggtctgcctcagatggtgaagttcactctgttgacgggtcactacgcagtgaag
aagggagacgctctgcagctcagcaacacagacaccatgcccatcctgccctctaccagc
tgcactgcccgcatcagcaaccctacagctgagttggtgggtgaaagcgccctgtccatc
cagtcatctgagaaggtgaccagcatcagcctgcccgccacccctccttaccacactgtg
gagttcctcctggaggtcctgtgcatcatcccgtcggggtctgaccgacccgccaatgag
aggctgaccaatggggaggtccgccatcgaccacgcagctacagtcatccagacacgccc
atgaccgccatcgaccagaggatgtccatcgactgtccgtggtccatctattccacgctg
cttgccctcaccttctacatccctttcaagaccaaacactctctgctttctgctggaaac
aggaagtacatccaagtgtctgtgcagaacgtatcagatgtgaacttcacgctggcagaa
gtaaagctggccgaaaagcagtatgcgtcattagagctgcagtctctcaacactaaaact
caacagcttttgtgcagtaagcacagcgtgttctgcttgtgggaggtgaggtggaaggac
gacctgccctcctgtctacagtgtgttttctctgccaacttctctccactcaagcaagac
gtctctgcttacaaacccttccactaccagttccagttggagagagtcactacgttgtac
agtgtgagagctgagatcttgcctcctgctggtgagcagaactgtcgctccggtttcctc
tgtggcctggaggtgtgtataacccgactgactgaacctgctgagggagagatggcggag
gacagtaagactgacacagatggcctcaaaaccaccaaactcatgtatgaagtggctgac
agcagcagtaactgggcggtgtgtgggaagagttcagggatggtgttgatgccgatggcg
gccaatgccactcacaaggtgcagatcgaggtgatgcctctgtttgcaggacacctgccc
ttccccaagattaaagtgctgaagtacctgcctcacactgcagcagtggccattcaacca
gaccctgacagctgcgtggagaatgacagtctgtccctgctggacaaggcgctggacgac
cagggagacacagcgagcatccgcagtcggggcagcgtgcactctgtgggcagcggtgac
cagcagcagaagggcgtggccatgccacgtctggagccctttagccccggacaggtgttc
aaccacagccacacacagcaggtcctggtgctgcccgccaccgacgaccacatcctggag
gtcaacgctacatga
DBGET
integrated database retrieval system
