Etheostoma cragini (Arkansas darter): 117952403
Help
Entry
117952403 CDS
T07493
Symbol
si:ch211-79m20.1
Name
(RefSeq) bromodomain-containing protein 4 isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
ecra04510
Focal adhesion
ecra04518
Integrin signaling
ecra04540
Gap junction
ecra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117952403 (si:ch211-79m20.1)
04020 Calcium signaling pathway
117952403 (si:ch211-79m20.1)
09133 Signaling molecules and interaction
04518 Integrin signaling
117952403 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117952403 (si:ch211-79m20.1)
04540 Gap junction
117952403 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117952403 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecra04052
]
117952403 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117952403 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
ecra04052
]
Cytokines
Growth factors (RTK binding)
117952403 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117952403 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
117952403
NCBI-ProteinID:
XP_034740583
LinkDB
All DBs
Position
2:complement(26566691..26581663)
Genome browser
AA seq
577 aa
AA seq
DB search
MRSWVLLLLLAALSAARLRLGSAEGDALPSSLVDLVRNSPISSVDDLKLLLQETNAIEEE
EDKHDILTNHTHGRYTRSLVEAQPAQQAMCKVRTEVMEVTRSMLDRRNANFLLWPPCVEV
QRCSGCCNTRLLQCVPTVTSSRYLQVIKIQYINRKAHYDKAIISVEDHISCRCQPLSSSS
SSSSSSSSSSVPMSHSSIQSNPNPPLPPPPQPPPSSHLPLPLPRTVHQAPPKTHASKADL
HRHDDLKHNQQHYHTEEREPVARQWQQGSYTQLVHWTQPRVQQGPTHVQPGVHQPIAGVL
GSVSSWPSEARAAHSIMGNTQQVGHGSGYDGSREESGMHVANSGGGVHHPDHTQRQQQLL
QHQQREQFLQQYQNPHQPHHPQQFRHGAAEDQELRTRYRLNTPQSDSASPPDSPTEPPKL
EENPTNPMTTNQKYSVTSQTITEVTKHKQTETATTSQKEGNPREESGSANSGDSAGAELA
NQGKEKDSNLTSRVSHLTKEARQKVLEIIQREPDRQTHPHPHHALQRPKPTTFKTALSTA
APISPSARQAPFRPALPRRRRKHRKRISKAAIRAMIM
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtcctgctgctgctgctagctgcgctctcagcggcccgtctgcggctc
ggcagcgctgagggtgatgcgctcccctcgtcgctggtcgacctggtgaggaactctccc
atctcctctgtggacgacttgaagctgctgctgcaggagaccaatgcaatagaagaggaa
gaagacaagcatgatattctcacaaaccacacccatggccgatatactagaagccttgtg
gaggcgcagccggctcagcaggcgatgtgtaaagttcggacggaggtgatggaggtgacc
aggtccatgttggaccgccgcaatgccaacttcctgttatggccaccatgcgtggaggtg
cagagatgttcgggctgctgtaacaccagactgttgcagtgtgtccccaccgtcacctcc
agcagatacctgcaggtgataaaaatccagtacataaacaggaaagcccactacgacaaa
gccatcatctcagtggaagaccacatcagctgcaggtgtcaacctctctcatcttcctca
tcctcctcatcttcctcttcctcctcatctgttcccatgtctcactcctccattcagagc
aaccccaacccccctctacctcctcctccgcagcctcccccatcctcccaccttcctttg
cccctccccaggaccgtccaccaagctccaccaaagactcacgcttccaaggccgacctc
catcgccacgacgacctgaagcacaaccagcagcactaccacacagaggagcgtgagccc
gtggcgaggcagtggcagcagggcagttacacccagctggtgcactggacgcagcccagg
gtgcaacaggggcccacacacgtgcagccgggggtgcaccagccgattgctggggtgctc
gggtcagttagcagctggccatctgaagcgagggcggcgcatagcatcatgggaaataca
cagcaggtcgggcacgggagtgggtatgacgggagcagggaggaaagcggcatgcatgta
gcaaacagcggtgggggagtgcatcatccagatcacacgcagaggcagcaacagttgttg
cagcatcagcaaagggagcagtttctgcagcaatatcagaatcctcatcagccacatcat
ccacagcagttcagacatggagcagctgaggaccaagaactgaggacacgatatcgactt
aacactccccaatcagacagcgcctctccgcctgacagcccaactgagccgcccaaatta
gaagaaaaccccaccaatccaatgaccaccaatcagaaatactcagtgaccagccaaacg
attacagaggtcacgaaacacaaacagactgagactgctacgaccagtcaaaaagaaggg
aacccaagggaagaaagcgggtccgccaatagtggggattcggccggggcagagctggcc
aatcaggggaaggaaaaagactcaaatctgaccagcagggttagtcatttaacaaaggag
gcgagacaaaaagttctggagataatacagagggaaccggatcgacagactcatcctcat
ccgcatcatgctctgcaaagaccaaagccgaccacatttaaaacagccctctctactgcg
gcccccatatcaccctcagcccgtcaggccccgttccgtccagccttgcctcgccgcagg
aggaaacaccgcaaacgcatcagtaaagcagccatcagagccatgatcatgtag
DBGET
integrated database retrieval system
