Etheostoma cragini (Arkansas darter): 117952490
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Entry
117952490 CDS
T07493
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117952490 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117952490 (mid1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117952490 (mid1)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117952490 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
117952490
NCBI-ProteinID:
XP_034740713
LinkDB
All DBs
Position
11:13371768..13398003
Genome browser
AA seq
690 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAASYSKAMTSPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHHVAALGDRFDKLKKSPGRFLYVVGRDHSHQE
ADQQALDSNLSSLIKRTSELEGLMGKLIQTCQHVEVNASRQENKLLEECDQLINIIQQRR
QIIATKIKEGKSVRMRKLAQQIASCKQCIERSSSLITQADQTLKETDHTRFLQTAKSTCE
RVSMATASSQILLPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPVIREELCTASYD
TITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADNWMIVPNIKQNHYTVHGLQCGT
KYIFILKAINQAGNRSSEPGKLKTNSQPFKLDPKSAHRKLRLSHDNLTVERDETSSKKSH
SQDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKQEWVGKNSASWVL
SRCNNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDSGSLSFYDAVGSQHLHTFEIAFAQPV
CPVFNVWNRCLTVLTGLPIPDHLEGTDYNN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaattgacctgcccaatctgtctggagctctttgaggaccca
ctgctcttgccctgtgctcacagcctttgtttcaactgtgcccatcgtatcctggtatca
cactgcacgcccagcgagccaatccaatccatcagcgcatttcagtgtccaacctgtcgc
tatgtcatcaccctcaaccagaggggcctagagggactcaaacgcaacgttacattacag
aacatcatagaccgctaccagaaggcttctctaagcggacccaattctcctaacgagacg
cggcgcgagcgagctgcctcgtacagcaaagccatgacttccccaggggaccgggtgcag
tgccagttttgtgagcaggaccctccgcaggacgctgtgaagacctgtgtcacctgtgag
gtgtcgtactgcgatgagtgtctcaaggccacccaccccaacaagaagccgttcacgggc
caccgtctcatcgagcccttgctggactcccatctgcgagggcttatgtgtctggagcat
gaggatgagaaggtcaacatgtactgtgtgacagatgaacagttgatctgtgcattgtgt
aagctggttggccgacaccgggaccaccacgtggcagccctcggtgaccgatttgacaaa
ctcaagaaatcacctggccgctttctctatgtggtggggcgtgatcattcacaccaggag
gcagaccagcaagctttggattccaacctcagcagtctaatcaagaggacaagtgagttg
gaaggtctgatgggaaaactcatccaaacctgccaacatgttgaggtaaacgcgtcccga
caagaaaacaagctgctggaggagtgtgaccagctaattaatatcatacagcagcggaga
caaatcatagctaccaagataaaggagggcaagtctgtgcggatgaggaaactagcccag
cagatagccagctgcaagcagtgcattgagaggtcctcctccctcatcactcaggcagac
caaactctcaaggagacggatcacactcgcttcctccaaacggccaaaagcacctgtgag
agagtttctatggcaacagcttcctctcaaatcctgttaccagaaattaacctgaatgat
acctttgatacttttgcgttggacttcacaagggagaagaaaatgcttgaaagcttggat
tacctcacagcaccaaatccaccagtaatccgcgaggaattatgtacagcttcatacgac
acgatcacagttcactggacatcagatgacgaattctctgttgtatcatatgaacttcag
tatgccatctttaccagccaatctaatgttgtcagtttgtgcaactctgctgacaattgg
atgattgtaccaaacatcaagcaaaatcactacactgtgcacgggcttcagtgtggaaca
aagtacattttcattctgaaggccataaaccaagctggaaaccgcagcagtgaaccaggg
aaactcaaaaccaacagtcaaccattcaagttggacccaaagtcagctcaccggaagttg
aggttgtcccatgacaacctgactgtggagagggacgagacgtcatccaagaagagccac
agtcaggaccgcttctccagccacagcagctacggtgtcacaggaaatgtctacattgac
agtggccgccattactgggaagctctgataggaggaagcacatggtttgcagtgggcatt
gcatacaagtcagcaccaaaacaagagtgggttggtaaaaactctgcctcctgggtactg
tctcgatgcaacaactcgtgggtggtacgtcacaacagtaaggagatgcccatcgagcct
tcaccgcacctgcgtcgtctcggagtgctgttggactatgactctggatctctgtctttc
tacgacgctgtcggctctcagcacttgcacacatttgaaattgcctttgctcagccagta
tgccccgtgttcaatgtctggaacaggtgtttaacagtcctcactggactgcctatccca
gatcacttagaggggaccgactacaacaactga
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