Etheostoma cragini (Arkansas darter): 117952547 Help Entry 117952547         CDS       T07493                                  Symbol sympk Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism ecra  Etheostoma cragini (Arkansas darter) Pathway ecra03015   mRNA surveillance pathway ecra04530   Tight junction Brite KEGG Orthology (KO) [BR:ecra00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     117952547 (sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     117952547 (sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ecra03021]     117952547 (sympk)    03019 Messenger RNA biogenesis [BR:ecra03019]     117952547 (sympk) Transcription machinery [BR:ecra03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      117952547 (sympk) Messenger RNA biogenesis [BR:ecra03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      117952547 (sympk)     U7-dependent histone pre-mRNA processing factors      117952547 (sympk) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Adaptin_N INTS1_R4 Cohesin_HEAT Motif Other DBs NCBI-GeneID:  117952547 NCBI-ProteinID:  XP_034740814 LinkDB All DBs Position 11:1901403..1921777 Genome browser AA seq 1260 aa AA seqDB search MEFSSEEGDTQTPHVVDMTTSERVVDLLNQAALIATEEKLTVLKQVQELIINKDPSLLDN FLDELIAFQTDKSIEVRKFVIGFIEEACKRDNELLLRLIANLNMLLKDESVNVVKKAILT LTQLYKVTLQWLVRSKTVSERQEACWDLVTQMKGDVLALLDSENDGVRTHAIKFTESLII TLSPRTSDSDVPKRQEGDISLGKVPRDHSYIRYDVLCEEGKAALEKLLKFMVHPAISSIN LTTTLGSLATIARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLKLHLVAVLKHP CSLEFQVQISTLLLDLGMPQSEITRSTPAPREQRKRPRHEEYTEGKKVKMEPTLMEDDED KEEPVPISAPKPAAVPAAQSAIDLTAEFLCPLLSPDNVANLVLISMVYLPDVMPASFQAT YTPVESAGTDAQIKHLARLMATQMTAAGIGPGLEQCKAREGETAKDEVSNEDSDAKDPLI KRKVSALVGQAISVVGGYEKEKAPATEAPAAVKRLPEPILPTAQTKMTGATGRKKVFRLS DVVQPLSDTQIETLTSKAVKRILHSEKAIAQSGMSHVRVKLLSKLVTQFEGMMREDVLEF ILEDIRTRSDLAFSLLYQEYNTYLSQLPSGLLDSYDQCLYTLLSGLQEKPEQRDGLFTKL VLEAPIITESALDVIRRYCEDESRVYLGMTTLKELIVKRPSRQFQYLHVLLDLSSHEKEK VRTTALAFLKRMYEKDQLRDYIEKFALNYMQLLVHPNPPSLLFGADKDTEVASPWTEETV RQCLFLYLSLLPLNHRLVHELASVYTEAIADIKRSVLRAIEQPIRGMGMNSPELLLLVEN CPKGAETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVINGLEKSEVIQAL PKLIKLNPIVVKEVFNRLLGTQHSEGSSSVSPLTPGDLLIALHNIDSNKCDMKSIIKATN LCFGEKNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIVKQ VWKYPKVWEGFVKCCQRTKPQSYSVLLQLPPQQLASVFERCPEMREPLLQHVLSFTPHQQ AHIPNSTMLVLEANKKAEPKPAEPVMEKEMELIPAPVREEAPTAAMEVTPTVALEKASTP TMALEKAPTPPVALEKAPTPPVALEKAPSVELEESETLKQQHPAVMKDEEEPMEQEESGP VIQEETVDSVSQELTRAGGTPSPGPELVEEPMEASHPREEVKDVDADVTPQAESSSQDVE NT seq 3783 nt NT seq  +upstreamnt  +downstreamnt atggagttttcttccgaggagggggacactcaaaccccccatgtcgtcgatatgaccacc agtgaaagggtggtggaccttctgaaccaggctgcgctgatagccacggaggaaaagcta accgtgctcaaacaggtccaggagctcatcattaacaaggatccttctcttcttgacaat ttcttggatgagttgatcgccttccagactgacaagtctatcgaagtgaggaaatttgtg attggcttcatagaggaagcatgtaaaagggacaatgaacttcttctcagactgatcgcc aatctgaacatgttgctgaaggatgaaagtgtgaacgtggtgaagaaagccattctcaca ctcacacaactgtacaaagttactctgcagtggttggtgcgctccaagacagtgtcagag aggcaggaggcatgctgggatctggtcacacagatgaaaggggatgttctggccctgctg gactcagaaaatgacggcgttcgcactcacgccatcaaattcacagaatcattaatcatc accctgtcaccgcggacgtcagactcggacgttcccaagcgacaggagggcgacatcagc ctgggcaaagttcccagagatcactcttacattcgctacgatgttttgtgtgaggaggga aaggctgcactggagaagctgctgaagttcatggtccatccggccatttccagcatcaac ctcaccacaacacttggctccctggccaccatcgcccgccagagaccaatgttcatgtca gaggtggtccaggcgtatgagacactgcatgccaacctgccacccactctggccaagtct caggtcagcagcgtacgaaagaacctgaagctgcacttggtggccgtcctcaagcatccc tgcagcctggagttccaggttcaaattagcactctgctgctggacctgggaatgcctcag agtgaaataacacgctctacacctgcaccccgagagcagcgcaaaaggcctcgccatgaa gagtacacggaggggaaaaaggtcaagatggagcccaccctgatggaagatgatgaagac aaagaggagccggtccctatctcggcccctaaaccagctgcagttccagcagcacagtca gccattgacctcacggctgagttcctgtgcccgctgctctcccccgacaacgtagccaac ctggtgctcatcagcatggtgtatctgccggatgtcatgccggcatccttccaggccacg tacacacctgtagagtcggcaggcactgatgcccagattaaacatctggcccggttgatg gccacgcagatgaccgcagctgggatcggtccaggactcgagcagtgcaaagccagagaa ggcgaaacagccaaagacgaagtcagcaatgaggactctgatgctaaagacccgcttatc aagcgcaaagtctccgcgctggtgggacaggccatctctgtggtgggggggtacgagaaa gaaaaggctccagcaacagaggcccccgcagcggtcaagaggcttcccgaacccatcctt cctacggcgcaaaccaagatgaccggggcgaccgggaggaaaaaagtcttccggttgtcg gacgtcgtccagcctttatcggacacccagatcgagacgttaacctccaaagcggtcaaa cgcatcctgcattcagagaaggccattgctcaaagtggcatgtcccacgtcagagtgaag ctcctctccaagctcgtgacgcagtttgaagggatgatgagagaagacgtgctggagttt attctggaggacatcaggacacggagcgacctggccttctctctcctctaccaggagtac aacacctacctcagccagctgccgtctgggctgctggacagctacgaccagtgtctgtac accctgctgtcgggcctgcaggagaaaccggagcagagggacggacttttcaccaagcta gtgctggaggctcccatcataacagagtcagcgttggacgtgatccggcgttactgtgag gacgagtctcgggtgtatctgggcatgacgacgctgaaggagctcatcgtcaagcggccc tcgaggcagtttcagtatctgcatgtacttctggacctcagctcacatgaaaaagagaag gtgcggaccactgccttggcttttctcaagcgtatgtacgagaaggaccagctcagggac tacattgagaagtttgccctgaactacatgcagcttctggtccaccccaatcctccatct ttgctcttcggagctgacaaagacacagaggtggcctccccctggactgaagagaccgtg agacagtgtctgttcctctacctgtccctgctgcccctaaaccaccggctggtccacgag ctggcgtcggtctacaccgaggccatcgcagacatcaagcgcagcgtgcttcgagccata gagcagccgatccgtggaatggggatgaactctcctgagctgctgctcttggttgaaaac tgtcctaaaggagcagagacgctagttactcgctgtctgcacattttgacagataaagtg cctccgtccccagagctggtggagcgagtgagagacctgtaccacaaacgagtgccggat gttcgtttcctaattccggtcataaatggcctcgagaagagtgaagtaatccaggctctg cccaagctgatcaaactcaaccccattgtagtgaaggaggtgttcaaccgcctgttgggc actcaacacagtgagggaagttcgtctgtgtcccccctcacgccaggagacctgctgatt gccttgcacaacatagactcaaacaaatgtgacatgaagtccatcatcaaagctaccaac ctgtgcttcggggagaagaacgtgtacacgtctgaggtcctggccgtggtgatgcagcag ctgatggagcagagtcccctccccatgctgctcatgcgcaccgtcatccagtccctcacc atgtacccccggctgggaggcttcgtcatgaacatcctgtcccgcctcatcgtcaagcag gtgtggaagtaccccaaggtgtgggaaggttttgtgaagtgctgccagaggaccaagccc cagtcgtacagcgtgctgctgcagctgcccccccaacagctggccagcgtgttcgaacgc tgccccgagatgagagagccgctccttcagcacgtcctctccttcacgcctcaccagcaa gctcacatacccaactccaccatgttggtcctggaagcaaataaaaaagcagaaccaaaa cctgcagagccggtcatggagaaagagatggaactaattcctgccccagttagagaagag gctcccactgctgcaatggaagtgactcccacagtggccctagaaaaagcttccactccc accatggccctggaaaaggctcccactccccccgtggccctggaaaaggctcccactccc cccgtggccctggagaaggctcccagtgtggaactggaggagtcggagacgttaaagcag caacacccggccgtcatgaaagatgaggaagaaccaatggagcaagaagagtctggtcca gtgatacaggaggaaactgttgactctgtttcccaggagttgacgagagcgggggggacg ccgtcgcctggaccggagctggtggaggaaccgatggaggcgtctcacccccgggaggag gttaaagacgtggacgctgacgtcacaccgcaggctgagagcagcagccaggacgtagaa tga

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