Etheostoma cragini (Arkansas darter): 117952990
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Entry
117952990 CDS
T07493
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
ecra04517
IgSF CAM signaling
ecra04530
Tight junction
ecra04810
Regulation of actin cytoskeleton
ecra05100
Bacterial invasion of epithelial cells
ecra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117952990 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117952990 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
117952990 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117952990 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117952990 (arpc1a)
05100 Bacterial invasion of epithelial cells
117952990 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117952990 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117952990 (arpc1a)
Membrane trafficking [BR:
ecra04131
]
Others
Actin-binding proteins
Arp2/3 complex
117952990 (arpc1a)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
117952990 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
EIF3I
Beta-prop_HPS5
RMC1_N
Beta-prop_EML
Rax2
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117952990
NCBI-ProteinID:
XP_034741576
LinkDB
All DBs
Position
2:complement(24729110..24735577)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDGGALTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgttggaacccatcacctgccatgcgtggaaccgcgacagg
acacaaatagccatcagtccaaataaccatgaagtccatatttacaagaagagtggcaac
cagtgggttaagacccatgagctgaaggagcacaatggacacataacaggtattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagcagaccgtaatgcctatgtgtggtcc
cagaaggaaggggtatggaagccaacactggtcatcctcaggatcaaccgagctgccaca
ttcgtcaagtggtctccactggagaacaagtttgcagttggaagtggtgctcgactcatc
tctgtctgctactttgagtctgagaatgactggtgggtgagcaagcacatcaaaaagcca
gtacgttccaccatcctcagtctggactggcatcccaacaacatcctgctggctgctgga
tcctgtgacttcaaatgcagagtattctcagcctacattaaggaggtggaagagaaacca
ggccccacaccctggggcagcaagatgccatttggcgctgtgctagcagaatttggagga
gcgggtggagggggttgggtccactccgtctctttctcagcctctggtaatcgcctggcc
tgggtcagccatgatagcactgtcactgtggtggacagctccaagactgccagtccctca
cagctgaagacggagttccttcctctcctcagtgtcatttttgtttcagagaacagtcta
gtagccgcgggccacgattgttgccccatgctgttccgttgcgacgatggtggagcgctg
acatttgtgtccaagcttgaccttcccaagcagagtatccagaggaacatctctgccatg
gagcgcttcaggaacatggacaaaagagccaccacagaggaccgcaacactgccctggac
acactgcaccagaacagcatcacccaagtgtccatctatgaaggagataaaagggattgt
cgcaagttctgcaccacaggcatcgatggagcaatgaccatttgggacttcaagagtcta
gaagcttctatccagggtctccgtatcatgtga
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