Etheostoma cragini (Arkansas darter): 117953005
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Entry
117953005 CDS
T07493
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117953005 (ddx18)
03009 Ribosome biogenesis [BR:
ecra03009
]
117953005 (ddx18)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117953005 (ddx18)
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117953005 (ddx18)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
90S particles
Helicases
117953005 (ddx18)
Pre-60S particles
117953005 (ddx18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
117953005
NCBI-ProteinID:
XP_034741591
LinkDB
All DBs
Position
11:complement(29309662..29316653)
Genome browser
AA seq
654 aa
AA seq
DB search
MADLQMKLLRKKIQKRSDKNKERKLLKTQTDEEETVNCNGPEEECPEAAATCPKPKKKQK
LQIEGTTTEETPLKKKTKKKRKLADTVESPGNLGKKTKTVKEEAEEEGEGAVLAEGEQAT
GKKEEATDEEDEDKSRGEEEEEEQHQPELPSGLTGAFEDTSFASLAELVSDGTLKGVKEM
GFEHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTGVVIL
SPTRELAMQTYGVMKELMTHHVHTFGLIMGGSNRSAEAQRLANGVNILVATPGRLLDHLQ
NTPGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSATQTRKVEDLARI
SLKKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMS
VKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWI
VQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQAKVPLSEFDFSWSK
ISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVNTLNLPMVAVSFGFKV
PPYVDLNVHSSRGVKMQKRGGGGGFGYQKSKNPHKSRIFKHVNKGKSDRRQFSR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctacagatgaagcttctccgcaagaaaattcagaaaagaagtgacaagaac
aaagagcggaaactacttaagacccagaccgacgaagaagagaccgtcaactgtaacgga
ccggaagaggaatgtcctgaggcagcagcgacttgtcctaagcccaagaagaaacagaag
ctgcagattgaagggaccacaacagaggaaacaccgctgaagaagaagactaagaagaaa
aggaagcttgctgacacagttgaatcaccgggtaaccttgggaagaagaccaaaacggtg
aaagaagaagcagaagaagagggagagggagcggtattggcagagggagaacaggctact
ggcaaaaaagaggaagctacagatgaagaggatgaagacaaatccagaggagaggaggag
gaggaagaacaacatcaacctgaattaccatctggcttaacaggagcatttgaggacaca
tcctttgcctctctcgctgagctggtgagtgatggcacgctgaagggcgtgaaggagatg
ggtttcgaacacatgactgagatccagcacaaaagtattcgtcccctgttggagggaagg
gatgtcctggctgctgccaagacgggtagtggaaaaaccttggccttcctcatcccctct
atagagctcatctacaaactcaagttcatgcccaggaacggcaccggtgtggtgatcctt
tcacctacacgcgagttggccatgcaaacctatggtgtgatgaaggagctgatgacgcac
cacgtgcacacctttggtctgatcatggggggcagcaaccgctctgcagaggcccagaga
ctggccaatggagtcaacatcctggtggccacgcctggccgcctgctggaccaccttcag
aatacccctgggtttatgtacaagaacctacagtgtctgattatcgatgaggcagaccgt
atcttagaggtgggcttcgaggaggaactcaagcagattatcaaactgctgccaaaaaag
agacagaccatgctgttttcagccactcagacccgcaaggtggaggacttggctcgcatc
tccctgaagaaagagcccctttacgttggcgtggatgacaacaaagacaatgccactgtt
gacggcctggagcagggttacgtggtgtgcccgtcagagaagcgcttcctgctgctcttc
acattcctaaagaagaaccgcaagaagaagctcatggtcttcttctcttcctgtatgtct
gtgaaattccactatgagctactcaactacattgacctgcctgtcatggccattcacggc
aagcagaagcagaccaaacgtaccaccaccttcttccagttctgcaacgctgactcgggc
atcctgctgtgcactgacgtggccgcccgaggcctggacatccccgaggtggactggatt
gttcagtacgaccccccagatgaccccaaggagtacattcaccgggtgggtcgaacagcc
agaggcataaacggcagaggccacgcgctgctcatcctccggccagaggagctcggcttc
cttcgcttcctgaagcaggccaaggtcccattgagcgagtttgacttttcttggagtaaa
atctctgatatccagtcccagctggagaagctgattgagaagaactattatctccacaag
tcagcccaagaggcctacaagtcctatgtgagggcttatgactcccactcgctgaaacag
atctacagcgtcaacaccctcaacttgcccatggtggcggtgtcctttgggttcaaggtt
cctccatatgttgatctgaacgtccacagcagtagaggtgtgaagatgcagaagcgagga
ggcggaggcggttttggataccagaagtccaagaacccgcacaaatccagaatttttaag
catgtcaacaaaggaaagagtgacaggagacagttctcacgctaa
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