Etheostoma cragini (Arkansas darter): 117953118
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Entry
117953118 CDS
T07493
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117953118 (rims1b)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117953118 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
117953118 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117953118
NCBI-ProteinID:
XP_034741805
LinkDB
All DBs
Position
2:7429015..7512899
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AA seq
1683 aa
AA seq
DB search
MSASVGPQGGPRPPTAPPSMPDLPDLSHLTEEERKIIMAVMARQKEEEDKEQAMLKTLHQ
QFESYKQEVRRIGVETRRQQTQLKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGR
VSLRSNNEDKVCLIVKDRVMWVCNLCRKQQEILTKSGEWFSGSGARPGSLGTPATGGEAQ
LDRKLLRSRSQAPPSSTNANAGPPNGTQLPASVTAAKGGDTMPGSRSQSEPPREKKRPVS
LHEQNGKGGLGRGSGRRAAGKLPSQSSLDERVVPGERRLGDGRRLEKIHSQDYEDAEGNL
GRSETHRRRPEDEEQRERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHARVSKVRH
ERRHSDLAINEVGLGPSDGGGVGKGGEVPENRLARRGGGGGGAGDHKALLENHQAYTGDR
TVGVGGGAPPAGGGGRSGTQPGGPVPPDWSQNKGRLEHGPTRTPRDKGGENLLRKDSQSS
DQSESLRPPPPRSYKSKRGVNKRQMSISSSEEEGGSTPEYTSCEDVDMESVSEKGDWDCH
SLDPTVWHHPVTWQPSKEGDHLIGRITLSKRSAMPREAGSLLGLKVVGGKMTESGRLGAF
ITKVKKGSLADVVGHLRAGDEVLQWNGKSLPGATKKEVYNIILESKAEPQVEIVVSRPIG
SIHRIMSKNFLRKVFRAYQDIPRIPESSHPPLESTGSSSFESQKMDRPSISVMSPTSPGT
LRDLPLVLPGQLSVKLWYDKVGHQLIVNVLQAIDLPPRPDGRPRNPYVKMYFLPDRSDKS
KRRTKTVKKSAEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELE
TALLDDIPHWYKLQTHDMSSIPLPQPSPYLPRRHVHGDSPSKKLQRSHRIIDSEFDDGLM
VVTKDAERNSRERERGSTLAVPEQQRPVQHRSRSVSPHREDSCRARSRPAHVPMQRSLDE
IHQNRHHSNSPSRYHDSHLEHQRSGDSDYEYSEDSEVLEVHRSIRGGSAECLHTNRGIGR
YSNTLPPKMPLLVNGIHKDIYSSTLPACLKSKPYHRQEGGSTMPRSILTHRVLRFTDEVT
VSDLQPSLDRVRSASTTCLRPDTNFHSPDRDRCSNSLPRKIPPSPRILVEHVGPEEDRQC
SNSSGPNCQSGSKNSLEGDSRIQPTSILRGSRGRGGLLRPFGQTALAGSCLNSPRLDRAH
PHGSPSSPTGTPSSGRRGRQLPQLPAKSSSIEQALAVEERARQLQMKVHSYRPSASHDPE
TDLKTKREMYAEQRRSSDNMSARSSDSDMSDVSALSRASSASRLSSTSYMSIQSERPGGR
LRSKSLEEEKRDRRISWGVNGEEERRSSTGQRRFSAELKRRRHTVAGDTGESSRQLRSAG
RNMLKSSSVSGEIYTQERTDGSQSDTALGTVGGGSKKRRSSLSARVVAIVGNRRSRSTSQ
ISGPEGKSKKEKGAPIQRSTETGMAVELTRNMSRQPSKESNNGSMNSCNSEGNLIFSGVN
LGASSQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMMEKKGQLEVEVIRARGLVQKPGS
KSLPAPYVKVYLLNNGAYVAKKKTKIARKTLDPLYQQVLLFEESPQGKVLQVIVWGDYGR
MDHKSFMGVAQILMEELDLSSTVIGWYKLFPPSSLVDPTLASITRRASQSSLDSSSGPPG
VRS
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccagggtggccctcgcccacccaccgcgccgccatccatg
ccggatctgccggaccttagccatctcaccgaggaggagaggaagatcatcatggcagta
atggctcggcaaaaggaggaagaggataaagaacaagccatgctaaaaacactgcaccag
cagtttgagagctacaaacaggaggtgcgtcgcatcggcgtggagacgcgccgtcagcag
acccagctgaaggacgacgcgcccacctgcggcatctgccgcaagaccaagttcgccgat
ggctgcggccacctctgctcctactgccagaccaaattctgcgctcgctgtggagggcgg
gtctctctgcgctccaacaatgaggacaaagtgtgtctcatagtgaaggacagggtaatg
tgggtatgcaacctgtgccgtaaacagcaggagattcttaccaaatcaggagaatggttt
tcagggtcaggggcgcgacctgggagcctgggcaccccagccactggaggtgaggcccaa
ctggacaggaagcttctccgctccaggtcccaagccccgccctctagcaccaacgccaac
gctgggccgccgaacgggacacagcttcccgccagtgtcactgctgccaaggggggcgac
accatgcccggctcccgctcccaaagtgaaccacctagagaaaagaaaaggccagtttcc
ctccatgaacaaaatggtaagggaggcctgggccgaggtagtggccgaagagctgctggg
aagttgccgtctcagtcatccctggatgagcgagtggttccaggggagagacgcttagga
gatgggaggaggctggagaagatccattctcaggactacgaggacgcggaggggaacttg
ggtcgttcagaaacccatcggagacggccagaggatgaggagcagagggagcgccagcgc
cgtgaggaggagttccagaatcgttaccgtagtgatcccaacctggcacgatacccggtg
aaaccgcagaaggaggagcaggagatgcgcatgcacgccagggtgtccaaggttcggcat
gaacggcggcacagcgatctggcgatcaatgaggtgggactggggcctagcgacggagga
ggggttggaaaagggggggaagtacctgaaaaccgtctggccaggaggggtggaggtgga
ggaggggcgggagaccacaaggcccttttggagaaccaccaagcctacactggggatagg
accgtgggggttggagggggcgctccacctgcaggaggtggagggagatcaggaacccaa
cctgggggaccggtgcctccagattggagccagaacaaaggccgcctggagcacggtccg
acacggacaccaagggacaagggtggggagaacctgctgagaaaggactctcagagctcg
gaccagtctgagtccctgcggccgccccctccacggtcatacaagagcaagcgcggagtc
aacaagaggcagatgtccatcagcagctcagaggaggagggcggctccacgcccgagtac
accagctgtgaggacgtggacatggaaagcgtcagcgagaaaggtgactgggactgtcat
tctctagatcctacagtgtggcatcatccagttacatggcagccgtccaaagagggcgac
cacctaatcggacgcatcacgctaagcaagaggtcagcaatgccccgcgaggctggctcc
ctcctcggcctaaaagtggtaggagggaagatgacagagtcagggagactcggggccttc
atcaccaaagtcaagaaaggcagccttgcagatgttgtgggacacctacgagcaggtgac
gaggtgctgcagtggaatgggaagtcgttgccaggggcaactaagaaagaagtgtacaac
attatccttgaatccaaggctgaacctcaagtggaaatagttgtttcaagacctataggc
tctatccaccgaattatgtccaaaaacttcttgagaaaagtatttagagcatatcaagac
atcccaagaatcccagagtcatcccaccctcctctagaatctacaggctccagttccttt
gagtcgcaaaagatggaccgtccctcgatatcagtgatgtcccctaccagccccgggacc
ctccgagaccttcctctggtactgcctggacagctctctgtgaagctgtggtacgacaaa
gtgggccatcagttgatcgtcaacgtccttcaagccatagacctgccaccccgaccagac
ggaagaccccgaaacccctatgtcaagatgtacttcctgcctgataggagtgataagagt
aaacggcggactaaaacggtgaagaagagcgctgaacccaagtggaaccagaccttccta
tattcccacgttcaccggcgggacttcagagagcgcatgctagagatcacagtgtgggac
cagcccagagtccaggaggaggagagtgaattcctgggagagatcctgatagagttggag
acggccctgctggacgacattcctcattggtacaaactccaaacacatgacatgtcctct
atacctctgccccagccttccccgtacctcccgcgcagacacgtccatggagacagcccc
agcaagaaactacagaggtctcatcgcatcattgattcagagtttgatgatggtttgatg
gtagtgactaaagatgcagaacgtaactccagggagagagagcggggcagtacgttggca
gtgccggagcagcagcggcccgtccagcaccgctcccgttcagtgtcccctcacagagag
gactcctgcagggctcggtcgcggcccgcacacgttcccatgcaaaggagcctggatgag
atccaccagaaccgccaccactccaactccccttcccgttaccatgactcgcacttagag
catcaacgctccggggactcggactacgagtactctgaggacagtgaggtcctggaggtg
cacaggtctatccggggcgggagtgccgagtgcctgcacacaaacaggggcataggtcga
tacagcaacacactaccccccaaaatgcccctgttagtaaacggtatccataaagacatt
tacagctccactctccccgcatgcctaaagagcaagccgtaccaccggcaggaagggggc
agcaccatgcctcgtagcatccttacacaccgtgtgctcaggttcactgatgaggtcacg
gttagcgacctgcagccgtcgttggacagagtgaggagtgcaagcaccacctgtctgaga
ccagacaccaactttcactcccctgacagagacaggtgctccaactctttgccccgcaag
attccaccaagccccaggatcttagtagaacatgttggccctgaggaagacaggcagtgt
agcaattcatcaggtccaaactgtcaaagtggcagcaaaaacagcctggagggggacagt
cgtatccagcccacctctatcctgaggggcagtagggggagagggggcctgctgaggccc
tttggtcagacagccttggctgggtcctgcctaaactcgccacggctagacagagcacac
cctcatggcagcccctcctctccaacggggactccctcatcaggtcgcaggggcaggcag
cttcctcagctccccgcaaaaagcagcagtatagagcaagcccttgcagtagaggagcga
gcccggcagctgcagatgaaagtacattcctaccggccttcagcctcccacgaccccgag
acggacctcaagaccaaacgggagatgtacgcggaacagaggcgaagcagcgacaacatg
tcggccagatcgtcagacagcgatatgagtgacgtgtcggccctctcccgtgccagcagt
gcctctcgcctcagtagcaccagctacatgtccatccaatcagaacgccccggaggacga
ctcagatccaagtcattagaggaggagaagagagacaggaggatctcgtggggggtgaat
ggagaggaggagaggaggagctcaacaggacagagacggttctctgcagagttgaagcgc
aggagacacactgtagccggagacaccggggagtccagtcggcagctgcgatcagcgggc
cgcaacatgctgaagagctccagtgtgagtggagagatctacacccaggagcgcaccgac
ggcagccaatcagacaccgctctggggacggtgggcggcggcagcaagaagagacgctcc
agcctcagcgcgcgggtggtggccatcgtcggcaaccgtcgcagccgcagcacttcacag
atcagtggccctgagggtaagagtaagaaggagaagggtgcacctatccaaaggagcaca
gagaccggcatggcagtggagctgaccaggaacatgagccgccagcccagcaaagagtcc
aacaacggcagcatgaacagctgcaactctgaggggaatttgatcttctctggagtcaat
ctgggtgccagcagtcagttcagtgacttcctggatggcctgggaccggctcagttagtg
gggaggcaaaccctggccacccccgccataggtgacatccagatcggtatgatggagaaa
aagggtcagctggaggtggaagttatcagagctcgaggactggtacaaaaaccaggatcc
aaatccctccctgctccatatgtcaaggtctatctgctgaataatggagcgtacgtagcc
aaaaagaaaaccaagattgcacggaaaacacttgacccactgtaccagcaagtactgcta
ttcgaggaaagcccacagggtaaagtcttacaggtgattgtatggggagactacggccgc
atggaccataaaagcttcatgggagttgcacaaatcctaatggaggaattggacttatca
agcacagtcattggttggtacaagttgttcccaccgtcgtccttggtggatccgacactt
gcctccataacgcggcgggcttcccagtcgtccctcgacagttcctccggacctcctggg
gtccgatcctag
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integrated database retrieval system
