Etheostoma cragini (Arkansas darter): 117953307
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Entry
117953307 CDS
T07493
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
117953307
NCBI-ProteinID:
XP_034742089
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Position
11:complement(10509441..10520692)
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AA seq
738 aa
AA seq
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MPPLPVPFFLTLLQLAVLTYVSAGAYYGHKQHPQPYQPMQHIQHMGKESFPQQQYLGKEV
PYMQYPHYRKDLPQMPMHKGKEIARKGGGYNGGQDKGQTIPSGAEGIPQGEQGPVGSPGP
EGPAGPPGPPGNGQPGPVGRPGPPGPPGGPGVGKPGLPGLPGKPGGNGENGPQGEMGLRG
EEGPAGQPGPQGPPGPPGLPGIGKPGVQGFTGQPGPKGEPGHKGLPGLPGLPGPKGDKGM
GQPGQPGHKGLPGTPGPAGPRGLPGFGKPGLNGAPGPQGPSGEKGHPGELGPAGPPGEGG
QPGPPGLPGQGKPGQNGLPGQPGMPGGKGHPGPPGLPGKPGLPGFGKPGLPGPKGDDGMG
GSPGLPGPKGDKGHGGLPGMLGPPGPNGPPGPPGPMGTPGGLGAPGPKGDCGEGGPKGLD
GALGSPGPSGMPGKNGLPGENGEPGPRGPPGPSGAKGDGGHKGLPGVPGTPGLPGPKGQV
GLSGEVGPQGPKGIPGMDGKAGSIGPPGLPGPKGDSGLPGQPGIAGEGNPGLPGPIGPPG
KEGPSGPPGQPGQPGLPGPPGPPGVSPDMGAVLSVMGPGLDGVKAGSYGKKGKYGGNGAE
VMGASGLEMPAFTAIVTTPFPPVGTPVVFDKLLYNGRQNYNPETGIFTCDMPGIYYFAYH
VHCKGANVWVALMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTVYVQLPSDQAAGL
YAGQYVHSSFSGYLLYPM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctccctgtccccttcttcctgacactgctacagcttgcagttcttacttat
gtcagtgccggggcatactatggacacaagcaacatcctcagccataccagccgatgcag
cacatccaacacatgggcaaagaaagctttccccaacaacagtaccttggcaaagaggtg
ccctatatgcagtatccccactacagaaaggacctaccccagatgcccatgcataagggc
aaagaaattgctcgtaaagggggtggctataatggtggccaggacaaaggtcagactatc
cctagcggtgctgagggaattcctcaaggagagcaaggaccagttgggtcacctggacca
gagggacctgcaggacctcctggacctccaggtaatggacagcctggacctgtgggacga
cccggacctccaggtccaccaggagggcctggagtgggaaaaccaggcttaccaggactg
ccaggcaagccaggaggaaatggtgagaatggaccacaaggagaaatgggccttaggggt
gaagaagggccagctggccagccagggcctcagggtcccccaggaccacctgggctacca
ggaataggcaaaccaggggtgcagggatttacaggccaaccaggccccaaaggagagcca
ggtcacaaaggtctgccgggactaccaggattaccaggacccaaaggagacaaagggatg
ggccagccaggacaacctggtcacaaagggctcccagggaccccaggacctgctggcccc
agagggctgcctggttttggaaaacctggcttgaatggggcaccagggccacaaggacca
tcaggagagaaaggacatcctggagagctaggaccagctgggccaccgggtgaaggagga
cagcctggcccaccaggtttacctggtcaaggaaagccaggtcaaaatggcctgccagga
caaccaggcatgccaggtgggaaaggtcatccaggaccaccaggtttgccaggaaagcca
ggacttcctggatttggtaagccaggacttccaggaccgaagggtgatgatggtatgggt
gggtcacctggacttccaggaccaaaaggagataagggccatggaggattacctggtatg
cttggtccccctgggccaaatggtccaccaggtcctccaggtcctatgggaaccccagga
ggtttaggtgcacctggtcccaaaggagactgtggagaaggaggacctaaagggcttgac
ggagccctgggtagccccggtccctctgggatgcctggtaagaatggtttacctggagag
aatggagagccaggaccgagaggtccaccaggaccaagtggtgccaaaggagatggtggg
cataaaggtctacctggtgtacctggtactccggggcttcctgggccaaaaggacaagtt
ggattatccggtgaagtgggacctcaaggtcctaaaggaatccctggaatggatgggaaa
gcaggatcaattggacctcctggtcttccagggccaaaaggagatagcggactacctggt
caaccaggcattgcaggtgagggaaatccaggtctacctggtcccataggacccccaggc
aaagagggcccatcaggaccccctggtcaaccagggcagcctggccttcctggaccacca
ggtccacctggtgtgtctcctgacatgggtgctgtgctttctgtgatgggccctggacta
gatggtgttaaggctggtagttatggtaagaagggcaagtatggaggcaatggggctgaa
gtaatgggtgccagtgggttggaaatgccagcatttacagcaatagtcacaactccgttt
ccacctgtgggcaccccagttgtttttgacaagctcttgtacaatggtcgccaaaactac
aacccagagacaggtatcttcacctgtgacatgcctggcatttattactttgcataccac
gttcattgcaaaggagctaatgtgtgggtggctttgatgaggaacaatgagccagtaatg
tacacatatgatgaatacaaaaagggtttcctagatcaagcatcagggagtgcggtacta
cctctacaacctggggacactgtatatgttcagttgccctcagatcaggccgcaggactt
tatgctggacagtatgtgcactcctccttttctggttatttgttatatccgatgtaa
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