Etheostoma cragini (Arkansas darter): 117953317
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Entry
117953317 CDS
T07493
Symbol
usp9
Name
(RefSeq) ubiquitin specific peptidase 9 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117953317 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117953317 (usp9)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117953317 (usp9)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117953317 (usp9)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117953317 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
117953317
NCBI-ProteinID:
XP_034742106
LinkDB
All DBs
Position
11:complement(8999477..9045398)
Genome browser
AA seq
2629 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIDMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKSSWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDTSTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDEVTENNFFQASKYIPDIC
VIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFA
LMPTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLL
FTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRT
GETGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQY
MKSGEFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEW
EYLPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGD
EKQENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYV
PRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSRVLGGSFADQKI
CQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKR
LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPE
NQVIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDG
DVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDS
ELVKYISELTISSTKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSV
YLNPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSK
NVRYWFAHKVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGP
STQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVP
ATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDT
NLTAPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELL
WQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQK
RAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNW
SPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAADDQDSSP
PEDTSLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTTPTPGP
GPTPGPGPRAQENWESTEDVAPAPAPAPAPAPAPAPNTSTTPTPAPPKE
NT seq
7890 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacgcgtggctctccggtggggggcaatgacagtcagggccagggccag
gcacctgatgctcagagccagccccccctgccacagaaccagacatcatctccaaactca
tctaatgagaactctccagtaagcccaccagatgaacagggccagggagatggcccccct
cagctggaagaagaggagcccgccttccctcacactgatctagccaagctggatgatatg
atcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtccttttg
gaagctgctattgacttgagtaaaaaaggactggatgtgaagtgtgaggcatgtcagagg
tttttccgagatggtctgaccatctccttcacaaagatcctgacagacgaggcagtcagt
ggctggaagtttgagattcataggtgtatcatcaataacacacaccggttggtggaactg
tgtgtggccaagctctctcaggactggttccctctactggagctgctggccatggccacc
aaccctcactgcaagttccacatctacaatggcacacggccctctgagactgtccccgct
ggagcacagctggctgacgatgagctctttgcccgaccaccagacccacgctctcctaag
ggctggttggtggacttaataaacaaatttggaacgttaaacgggtttcaaatgttgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccagtc
atcgacatggttccccagtttctagagaatcttacagatgaggagctaaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtccctgaagaatctggct
tctcgtgtaccagggcaggaggagaccgtgaagaatttagagatttttagattaaaaatg
attcttaggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaatgaagtt
aacaaggtgatctccagtgtgtcctactacactcatcggcataaccctgaagaggaggag
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccattgtg
ctgagggacagtttgcaccagccgcagtatgtagagaaactggagaagatccttcgcttc
gttatcaaagaaaaagctcttacaatgcaggatctggacaacatctgggcggcccaggcc
ggtaagcacgaggccattgtgaagaatgtccatgacctcctggccaagctggcatgggac
ttctcacctgagcaactcgatcacctttttgactgtttcaagtcaagctggaccaatgcc
agcaagaagcagcgtgaaaaactgctggaacttatccggcgcttggctgaggatgataag
gatggggtgatggcccacaaggtcctcaacctgctgtggaacctggcacacagcgatgat
gtgcctgtagacatcatggaccaggctcttagtgctcacatcaaaatattagattacagt
tgttcacaggacagagacacacagaagattcagtggatagatcgcttcatagaggagcta
cgaaccaatgacaaatgggtgatccctgccctgaagcaaataagagaaatctgtagcctc
tttggagaagcccctcaaaaccttagaaagaaaatgccaattaacatacaaacgaactta
gtgggtcaaacccagagaagtcctcatgtgttttaccgccatgacctgatcaaccaacta
cagcacaaccatgctctggtcacgctggtggctgagaacctctcggcctacatggagacc
atgaggcagttctccaaagaagaacaagcggagtttgacccccagacggtcagaccagga
agccgctacagccatgtacaggaagtgcaggaaagacttaacttcctgaggttcctgctg
aaagatggccagctgtggctatgtgcccctcaggccaagcagatctggaagtgtctggct
gagaacgcagtgtttctgtgtgaccgtgaggcctgcttcaaatggtactccaaactgatg
ggtgatgaaccagatctggacccagacatcaataaggacttctttgagaacaatgttctg
cagctggacccatctctgctgacagagaatggcatgaaatgctttgagaggttctttaag
gctgtcaactgcagggaaggcaagctggtggcaaagcgcagggcctacatgatggatgac
ctggaactaataggcttggactacctctggagggtggtaattcaaggaagtgatgacatt
gccagcagagctatagacctgctgaaagagatctacaccaaccttggaccaaaactgcaa
gtcaatcaggttgaaattcatgaagatttcattcagtcatgttttgaccgtctgaaggcg
tcctatgacaccttgtgtgtgttggatggagacaaagacagcatcaactgcgcccgtcag
gaggctattcgcatggtgcgagttctaactgtgctcaaagagtacatcaatgagtgtgac
agtgactatcacgaggagaggactatactgcctatgtcaagagctttccgtgggaaacat
atcacattgattgtccgtttccccaaccaggggcgtcaggtagatgacttggatatctgg
tcacacactaatgatacaattggctcggttcggcgtggcatcctcaataggatcaaagct
aatgcagcacataccaagattgagctcttcattggtggggaggttgttgatccagctgac
gacaggaagctgattggacagctcaatttgaaggacaaaacgctgatcacggccaagctg
acccaggtgagtgccaacatgccttcaagcccagacagctcttccgactcttccactggc
tctccgggtaaccacggcaaccactacagcgatgggcctaaccctgaggtggagagctgt
cttcctggtgtgattatgtcgctgcatctgcgctacatctccttcctgtggcaggttgct
gacctgggctgcaaccttaacatgccactgcttagagatggagctcgagttctaatgaaa
cttatgcccccagatacctctactgtagaaaatctgagagctgtgtgtctggaccacgcc
aagctcggtgagaacagcctcagtccttcactggactcacgcttcttcggcccctcaccc
tcacaagtgctctacctcattgaggttgtttatgctttgctgatgccagccagtgcaact
ctgggtgaagatgccagcgacttccagtacaactttttaaagagtggtggactgcccctg
gtgttgagcatgctcaccaggaacaacttcctcccatcagcagacatggagacacggcgt
ggggcttacctcaatgcgcttaaaatcgccaagctcctcctcactgctgtaggttttggg
catgtgaaggctgttgctgaggcctgccagcccaacgctgagggaaatatacctgtctca
ccgattaatcaggccactcatgaccaagccctggtcctccagagtgccctgcaaaacatc
cctaatcctgcctcagaatgcatgctgcgcaatgtagccatccgcctggcccagcagatc
tctgatgaagtaacagaaaataatttcttccaggcatcgaagtacatcccagacatctgt
gtgatcagagcagtacagaaaatagtgtgggcatcaggctgtggtacagtgcaactcgtc
ttcagttccaatgaagaaatcagcaagatatatgagaagacaaatgcagctaaggagcca
gatggggaagatgagcaggtgtgttgcgaggccctggaggtgatgacactgtgttttgcc
ctcatgcccacggctctggacactctcagtaaggagaaggcttggcagaccttcatcata
gacttgctgctacactgccacagcaaatctgtgcgtcaaatggcccaagagcagtttttc
ctgatggcaactaggtgctgtatgggccatcgacccctccttttctttatcacccttctc
ttcactgtgctggggagtacagccaaggagcgggccaaacatgctggagactacttcact
ttactcagacatcttctgaactatgcctataacagcaacatcaacctgccaaatgcagag
gtcctgctcaacaatgagattgactggctcaagcggataagggatgaggttaagaggaca
ggggagaccggtgtggaggagaccatcctggagggtcaccttggggttaccaaagagctt
ctagccttccaaacaccagagaagaagtattacattggctgcgagaaaggaggagcgaac
ctcattaaggagctgattgacgacttcatcttcccagcatctaatgtttacctgcagtac
atgaaaagtggggagtttcccactgagcaggccatccctgtgtgtagcacccctgcttct
atcaacgccggctttgagctcctggtagcactggctgttggatgtgttcgcaatctcaag
caaatagttgacaccctgactgacatgtactacttaggttgtgagacactgactgagtgg
gaatacttgcctccggtggggccacgccccaacaaaggctttgtgggtttaaagaatgcc
ggggccacctgttatatgaactctgtcattcagcagctgtacatgattcctccaatccgc
aatggcatcctggccattgagggcacgggcactgatgtggatgatgacatgtcaggggat
gagaagcaggagaatgagagtaacgtggatcctcgtgatgaggtgttcagctaccaccat
cagtttgacgataaaccctccagtaaatcagaggacaggaaagagtataacattggagta
ctacgtcacctacaggtcatttttggacatctggctgcgtccagacttcagtactatgtc
cccaggggattctggaaacagttcaggttatggggtgagccagtgaacttgcgggagcag
catgatgctctggagttttttaactctttggttgacagtctggatgaagctttaaaagcc
ctgggccaccccgccatgctgagcagggtgctgggagggtccttcgctgaccagaagatc
tgtcagggatgcccccacagatatgagtgtgaggagtcgttcacaacactcaatgtagat
atcagaaaccaccagaacctgttggactccatggagcagtatgttaaaggagatctgctt
gagggagccaatgcctaccactgtgagaagtgtaataagaaggtggacacggtgaagcgc
ctgctaataaagaagttgccacctgtcttggccatccagctgaagcgctttgactatgac
tgggagagggagtgtgccatcaagttcaatgactactttgaattccccagggagctggac
atggagccatacacggtagctggtgtggccaagctagagggcgatgacgtcaaccctgag
aaccaggtgatccaacagaatgagccctctgaacccacacctcccggaagttccaagtat
cgtctggtgggagtgctggtccactcaggccaggcgagtggcgggcactactattcctac
ataatccagaggaacggaggcgatggggagaagaaccgctggtataagtttgatgatggg
gatgtgactgagtgcaagatggatgatgaggaggagatgaagaaccagtgctttggaggg
gaatacatgggcgaggtgtttgatcatatgatgaaaaggatgtcgtaccggaggcaaaag
cgctggtggaatgcctacattctattctatgagcgtatggactctttggacaaggacagc
gagctggtcaaatacatctcggagttgaccatctcctctaccaagccacatcaggtcaag
atgcctggtgtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccga
atgcaatacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtc
tatttaaaccctcctccaggacaagaccatcttctgccagaggcagaggagattgctatg
ataagcgctcagctggctgctaggttcctcttcagcacaggttttcacaccaagaaagta
gtacggggtcctgccagtgactggtatgacgccctatgcatcctactgagacacagtaag
aatgtacgctattggtttgcacacaaagtcctgtttgcttaccctaaccggttctcagag
tatctgctagagtgcccgagcgctgaggtccgtggtgcatttgccaagctcattgtcttt
atcgctcacttctccttgcaagacggcccatgcccctcccccaccgcctcgcctggaccc
tctactcagggctgtgataacctcagtctcagtgaccatctgttgagagctgtgctcaac
ctgctcagaagagaggtttctgaacacggccgtcacctgcagcagtactttaacctcttt
gtcatgtatgccaatctgggcctggcagaaaagacccagctgttgaaactgaatgtccca
gccactttcatgttggtcgctctggacgagggtcccggccctcccattaagtatcagtac
gctgagctgggcaagctctacactgtggtctcccagctggttcgttgctgtgacgtctct
tcacgcatgcagtcctcaattaatggtaaccctcctcttcctaacccgtatggtgatacc
aacctgacggccccagtgatgcctgtgcaacagctggtagcagaaatcctgtttgtgagg
accagttacgtgaagaagataatcgaggactgcagcaactctgaggagacagtgaagctg
cttcgcttcagctgctgggagaaccctcaattctcctccactgtgctcagtgagctgctc
tggcaggtggcgtactcctacacctatgagctgaggccttacctggacttgctgctacag
atcctactcattgaggactcctggcagacacacaggatccacaatgtgctaaagggcatt
cctgatgacagagatgggctctttgacaccatccagcgctccaagaaccactaccagaaa
cgagcctaccagtgcattaagtgcatggtggccctcttcagcaactgctccgtggcctac
cagatcctacagagtaatggtgacctgaaaagaaaatggacgtgggcagtggagtggtta
ggggacgagctggagaggaggccatacacagggaatccccagtacacctacaacaactgg
tcccctccggttcagagcaatgagacctccaacggctatttcctggagcgttcgcacagt
gcacgtatgacccttgccaaggcctgtgaactttgtcccgaggagctcaagtgtactcag
ggaagcccagggaaggagccagatgaacaggaagcagcggatgatcaagactcttcccca
cctgaagacacctctctgtacccacactctcctggaaccacacagtttcagcagaacaac
cacccccatgggcagccgtacactgggcctgctgctcagcacatgaacaaccctcagcgt
cctggtcctgcctctgctccgactccaggcccgacccagaccacccccaccccaggccct
ggtcccactcctggcccaggcccacgagcacaagagaactgggagagcaccgaggacgtg
gcccctgcccctgccccggccccggcccctgccccagcccccgcccccaacacctctact
accccaacgcctgccccgcctaaggagtaa
DBGET
integrated database retrieval system
