Etheostoma cragini (Arkansas darter): 117953348
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Entry
117953348 CDS
T07493
Symbol
appb
Name
(RefSeq) amyloid beta (A4) precursor protein b isoform X1
KO
K04520
amyloid beta A4 protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117953348 (appb)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ecra00535
]
117953348 (appb)
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117953348 (appb)
Peptidases and inhibitors [BR:
ecra01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117953348 (appb)
Proteoglycans [BR:
ecra00535
]
Cell surface proteoglycans
Others
117953348 (appb)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Others
117953348 (appb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117953348
NCBI-ProteinID:
XP_034742158
LinkDB
All DBs
Position
11:11923654..11938802
Genome browser
AA seq
753 aa
AA seq
DB search
MGELTAFLLLLVATLTLSSEVPADDSVSLLTEPQVAMFCGKLNMHINVQSGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQNWCKKGRKQCRTHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPAEAERESDSTELEGEESDVWWGGAETEYSDNSMSRPADTEPVIAEDEEDED
EDTETFERDENGDGNEGEDDEEDDDDMTNERDSDEHNANIAMTTTTTTTTESVEEVVRAV
CWARAESGPCHAMLERWYFVPEKGSCVPFLFGGCGGNRNNFGSEEYCLAVCGSSLPTMAP
SPPDAVDQYLESPGDDNEHSDFQKAKESLEAKHREKMSQVMREWEEAERQTKNLPRADKK
AVIQHFQEKVEALEWEAAGERQQLVETHMARVEALLNSRRRLALENYLTSLQANPPQARQ
VLSLLKKYVRAEQKDRQHTLKHYEHVRTVDPKKAAQIRPQVLTHLRVIVERMNQSVGLLY
KVPSVANEIQNQVSVIMQRVQSELSQQVSSLQSDGRVDGRVSYGNDALMPDQAYSSAPMY
PGLDEQGSIHPESFNQPNTDNHVEPVDARPFPDRGLPTRPVSALKPEEMPKVRTETEEEQ
SVGYEVYPQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIE
VDAAVTPEERHLAKMQQNGYENPTYKFFEQMQN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcttacggcgtttctgctgttactggtggcgaccttgacgctttcatccgag
gtgcctgctgatgactctgtgagtttgctaactgagccccaggtggccatgttctgcggg
aagctcaacatgcatattaatgtgcagagtggcaaatgggagtctgacccctccggcacc
aagagctgcatcggcaccaaggagggcatcctgcagtactgccaagaggtgtacccggag
ttgcaaatcacaaatgttgtggaggccaaccagcccgtcagcatccagaactggtgcaag
aaaggccgcaagcagtgccgcactcacactcacattgtggtgccataccgctgcctggtt
ggggagtttgtgagcgatgccctgcttgttcctgacaaatgtaagttcctgcaccaggag
cgtatggaccagtgtgagagtcacctgcactggcacactgtagccaaagagtcctgtgga
gaccgctctatgaatctccatgactacgggatgctgctgccatgtggtattgaccgtttc
cgaggggtggagtttgtctgctgtccggcggaggcagagcgagagtcagacagcacagag
ctagaaggggaggagtcagacgtctggtggggcggagctgagaccgaatactctgataac
agcatgtctcgcccggcagacacagagccagtcatcgctgaggatgaggaagatgaggat
gaagacacggagacttttgaaagggatgaaaatggagatggcaacgaaggggaagatgat
gaagaggacgacgatgacatgaccaatgaacgggatagcgatgaacacaacgctaacatt
gccatgacaaccaccaccaccaccaccactgaatcagttgaggaagttgtgcgcgctgtt
tgttgggctcgtgctgagtcaggcccatgtcatgccatgctggagcgctggtacttcgtg
cccgagaagggcagctgtgttcccttcttgtttgggggctgtgggggcaacaggaataac
tttggctcagaggagtactgcctagctgtctgcggcagctcgttgcccaccatggcccct
agtcctccagacgccgtggatcagtacctcgaatctcccggcgacgacaatgaacactct
gacttccagaaggccaaggaaagcctggaggccaaacaccgggaaaagatgtcccaggtg
atgagggagtgggaagaggcagagaggcagaccaagaaccttcctcgtgctgacaagaag
gctgtcatccagcacttccaggagaaggtggaggctctagagtgggaggcagcaggggag
aggcagcagctggtggaaacacacatggcccgggtggaagctctgctcaacagtcgccgg
cgcctggctctggaaaattacctcacttccctacaggcaaaccctccacaggctcgtcag
gtgttgagcctgctgaagaagtacgtccgtgcagagcagaaggacaggcagcacacactg
aaacattacgagcatgtccgcacggtcgatcccaaaaaggcggcacagatccgacctcag
gttttgacccacctacgcgtaattgtcgagaggatgaatcagtctgtcggtctgctctac
aaagtgcccagtgtggcgaatgagatccaaaaccaagtctctgtgataatgcagagagtt
caatctgagctgtctcagcaagtctcttccctgcagagtgatgggcgggtggacggcagg
gtgagttacggtaacgacgctctgatgcctgatcaggcctacagctctgctcctatgtac
cctggcctggacgaacagggctccatccatcctgagagcttcaaccagcccaacacagac
aaccacgttgagcctgttgatgcgcgtccatttccagataggggactccccacacgacct
gtatctgccctaaagccagaggagatgccaaaagtgcggacggagactgaagaggagcaa
agtgttggttatgaagtttaccctcaaaagctggtgtttttcgctgaggatgtggggtcc
aataaaggtgccatcattggacttatggttggaggggttgtcatagcaactgtcattgtc
attaccttagtgatgctgaggaagaaacaatatacttccattcatcacggtgtaattgag
gtggatgcggcagtgacaccagaggagcgtcatctggccaagatgcagcagaacggttac
gagaatcccacctacaaatttttcgagcagatgcagaactaa
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