Etheostoma cragini (Arkansas darter): 117953350
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Entry
117953350 CDS
T07493
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117953350 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117953350 (pou2f1b)
03021 Transcription machinery [BR:
ecra03021
]
117953350 (pou2f1b)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117953350 (pou2f1b)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117953350 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
T6_Ig_like
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117953350
NCBI-ProteinID:
XP_034742164
LinkDB
All DBs
Position
11:complement(11673032..11694079)
Genome browser
AA seq
713 aa
AA seq
DB search
MADGGAASQDECSGPDAKVNNQSETTKCAMESGDGNTGIQINGFDFQRQTVPTTSAITNA
HAQALLQQSKSEDSSALPTSVQQSVLPQTQLMLAGGQIAGLTLTPAQQQMLIQQAQAQLL
AAAVQHSANQQNSTTGASISASAATPITQLPLSQPIQIASQLQQQNLSLPQFVLVQPGHS
IATQLQPAQFFISQTPHGQQGILQAQSLLTQLPQSQANLLPTQPCITLATQPATPTRTTA
ATPIQSLPHSQTPPKRLDTPTMEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLY
GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLTSDQALSSPSALCSPGMG
IEGINRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRR
QKEKRINPPSSCNSGGGGTPIKTLFTPSSPLVASTASLVSSSTINTPTTLTVNPVMPLTS
TSVSSLSFTGTTVGATNTASVISTAPLMTTASSPSLSPSPTTIHSSTESKAQTIVTQAPT
SIATSLGTGQLMVTASGLSAALQGAQLPSGFAAMAAAAAGLNPGLMSSQFASGGALLSLA
SGGLGSPAFMSNNTLATIQGVYQSLASGGTIPITSLDGGNLLFANTSAGNTPNLVTTPLF
LNPQNLSLLTSNPVSLVSAGAGGLQVTADAHHQATTAAVPVQASTITTASKAQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagtgttcaggaccagatgctaaagtgaat
aatcagtcagaaactactaaatgtgcaatggaaagtggtgacgggaacaccggaatccaa
atcaatgggtttgactttcagaggcagacggtgccaaccacaagtgcaatcactaatgca
catgcacaagccctccttcaacagtcgaagtcggaagactcgagtgctcttccgacctcc
gtccagcagagcgtattgcctcaaacccagctcatgttggccggaggacagattgcagga
ttgaccctgaccccagcgcagcagcagatgttgatccagcaggcccaagctcaactccta
gctgctgccgtgcagcattcagctaaccagcagaacagcaccactggggccagcatctcg
gcgtccgcagccacacccattacccagctgcccctgtcacagcccatccagatcgcttct
cagctacagcagcagaatttaagtctgcctcagtttgttctggtgcagcctggccactca
atcgccacacaactgcagcctgctcaattcttcatctcccagacaccgcatggccaacag
ggcatattgcaagcccagagtcttctaactcaactacctcaaagccaagctaacctcctg
ccgactcaaccatgcatcacccttgctactcagcctgccactccaacccgcacaacagca
gccacacctattcagtccctgccccacagtcagacaccacccaagcggttggataccccc
actatggaggagcctagcgatctggaggaactggaacaatttgccaagaccttcaaacag
aggcgtattaaactgggcttcacgcagggcgatgttggcctggccatggggaagctgtat
ggaaacgacttcagccaaactaccatctctcgctttgaggccttgaatctgagctttaag
aacatgtgcaaactcaagccattgctggagaagtggctcaacgatgcagtttgtgcagag
aacctgacatctgaccaggccctgtccagccccagtgccctgtgctccccaggcatgggc
atagaggggatcaatcgcagacggaagaagaggaccagtattgagaccaacatccgagtg
gccttagaaaaaagctttctggagcagaaccaaaaacctacctctgaagagatcaccatg
atcgctgaccagctcaacatggagaaggaggtgatccgggtctggttctgcaatcgccga
cagaaagagaagaggattaacccccccagcagctgcaacagtggcggaggtggcaccccc
atcaaaaccctctttacccctagtagccctttggtggccagcacagcaagccttgtgagc
agttcaactattaacacacccaccactctgactgtaaacccagtgatgcctctcaccagc
accagcgtctcaagtttgtctttcacaggcacgacagttggagccacaaacactgcatcc
gtcatatccactgcacctttgatgactacagccagctctccatctttgagcccgtcgcca
acgactattcactcttcgacagaaagcaaggcgcaaaccatcgtcacccaggcaccgaca
tccatcgctactagtttagggacgggtcagctgatggtgacagcgtcagggttgtccgcg
gcgctgcagggggcccagttacctagcggctttgctgctatggccgctgctgctgctggg
ctcaacccaggactgatgtcctcccagtttgcctcagggggggccctgctcagtctggcc
tctggtggcctaggtagtcctgccttcatgagcaacaataccttggctactatccaaggt
gtatatcaatctctggcatcgggcggaacgatccccatcacttctctggatggtggcaac
ctgctgtttgccaacacgtctgctggtaacacgcccaacctagtgaccacgccgctcttc
ctgaacccccagaacctgtcgctgctcaccagtaaccccgtcagcctggtgtcggccggg
gcgggggggctgcaggtcactgctgatgcccatcatcaagcaaccacggctgctgtgcct
gtgcaagcctcgaccattaccactgcctccaaggctcagtga
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