Etheostoma cragini (Arkansas darter): 117953386
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Entry
117953386 CDS
T07493
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04060
Cytokine-cytokine receptor interaction
ecra04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117953386 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117953386 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecra04052
]
117953386 (tnfsf13b)
04090 CD molecules [BR:
ecra04090
]
117953386 (tnfsf13b)
Cytokines and neuropeptides [BR:
ecra04052
]
Cytokines
Tumor necrosis fators
117953386 (tnfsf13b)
CD molecules [BR:
ecra04090
]
Proteins
117953386 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
117953386
NCBI-ProteinID:
XP_034742247
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All DBs
Position
11:complement(12338822..12342356)
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AA seq
256 aa
AA seq
DB search
MACVEPGIGKRTGEGRLSWPVFLLTLAAVTSSSLSALSLYQLVALRAEVEGLKAEVCRKR
EEGREAKHAGQTENINWRSSQESLHQPGSQKTFTLIRRRRLVSGSEKMVSQPCLQLLANN
SRKTFRKEYNAEPHTGIPWQAGLSRGSALEKDRDSMLVREEGFYFVYSQVYYMDSTFAMG
HVVIRRKRNVVGDEPQYVVLFRCIQNMNPVHPYNTCYTGGIVKLEVGDHLELLIPRSTAN
VSLYGDATFMGAVKLA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgtggagccagggattggaaaaaggaccggtgaagggaggctgtcctggccg
gttttcctgctgacgctggctgctgtcacctcctcttctctttcagctttgtccttgtac
caactggtggccctcagagctgaggtagagggtctcaaagcagaggtctgtcgcaagaga
gaagaggggagagaggccaagcacgcaggccagactgagaatatcaattggagaagcagc
caagagtccctgcaccaacctgggtctcaaaaaactttcaccctgatacggaggagaaga
ttggtctccggatcagagaaaatggtttctcagccttgcctgcagttgctggcaaacaat
agcaggaaaaccttccggaaagaatataacgcggagccgcacacaggtatcccctggcag
gcaggtctgagcagaggctctgccctggagaaagacagagacagcatgttagtcagagag
gagggcttctactttgtgtacagtcaggtctactacatggacagcacctttgcaatgggt
cacgtggtgatccggaggaagaggaatgtggtgggagatgagcctcagtatgtggtcttg
ttccgctgcatccagaatatgaaccctgttcacccttacaacacctgctacacaggaggt
attgtgaagctggaggttggggaccacttggagctgctgatccctcgttccacagccaac
gtgtccctttatggagatgccacctttatgggtgctgtaaaactggcttag
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