Etheostoma cragini (Arkansas darter): 117953388
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Entry
117953388 CDS
T07493
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117953388 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117953388 (u2af1)
Spliceosome [BR:
ecra03041
]
Complex A
U2 snRNP components
U2 related factors
117953388 (u2af1)
Complex B
117953388 (u2af1)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117953388
NCBI-ProteinID:
XP_034742250
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All DBs
Position
11:11950286..11956146
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AA seq
247 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGGGGGGGRDHERRRSRD
RERSGRF
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcgtccatttttgggacagagaaagataaggtcaactgctctttt
tattttaaaattggtgcctgccgacatggcgaccgctgctccagattacacaacaagccg
acattcagccagacaattgccctcctgaacatttaccggaaccctcagaatagtgcccag
tctgctgatggtcttacctgtgccatcagtgacatggagatgcaggagcactatgatgag
ttttttgaggaggtcttcacagagatggaagaaaagtacggagaggtggaggagatgaac
gtgtgtgacaacctcggggaccacctagtaggaaatgtgtatgtgaagttccgttatgaa
gaggacgcggagaaggctgtgatagacctgaataatcgatggtttaatggacagcccatc
catgctgagctctctcccgtcacagacttcagagaagcttgctgtcgccagtatgaaatg
ggggaatgcactcgtggtggtttctgcaacttcatgcatctgaagcccatctcgcgtgaa
ttgaggagagagctttatgggcgtcggaggaagggccgtcataggtcccggtctcgctca
agagagaggcgatctcgctcaagggacagaggtcgaggaggtggaggtggaggaggagga
ggaggaggaggtggaggaggaggaggtggccgtgaccatgagagacgtcgctccagagac
agagagcgttcgggacgattctga
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