Etheostoma cragini (Arkansas darter): 117953389
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Entry
117953389 CDS
T07493
Symbol
lamp1b
Name
(RefSeq) lysosome-associated membrane glycoprotein 1b
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03272
Virion - Hepatitis viruses
ecra03273
Virion - Lassa virus and SFTS virus
ecra04140
Autophagy - animal
ecra04142
Lysosome
ecra04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117953389 (lamp1b)
03272 Virion - Hepatitis viruses
117953389 (lamp1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117953389 (lamp1b)
04142 Lysosome
117953389 (lamp1b)
04140 Autophagy - animal
117953389 (lamp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117953389 (lamp1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117953389 (lamp1b)
04090 CD molecules [BR:
ecra04090
]
117953389 (lamp1b)
Membrane trafficking [BR:
ecra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117953389 (lamp1b)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117953389 (lamp1b)
Other autophagy associated proteins
RNautophagy/DNautophagy
117953389 (lamp1b)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117953389 (lamp1b)
CD molecules [BR:
ecra04090
]
Proteins
117953389 (lamp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
117953389
NCBI-ProteinID:
XP_034742252
LinkDB
All DBs
Position
11:complement(11658054..11663491)
Genome browser
AA seq
247 aa
AA seq
DB search
MKQIDGLQSWCLGVTLQLIIAAVLHQGFATVAPPTAAPYKDPGRPEKGNYQVNGTNGTAC
LLASMGLQLNITFNSVSQNKTVQDVVNIQPNVTKYSGSCDPDNATLNLSMDAEKTNLIFF
FTLNTTSNKYHLSEVSLSAAWPDMKEPFSARNSSLNYLQGTLGYSYLCREEQTLNVDQYL
SINIFQVQVQPFGLTKDQFGAAEECQLDEDDMLIPIIVGAALAGLVLIVLLAYLIGRKRS
HAGYQTI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagatcgatggtttgcagtcatggtgcctaggagtaacgttacagctaattatt
gctgccgtcctgcatcagggttttgctactgttgcgccgcccacagctgcaccgtacaaa
gaccctggcagacctgagaaaggaaactaccaggtcaacggcaccaacggtactgcctgt
ttactggcatccatgggtctccagctcaatatcaccttcaactctgtctcccagaataag
actgtgcaggatgttgtgaacattcagcccaatgtgacaaagtactctgggtcatgtgac
ccagacaatgcaactctaaatctctcaatggatgcagagaagaccaaccttatctttttc
ttcacactgaatactacttccaataagtaccacctgagtgaagtttctctgtcagcagca
tggccagacatgaaagaacccttctcagcccgtaacagcagtctgaactacctgcagggc
accctggggtactcatacttgtgccgtgaggaacagactctgaatgtggaccaatatttg
tccatcaacatcttccaggtgcaggtgcagcctttcggcctcaccaaagatcagtttgga
gcagctgaggaatgccagttggatgaagatgacatgttgatccccatcatagtcggagcg
gctttagcaggtctggtcctcatcgtgctcttggcctacctcattggcaggaagaggagc
catgctggctaccagaccatctga
DBGET
integrated database retrieval system
