Etheostoma cragini (Arkansas darter): 117953443
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Entry
117953443 CDS
T07493
Symbol
rnf17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117953443 (rnf17)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117953443 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117953443
NCBI-ProteinID:
XP_034742349
LinkDB
All DBs
Position
11:complement(7113106..7144352)
Genome browser
AA seq
1594 aa
AA seq
DB search
MMDRVGNPSAVTCTLCGEAYILPEDEVDGNLPRVLLCAHIYCTSCLLSIQCDSVIRCPEC
EVESNLPEGGVFGLQEDSRIIGLIYTSKMNKMKRCERLKNRKRNKLSPSTDVNANTKHVE
QPADIKDIEKAVDEALVQAAENYALLEHIHESLMTGLAEKSKRERARLEIEIKQAADKAL
HAVQKWGNEQLQKLEEQFSTSQAQVGCVQERMKALDIAMKMAREVRRVPFLEQYCSLDKV
LETLHSPVDNKSFDIKCITMDSGMSCVFLSECENQSLSLSLKMEVTNPKNLSESPPTDVQ
DGNFNRKSPRQRAKGSNKNCILPSCKKFPTPQTQEQECAGANNVLLQGSTPSPTPRHWPN
LSRHNTFSDHETPDVIVEELIINEQENALPPTSPELANDNWRSHKGRKNLMLSNKRNGTQ
WVVVTHIVNPNHFYVRYLAEKKDSEILSKKIQSFCNERSSYFTSSHTVETGSMIFAKCKE
EHWCRASVAEVLRKGCVEAVKACPATQLTSIRVFFLDYGYCKIITIQSEEGNTESTLKAV
NNCLRKVDEWVNVELQHFVPQAIRCSLKDLVPYDLTKGWSNEAQVEFQSVVGSAAVELRP
LGQDRDSLLVDLRKVSMDQSSALPISVREFLVFIEVARFYSPVKLGRRPLLYYPRDYPKF
NTELNAVVSHINNPSDFYIQLVDNMESLLLTTKLQECYNATRVAGEDDLNIYCPVIKQAC
VARYGDKLWYRARVIGHPGGRKVEVQYVDFGNKDILSVSDIRKIKDEFFALPSMAIHCSL
SDVIPLDGKTWSDACCNRFVSLAHQKPVTIVATGRAPKTEPLPVKLFESGLNGPLANIAG
LLVTEELASFKEGLESKDNRLPGDESAIWDPPLELGNTCGVDDPDQKRTEKLCEEPLEVQ
CQLKLPDQLKDLKVTVSHVNSPSSFYVQLSQYNSQLKRMCELVKESAQMEPQDVVWKADM
SCAAHINGVWERGRICADVTSSNIAEVMRCDHGNMVKLDVSCLRPLPLSLKGSLALECTL
TDIRPAGGRSTWTATACDMFSNYLTGASAVMTIKEFTDVRPVPVTLFCPNRMGQLVSIAD
FLASEGLALKERKPRDAVIQKSKETDPKSAVSKTKTNGSDDENKNTPPAPLLSSPSSSSL
NFTPTLPIPTPRTIMSAQKVQTQLYQPPELPCLSHIKITVTAIGEDGLIYTRTQNAEYQL
DLLQEKIQQNMKTLPKQKPYTWKSVLGCSVIGPDMLWYRGQLLEVLGGHVKVQYVDYGLV
ESIPVVHVYPRLLCDDIPQLCIPCQLHSINPVGGKWQRDAVALLREVLLNRSVDMQVMEL
PTDPRGPLKVELFLDRLSLSRILCHHEHASIDRTVVAQEHAETSPALLLDDWDINTEGLE
DPEEQMLGPFIQPNLPLEGEQFQVRVKHVWTPNELFLWPLEGEADLEVDGETLEEALDRI
NAKRYSLQRLTNFCHGSPCLAEYSDGKYYRAKLIKFTSVEPLLLLVQHVDFGSDDTLPTS
KLRQMPAELLRFPSHALKVKVAGFKAPIVNKHEQVLPYSPGWSVKAAMDMIDMLHGCITA
SVVARDPELTVLLYNEKQELVHLPLVSSGLAELD
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagagtcggaaaccccagcgctgtgacttgcacattgtgtggcgaggcatat
attctgcctgaggatgaagttgatggcaacctccctcgtgtgcttttatgtgcccacatc
tactgcacatcttgcctgctgtccattcaatgtgacagtgtcattagatgtccagagtgt
gaggttgagtcaaaccttcctgaaggtggggtgtttggcctgcaggaagatagcagaatc
attggcctcatctacacttctaaaatgaacaagatgaaaaggtgtgagagattaaagaat
cgtaaaaggaacaaattatcaccatccacagacgttaacgccaataccaagcatgtggag
cagccagctgatattaaggacattgagaaggcggtggatgaggcgttggtccaagctgca
gaaaattatgcccttctggaacacatccatgagtctctgatgactggcctggcagaaaag
tcgaagagagagagagcacggttggagattgagatcaagcaagctgcagacaaggcttta
catgctgttcaaaagtggggaaatgagcagctgcaaaaactggaggaacaattctccacc
agccaagcacaggtaggctgtgtccaggagaggatgaaggccctggatattgccatgaaa
atggccagagaagtacgccgtgtccccttcctggagcagtactgttctctagataaggtt
ctggagacgttgcattctcctgtggataacaagtcattcgatatcaaatgcattactatg
gattccggaatgagctgtgttttcttgtcagaatgtgagaaccagagtctgtcattgtct
ctgaagatggaagtcaccaacccaaagaacttgtcagagtctccacccacagatgtccag
gatggcaacttcaacagaaagtcccccaggcaacgtgcaaagggcagtaataaaaactgt
atcttacccagttgcaaaaagttccccaccccacaaacccaggagcaggagtgcgcggga
gctaacaatgtgttgttgcaaggctccactccaagccctacacctcgtcactggcccaac
ctttctcgccacaacacgttctcagatcatgaaactcccgatgttattgttgaggagctt
ataatcaatgaacaagagaacgctctcccacccactagccctgagctggctaatgataat
tggagaagccacaagggaagaaaaaatctgatgttgagcaataagagaaatggcacacag
tgggtggttgttacccacattgtgaatccaaatcacttctacgtccgctacttggccgag
aagaaggacagtgagatcctatctaagaagatccaatccttctgcaatgaacgcagttca
tacttcacttctagtcacacggtggagaccggctccatgatctttgcaaagtgtaaagag
gaacactggtgccgggccagtgtggcggaagttttgaggaaaggatgtgtggaggctgtg
aaagcctgcccagccacccaacttacaagtatccgagtcttcttccttgactatggatac
tgcaaaatcatcaccatacagagtgaggagggaaacacagagtctacactgaaggctgtt
aataactgcctgaggaaggtggatgaatgggtgaatgtagagctgcaacactttgttccg
caagcaatcagatgttcactcaaggacctggtcccctatgacctgactaagggctggagt
aatgaggcgcaggttgaatttcaaagtgtggttggctctgcagcagtggagttgcggcct
ttgggtcaggacagagactctttattagtggacctaaggaaggtttccatggatcaatca
agtgctctgcccatttctgtcagagagttccttgttttcattgaagtggccaggttctat
tctccagtgaagttgggcaggaggcccctgctgtactaccctcgtgactatcccaaattc
aacacagagctcaatgctgtggtgtcccacatcaacaacccttctgacttctacatccag
ctggtggataacatggagtctttgttgctcaccaccaagctccaagagtgttacaatgcg
acaagagtagctggagaagatgacctcaacatctactgccctgtgatcaaacaggcctgt
gttgcccgctatggcgataagctgtggtacagagctcgagtcataggtcatccagggggc
agaaaagtggaggtgcagtatgttgactttggcaataaagatatcctgtcagtcagtgac
ataaggaagatcaaggatgagttctttgcccttccttccatggcaatccactgctctttg
tcagatgtgattcctttggatggcaagacatggagtgatgcctgctgcaacagatttgtc
agcctagctcaccagaaaccggtcactatagtggccacaggaagagcccccaagactgag
cctctgccagtcaaattgtttgaaagtggcctaaatgggccactagccaacatagctggg
ctgctggtcacagaggagctggcttccttcaaagagggacttgagtccaaggataacagg
ctacctggggatgagtctgccatatgggaccctccacttgagcttggcaacacatgtggc
gttgatgacccggaccaaaaaagaactgaaaagctgtgtgaggaaccgctggaggttcag
tgtcagctgaagctccctgatcaactgaaagacctaaaggtcacagtcagccacgtcaac
tcgccaagcagcttttacgtccagctaagccagtacaactctcaactcaaaaggatgtgt
gagctggtgaaggagagtgcacaaatggagccccaagatgtggtgtggaaagcagacatg
tcctgtgctgctcacattaacggggtttgggagagaggacggatctgcgctgatgtcaca
tccagcaacattgcagaggtgatgcgctgtgatcatggcaacatggtgaagctcgacgtt
agctgcctgcgtcccctgccgttgtccttgaagggttctctggcattggagtgcactctc
actgacatcaggccagcaggaggcagatccacctggacggctacagcctgcgacatgttc
tccaactacctgactggagcctcggctgtcatgaccatcaaggagtttacagatgtgcgt
ccagtacccgtcacactgttctgccccaacagaatgggacagttggtcagcattgcagat
tttctggccagtgaaggcctcgccctcaaggaaagaaaaccaagagatgctgtaattcaa
aaatccaaagaaactgatccaaagtctgcagtgagcaagactaaaacgaatggctctgat
gacgagaacaaaaacactcccccagctcctctcctttcttcaccctcctcatcctctctc
aacttcactcccactctaccaataccaaccccccgcaccattatgtctgctcagaaggtg
cagactcagttgtaccaacccccagagctgccatgcctcagtcacatcaagataactgtt
actgccatcggagaggacggtctcatttacaccagaacacagaatgcagagtatcagctg
gacctgcttcaggagaagattcagcagaatatgaagacattgcctaagcagaagccatac
acctggaagtcagtccttggctgttccgtcattggacctgatatgctgtggtatcgagga
cagctgctggaggtgctgggaggacatgttaaagtacaatatgtggactacggcctggtg
gagagcatcccagtggtccatgtgtaccccaggctgttgtgtgatgacattcctcagctc
tgtataccctgccagctgcacagcatcaaccctgttggtggaaagtggcagcgggatgcg
gtggccttgctgagggaggtgttgttgaaccgctctgtggacatgcaagtcatggagctg
ccgactgacccaaggggacccctcaaagttgagctcttcctggacaggctgagcctcagc
aggatcctgtgccaccacgaacatgcttccattgaccggactgttgtggcacaggaacat
gcagagacgtctcctgccctcctcctggatgattgggacatcaacactgagggtctagag
gacccagaggagcagatgttggggccctttatccagccaaatctgccactggagggagag
cagttccaagtcagggtcaagcacgtatggacccccaacgagctgttcctgtggcctttg
gagggggaagctgacttggaggtagatggagagactctggaggaggctctagaccgaatc
aatgcaaagcgctacagtctgcaacgactcaccaacttttgtcatggcagtccctgtttg
gcagagtacagtgatgggaagtactatcgggccaagctgatcaaattcaccagcgttgag
cctctcctgctgctggtccagcatgtcgactttggttctgatgacactctgcccaccagc
aagctgcgtcagatgccagctgaactgctaagatttccatcgcatgccctcaaggtcaaa
gttgctgggttcaaggctccgattgtgaacaagcatgaacaagtgctgccctacagcccc
gggtggagcgtgaaagcggcaatggacatgatcgacatgttacacggctgcattacagcc
tctgttgtggcccgggacccagaactcacagtgcttttgtacaatgagaaacaagagttg
gtccatctgcctctcgtgagcagcggactggctgagttggactga
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integrated database retrieval system
