Etheostoma cragini (Arkansas darter): 117953466
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Entry
117953466 CDS
T07493
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117953466 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117953466 (xrcc5)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
117953466 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
117953466
NCBI-ProteinID:
XP_034742435
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Position
11:complement(16829419..16838368)
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AA seq
721 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFDLAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNPLDKDDQYQNITVHRHFMVPDFELLEEIENQIHPESQQADWLDALVVCMDLLQTAT
KEKKCDRLNIVFLTDLNTEASSEQLDVIIKNLKKAGITLQFFLPFSVDDEEGGGDADGRD
PGQPGTGKGLSQEQKRGLDMVKHIMLSLDEEDGLEEIYSFSKAIEQLCMFKRIERRPMAW
PCQLTIGSCLPIRIVGYKAVTEEKLKKTWTTVDAQTNQKEDVKRETVYCLDDDNETEVQK
DDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFSKQNMVRRHQFMGTQVIKIFPA
KDDEHAGVALSALIRALDELNMVAIVRYAYDRRSNPQVGAAFPCIKRDYECLMYVQLPFM
EDLRHFVFPSLANNKKFAPSDNQLAAVDSLIDSMMLVAGDDQKDLFKVHHIPNPAFQRHF
QCLHHRAVSPGTPLPPMEPWLKAALERPDVISERCQAPLEEIKRKFPLTEVEKKKELKTS
AQIFGKDSEEPDAKKAKGDEEEDEYSLADIAEGSVTSVGSVDPARDFRTLIKKKSLPFGE
VCQQLTRRIEQLLSNKNTHYYMKSITCIQAFREQSIKLGDANLYNGYLQSLKRSIPNRGL
EVFWDLLLQDAITLISKDEVEGSTVSKNEANQFLVTEEKKEEAAAPQVEDTGDVDDLLDM
M
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgccaaatcagcattggtgttgtgcatggatgttgggttctccatgtccaac
tctgccccgggcgaagagcctccctttgatcttgccaaaaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagaccaaggatgaactggcgttagttctgtttggcacagac
tccaccaagaacccactggacaaggatgaccagtaccagaacatcactgtgcatcgtcat
tttatggtgcctgattttgagcttctggaggaaatagaaaatcagatccatccagagagt
cagcaggctgattggctggatgctcttgttgtgtgtatggatcttcttcagactgcaaca
aaggaaaagaagtgtgatcgtctcaacattgttttcttgactgacctgaacactgaggcc
agctcagagcagctggacgttattattaaaaacctaaaaaaagctggcattaccctgcag
ttttttttgcctttctctgtggacgatgaggagggtggaggagatgcggatggaagagac
cctggtcagccaggcacgggcaaaggtctatcccaggagcagaagaggggcctggacatg
gtgaaacacatcatgctaagcctggatgaggaggacggcctggaagaaatttactccttt
agtaaagcaattgagcagctgtgcatgttcaagcgcatcgagaggagacctatggcctgg
ccctgtcagctgaccatcggcagctgtctgcccatccgtatcgttggatacaaagcagtg
acagaagagaaactgaagaaaacgtggactacagttgatgctcaaaccaaccagaaagag
gacgtgaagagagagactgtctactgtctggatgatgacaatgagacagaggtgcagaag
gatgatactatccaaggttttcgttacggaagtgatattgttcccttctccaaagtagat
caagaccagatgaaatacaaacatgatgggaagtgctttgctgttctcggcttctcgaaa
cagaacatggtacgacgccatcagttcatggggactcaagtcatcaagatatttcctgcc
aaggatgacgagcatgcaggagtggcgctgtctgctctcatccgagcgctagatgaactc
aacatggtggccattgtacgttacgcttatgaccggcgcagcaaccctcaagtaggagca
gccttcccttgcatcaagcgggactatgagtgtctgatgtacgtccagctgcccttcatg
gaagacctcagacattttgtatttccttctcttgcaaacaacaaaaagttcgctccatca
gacaaccagctggctgctgttgactctcttattgactccatgatgttggtagcgggggat
gatcaaaaggacttgttcaaggtccaccacattcccaaccctgccttccagaggcacttc
cagtgtctgcatcatcgggcagtaagccccggcacccctcttccccccatggagccatgg
ctgaaggctgctcttgagcgccctgatgtgatcagtgaacgttgccaggctccactagag
gagataaagaggaagtttcctctgaccgaagtggagaagaaaaaggagctcaagactagt
gctcagatttttggcaaagactctgaggagccagatgccaagaaggcaaaaggggacgaa
gaagaggacgagtatagcctggctgacattgccgaaggctctgtgacttcggtgggaagc
gtggatccagccagagacttccgtactctgataaaaaagaagagtctgccatttggagag
gtctgtcagcaactgactcgcaggatagagcagttgcttagcaacaagaacacacactac
tacatgaaaagcatcacctgtatccaggcttttagagagcagtccattaagctgggggat
gccaatctgtacaatggctaccttcagtccctgaaaagaagcattccaaacagagggctc
gaggtcttctgggacctgcttcttcaagatgccatcactctgatcagtaaagacgaggtt
gaaggaagcactgtatccaaaaatgaagctaatcagtttctggttactgaggaaaagaaa
gaagaggcagctgcgccacaagttgaagatactggagatgttgatgacttgctggacatg
atgtaa
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