KEGG   Etheostoma cragini (Arkansas darter): 117953532
Entry
117953532         CDS       T07493                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF3-like isoform X1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ecra01009]
    117953532
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecra04121]
    117953532
Enzymes [BR:ecra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117953532
Protein phosphatases and associated proteins [BR:ecra01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117953532
Ubiquitin system [BR:ecra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117953532
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf-RING_11 RING_XB3-XBAT31 zf-C3HC4_4 Prok-RING_4 zf-rbx1
Other DBs
NCBI-GeneID: 117953532
NCBI-ProteinID: XP_034742557
LinkDB
Position
11:complement(18515212..18603825)
AA seq 841 aa
MLTLSADMDESSSLLDLLECSVCLERLDTTARVLPCQHTFCRRCLENIVSSRNELRCPEC
RILVDCGVDDLPANILLVRLLDGIKQRPQRGSGGGVGGRQSLTGGSLQGYAAGISASPPG
SAIRELPVAIRSSPVKNIPALPCGKALYSYEGKEPGDLQFSKGDIIILRRKVDDNWYHGE
LNGCHGFLPASYIQLLRPLSQTPPQGKALYDFEVKDKDQDKDCLAFSKDEVLTVIRRVDD
NWAEGMLGDKIGIFPILYVELNETAKQLMEIDKPTPTNVPGPSSEPTPLGPCSPGPSPSA
SPSNGNGSGHRRGEGKKNAKKRHSFSALSVSQRAAQLNNRHSMEISHPVLISSSDPRAAA
RIQDASHPGASPSSAGVLVPPKVASITSELLAHAKVQLPLNIYLALYAYKPQKADELELR
KGEMYRVTEKCQDGWFKGTSLRTAASGVFPGNYVTPVSRAPFGVGGSRGSSLSSPVGGGG
GGGSGCSKISAPSSPGSPGSPGPSSSRPSTPLANSVNTASPASSPQTAAAQLKNCLRSNQ
HTVNQARTSMQLVHSPPAGSPERSTVALSPLRPQSSSPSRCPGQSGRPLSMVSPGPSLGP
SPLSSPALRPLLPLSSPLSCLTPPNVSAVLLNGDPASPLQTPSSGHSHSPTQGVLAPKAE
KKERKAGGLLKLLSGAAAKKKPRSPPSSPPTHDPSQSGQGAVATDPAHRPHPHHHHARSG
SCPMASQGRAGSCPIESEMAGAIGLEPLHRKSGSLDTNFPMSPPATRASNALMVLRPEPK
PLSRERYRVVVPYPPQSEAEIELREGDVVFVHKKREDGWYKGTLQRTGQTGLFPSSFVES
F
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgctcaccctttccgccgacatggacgagtcttcgtctctgctggatctactggagtgc
tcggtgtgcctggagcgcctggacaccacggccagggtgctgccgtgccagcataccttc
tgccgccgctgcctcgaaaacattgtcagctcccggaacgagctccgctgcccggagtgc
cgcatcctggtggactgcggggtggacgacttgccggctaacatccttctggttcgcctt
ctggacggtattaagcagcggccccagcgagggagcggaggaggagtaggcggcaggcag
tccctgactgggggctcgctgcagggctacgcagccgggatatccgcttctcccccgggc
agtgcgatcagagagctgcccgtagccatcaggagctcccctgtgaagaatatcccagcg
ctgccttgcggtaaagccctctactcctacgaaggaaaagaaccaggcgatctccaattt
tccaagggtgacatcatcatcctgcgacgcaaggtggatgacaactggtaccatggcgag
ctcaatggttgccatggtttcttgcccgctagttacatccagttgctgcgtcccctgagc
caaactcctccccagggcaaagcactgtacgactttgaggtcaaggataaagaccaggat
aaagactgtctggccttcagcaaggatgaggtactgacagtaatcaggcgagtggacgac
aactgggcagaaggcatgctgggagacaagattggtatcttccccattctctatgtggag
ttaaatgaaacagccaagcagttgatggagatcgacaagcctaccccaaccaacgttcca
ggtccaagctccgagccaaccccgttgggcccctgctctcctggtccctcccccagtgcc
tccccttccaatggaaatggctctggtcatagaagaggtgaagggaagaaaaacgccaag
aaaaggcattcattctctgcgctgtccgtcagccagagggccgcccagctcaacaacaga
cacagtatggagatctctcacccagtcctcatcagctcctctgaccccagagctgctgca
cgcatccaggatgcatctcacccgggcgcctctccttcctcggcaggggtgctggtacct
cccaaagtggcatccataacctctgagctgctggcccatgccaaggtgcagctgccacta
aacatatatctggctttatacgcctacaagccccagaaggctgatgaactggaactcagg
aaaggggagatgtatcgggtgacagagaagtgtcaagacgggtggttcaaaggcacctca
ctgagaactgctgcctctggtgtcttcccaggaaactatgtcactcccgtatccagggcc
ccgtttggagttggtggttctcggggctcgtctttgtccagtccagtaggtggaggagga
ggaggaggaagtgggtgtagtaaaatctccgccccttcgtctccagggtccccagggtcg
ccggggccctcttcgtcccgtccctccaccccactagcaaactctgttaacactgcaagt
cccgcatcctctccacaaactgccgctgcccagctgaagaactgcctgcgctccaatcag
catacagttaaccaggcacgcacctcaatgcagctggtccacagtcctcctgctggaagc
ccagagcgctccacagtggccctctcccctctgcgtcctcagagttcctccccctcacgc
tgcccaggacagtcgggtcgtcctctctccatggtgtctccagggcccagcttagggccc
tcacccctctcttcccctgccttgaggcccctccttcccctctcctcccctctctcctgc
ctcacgcctcccaacgtgtcagcggtgcttctcaacggggacccggccagtcccttgcag
acaccatcatcgggccactcccacagccccacccagggcgtcctcgcacccaaagcagag
aagaaggagaggaaagcaggaggtttattaaagctcttgtcaggtgcggcagccaaaaag
aaacctcgctcacctccctcctccccgcccacccacgacccttcacaatctggccaaggc
gccgtggccacggaccctgcccaccgtcctcacccccatcaccaccacgcccgctcaggt
tcctgtccgatggcatcgcagggacgagccggctcctgtccaatcgagagtgagatggcg
ggggccattggactggagcctctgcacaggaagtctggatccctggacaccaacttcccc
atgtcgccccccgcaacacgcgctagcaacgctctgatggtcctccggcctgaacccaaa
cccctgtccagagagaggtatcgtgtggtggtgccctacccgccccagagtgaggcagag
attgagctgcgggaaggcgacgtagtgtttgtgcacaagaagagggaggacggctggtac
aaaggcaccctgcagaggacgggacagaccggcctatttcccagcagctttgtcgagagc
ttctga

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