Etheostoma cragini (Arkansas darter): 117953582
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Entry
117953582 CDS
T07493
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117953582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117953582
03036 Chromosome and associated proteins [BR:
ecra03036
]
117953582
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117953582
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117953582
PBAF complex
117953582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
HMG_WDHD1
Pcf11_helical
CENPH
Motif
Other DBs
NCBI-GeneID:
117953582
NCBI-ProteinID:
XP_034742621
LinkDB
All DBs
Position
2:7350773..7362499
Genome browser
AA seq
427 aa
AA seq
DB search
MSKRPSYAPPPPPAPATQMPNTAGFVGYNPYSHLAYNNYRLGGSQSSNSRVTNSCGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGFSMKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFSNELKRLCCMKVEVDMEKISAEIAAAEEAARKRM
ADRDKDAGDRGAREAPTCVLAEEEKHICATHGNKSQQNSLSESSNKEGEDAESNTTDTPG
KPKASEELEAHPGSEEGVSEDKESVPEGAMEEGTSDSNTGSETTSAQTEDAPTSEPSEGS
SRARAAH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaccatcctatgcccctccccctccccctgcccctgcaactcaaatgccc
aacactgccgggtttgtggggtacaacccatacagccatctggcctacaacaactacaga
ctgggagggagccaaagcagcaacagtcgggtaacgaattcctgtggaattaatatcccc
aagccacccaagccacctgataagccattgatgccatatatgagatatagtcgtaaggtt
tgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgagtataatgagagcatgaaggcctatcacaactcaccagcctacctg
gcttacgtcaatgcaaaaagccgggccgaggcagctctggaagaggagagccgccaaagg
caatccagactggacaagggcgagccctacatgagcattcagccagcagaggatccagat
gattatgacgacgggttttctatgaagcactcagctgcagcccgtttccagcgtaaccat
cgtctgatcagcgagatcctcagtgagagcgtagtcccagacgtgcggtcagttgttacc
acagctcgcatgcaggtcctcaaacgccaggtccagtctttgatggtacaccagagaaag
ttagaggcagagttgcttcagattgaagaccgccaccaggataagaaaagaaaattcatt
gaagccacagagtcgttctctaatgagctcaaaaggctgtgctgtatgaaggtggaagtg
gacatggagaagatttctgcagagattgctgcagcggaagaggcagcccgcaaacggatg
gcagatcgtgacaaggatgcaggagacagaggtgcaagagaggcccccacctgtgtctta
gcagaagaagagaaacacatttgtgcaacacatggcaacaagtcccagcaaaattctcta
agcgaaagtagcaacaaagaaggcgaggatgccgaatccaacaccacagatacaccaggg
aagccaaaagcatcagaggagcttgaggctcatccaggcagtgaggagggagtgtcagag
gacaaggagagcgtcccagagggagccatggaggagggaaccagcgacagtaatacaggc
tcagagaccacctctgctcagacagaagatgccccgactagtgagccatcagaggggtcc
agcagagcgagagcagcccactaa
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