Etheostoma cragini (Arkansas darter): 117953613
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Entry
117953613 CDS
T07493
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117953613 (kcnn1a)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117953613 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DALR_1
DUF7310
Motif
Other DBs
NCBI-GeneID:
117953613
NCBI-ProteinID:
XP_034742683
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All DBs
Position
12:19126943..19178648
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AA seq
989 aa
AA seq
DB search
MRHRYAGAVHQHQTPDEKQAISKQSPDPVAPVFSLPPPPSSHHRDRTSSTAAHRQSLQEL
PCLSQPYRRPVHSGDPLPLASYDTARQPAHRGTEPSTRQQDPWAPAGSQQPPPQSENQPV
FPSCHCSFSEQEASLSQNHHYPPDPLPPQPSPPFPPPIPPPPTSSSSSLLFSQGSKRGDR
LRRSANNYQQASIVERCRGGGGAGGHRDQRQLLQQQQQQQQQQQQHSHLRLQQRDPSPEG
TRANSQKGRSLNVCESTEANRRAFESQTQDLQQQQIPQLRAQQQLLVGSSLPINYCASGS
GELCRTQQAPLLQQQGALGLCPQRPQHCEQERNKSGRITTQGDQAQPHSRESRVTPPATQ
QAYAGNSSATGSNSSKDSPNYGSSYHLWPESPHKGEERIRIDLHKATTEQKKLSHAGSKP
SLSESSGRLPQIAMNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQALHSSGLEVV
VSKGNGGEDPSKASNESLVREGSGHSGGRAPQKKNRDIGYRLGHRRALFEKRKRLSDYAL
IFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVD
NGADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILS
IPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSI
SSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTG
IMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKL
VKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSEL
QERSEELDKRIGTLEDKLDLVTGSLQALPCLISQAITQQQQDFLDGFVHRFRPASLASER
SERSDRSWTSTARRRRSPSTAPHTSSDSG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtccatcagcaccaaacccccgacgaaaagcaagcg
atcagcaagcagagcccagacccagtcgctcctgttttcagcctgccgcccccgccctct
tctcaccaccgagaccgcacttcgagcaccgcagcccaccgccagagcctccaggagctt
ccctgtctgagccagccctaccggagacctgttcacagcggcgaccctttacctctggcg
agctacgacaccgcccggcaacctgcacaccgaggcactgaacccagcaccaggcagcag
gatccctgggccccggccggctcccagcagccgccgccgcagtcggagaaccagcctgtt
tttccaagctgccactgcagtttttccgagcaggaggcgagcctttctcaaaaccatcac
tatcctcccgatcctctcccaccgcagccctccccaccttttccgccgcctataccgccg
ccaccaacgtcgtcttcctcctctctgctattttcccagggatctaagaggggggatcgg
ctgcgaaggagtgccaataattaccaacaggcaagcatcgtggaacgctgcaggggagga
ggaggagcaggagggcaccgagaccaaaggcagctgttgcagcagcagcagcagcagcag
cagcagcagcagcagcacagtcatttaagactccaacagagggacccctcccctgaagga
acccgtgcaaactcgcagaaagggcgctctttaaatgtatgtgagtcaaccgaggctaac
aggagagcatttgagtctcagactcaggacctgcagcagcaacagatcccacaattacgg
gcgcagcaacagctactggtggggagcagcttgccgatcaactactgcgccagcggctca
ggagagctatgtaggactcagcaggctccactgctgcaacagcaaggcgcactggggctc
tgtccccagcgtccgcagcactgtgaacaagagcgcaataagtctgggaggatcaccacg
caaggcgaccaggcgcagccacacagccgcgagtcccgcgtaacccccccggcaacacag
caggcgtacgcggggaactcgtctgcgactggcagcaacagcagcaaagacagccccaac
tacggctcgagctatcacctgtggcccgagagcccgcataaaggagaggagaggatacgc
atcgacctccataaggccactactgagcagaagaagctgagccatgctggatccaagccc
tccctgtctgagagcagtggccgactccctcagatagccatgaacacctgcaagtacaat
ggcggagtggtgagaccactagtgggcagcctggcgtcctcgtcgcgccgcaacctcgca
gagctcgactcggagacgcagcccttgcaggcgctgcacagctctggtctggaggtggtg
gtgtcgaagggcaacggcggcgaagaccccagcaaggcgtccaatgagagcttggtcagg
gagggcagcgggcacagcggaggaagggcgccgcagaagaagaacagggacattggctac
aggcttggccaccggcgggcgctgtttgagaagcggaagcggctcagcgactacgcactc
atcttcgggatgtttgggattgttgtcatggtgacagagacggaactgtcatggggggtt
tacactaaggaatcttcatactcatttgcactgaaatgccttatcagcctttccactgtt
atattgcttggtcttataataatgtaccatgccagggaaatccagctgtttatggtcgac
aatggtgcggacgattggaggatagccatgacgtatgagcggatcttctttatcgtgctg
gagctgctggtgtgtgctatccatcccatcccgggccagtacgtcttcacctggacggcg
cggctggccttcacctacacaccgtcggtggccgatgctgacgtggacattatcctctcc
atccccatgttcctgagactctacctgataggcagagtcatgttactccacagcaagctg
ttcacggacgcttcgtctcgcagcatcggcgccctcaacaagatcaacttcaacacacgc
tttgtcatgaagaccctcatgaccatctgtccaggaactgttctgctggtgttcagtata
tcctcctggatcattgctgcatggactgtgcgtgtctgtgagaggtatcatgacaaacag
gaagtgaccagtaacttcctgggagctatgtggctcatttcgattaccttcctctccatt
ggctacggggacatggtaccacacacatactgtgggaaaggtgtgtgtctgcttacaggg
attatgggagctggttgcactgcactggtggttgcagtggtagccaggaagctggagctg
accaaggctgagaaacatgtccacaatttcatgatggacacacaactctgcaaacgagta
aagaacacagctgccaatgtactcagggaaacatggctcatctacaaacacactaagttg
gtcaagaagatcgatcacgccaaggtgcggaaacaccagcgcaagtttctccaagccatt
caccaagctcagaaactgcgtagtgtaaagatggagcagaggaaactcaatgatcaggcc
aacaccttggtggacctggctaagactcagaatgtgatgtatgacctggtgtcagagctg
caggagcgcagcgaggagttggacaagcgcatcggcacattggaggacaagctggacttg
gtgacgggcagcctgcaggcgctgccctgcctcatctcccaagccataacccagcagcag
caggacttcctggacggctttgttcaccgctttcgacccgcctcactagcctcagagcgc
tctgaacgctctgatcgatcctggacttccaccgcccgtaggcggcgctctccctccaca
gcaccacacacctcctccgacagcggataa
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