Etheostoma cragini (Arkansas darter): 117953755
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Entry
117953755 CDS
T07493
Symbol
cpdp
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117953755 (cpdp)
Enzymes [BR:
ecra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
117953755 (cpdp)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117953755 (cpdp)
Prokaryotic type
117953755 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
CENP-U
Motif
Other DBs
NCBI-GeneID:
117953755
NCBI-ProteinID:
XP_034742926
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All DBs
Position
12:8744498..8753774
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AA seq
558 aa
AA seq
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MLHCVWRSSSFSSAPRRLLRLGDHSSPRPSSVFSCPSKSFTSQTIMSDKKRKATSSAASA
GKEPRAKQQKLAPVKEEKKERAEGWLQDLVKQQRTEKKEMIFNKKRLRFISDTKQAKQGS
EGVLYWMLRDHRVQDNWALIQAQRLALEENLPLHICVCLFVPKSELSTLRHYSFMLKGLK
EVAKECKTLDIQFHLLHGLAGDVLPGFVSDHGLGAVVTDFSPLREPLQWLEDVKKALPKD
IPLIQVDAHNIVPCWVASPKLEYAARTIRGKITKLLPEFLTEFPLVEKHPYTATGAAKQI
DWDKILVSLQVDRSVGEPEWAKPGTNGGMAMLESFIDVRLKLFDTQRNDPNAAALSQLSP
WIRFGHLSAQRVALQVQHRGKSSGVSVSSFIEELVVRRELTDNFCFYNKKYDCLEGAYEW
AQKTLKDHAKDKRPYLYTREQLEKAETHDKLWNGAQNQMVTEGKMHGFLRMYWAKKILEW
TSSPEEALSIALYLNDRYELDGQDPNGFVGCMWSICGIHDQGWGERAVFGKIRYMNYKGC
LRKFDVARFERKYCPKNL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgttgcactgtgtgtggagaagctcatctttctcctctgcaccaaggcgactcttgagg
cttggtgatcacagtagtcctagacccagttcagtattctcctgcccgagcaagtcattc
accagtcaaaccatcatgtcagacaaaaaacgcaaagcaacatcttcagctgcttctgct
ggtaaagagccccgtgctaagcagcagaagttggcccccgtgaaggaggaaaagaaggag
agagccgagggctggctgcaggaccttgtgaagcagcagaggacagagaagaaggaaatg
atattcaacaaaaagcgcctccgctttatttctgacactaagcaggcaaagcaaggctca
gagggtgtactgtactggatgttgagagaccatagagtacaagataattgggccctgatc
caggcccagcggcttgctttggaggagaaccttcctctgcacatctgtgtctgcctgttt
gtcccgaaatcagaactgtctactctgagacattacagctttatgctaaaaggtctgaaa
gaagttgcaaaggaatgcaagaccttagacatccagttccacttgctgcatggtttggcg
ggggacgttctccctggctttgtgtctgaccatggactgggggcagtggtgacagacttc
tcccccctcagagagccactgcagtggttggaggatgttaaaaaggcacttccaaaggac
atccccctcatacaggttgatgcccacaatattgttccgtgctgggtagcatcgcctaaa
cttgagtacgccgccaggacgatcagaggaaaaatcaccaagcttttgccggagttcctc
acagagtttcctctggtagagaaacacccgtacacagctactggagccgccaaacaaata
gactgggacaaaatcctggtctccctgcaggttgaccggtcagttggcgagccggagtgg
gcgaaaccaggcaccaatggagggatggccatgttggagtccttcattgatgtacgcctt
aaactgtttgacacccaacgcaatgacccaaatgctgctgccctcagccagttgtccccc
tggatccgctttggccacctgtcagcccagcgtgtggcactgcaggttcagcaccgtggc
aagtcttcaggtgtttctgtctcctccttcattgaggagctggtggtgcgcagggagctg
accgacaacttttgcttctacaacaagaaatacgactgcttggagggcgcgtatgagtgg
gctcagaagaccttgaaagatcatgccaaagacaagagaccgtatctctacacacgtgaa
cagctggagaaagcagagacgcatgacaagctctggaacggtgctcagaaccagatggtc
actgaggggaagatgcatggtttcttgaggatgtactgggccaaaaagattctggagtgg
acttcttcacctgaggaggcactctcaatcgctctgtacctaaatgatcgctatgagctg
gatggccaggaccccaatggctttgttggttgtatgtggtctatttgtggcatccatgat
cagggctggggagagagagctgttttcggaaagatccgctacatgaactacaaaggctgc
ctgcggaagtttgacgtagcccggtttgagagaaagtactgtcccaaaaacctttga
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