Etheostoma cragini (Arkansas darter): 117953858
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Entry
117953858 CDS
T07493
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117953858 (mib1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117953858 (mib1)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117953858 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117953858
NCBI-ProteinID:
XP_034743145
LinkDB
All DBs
Position
12:complement(13261027..13319779)
Genome browser
AA seq
1041 aa
AA seq
DB search
MTTGRNNRAMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKIAPSGSAVSNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPEVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHNVDLEAEDKDGDRAVHHAAFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNASLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSGQVGTRSPSLNSNIESLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPFVLCCGGKGMEDDAADDDDDDDDDDDDEDLTGSSNTMAGGSQDLLQPNNLALS
WSSGNIPAMQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQLC
GDRMSECPICRKAIERRILLY
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgactaccggcaggaataaccgagcgatgatggaaggagtaggagcgagagtggtccgt
ggacctgactggaagtggggaaagcaggatggtggagagggacatgttggcaccgtaagg
agttttgaaagtccagaggaggtggttgttgtctgggataatgggacggccgcgaactac
cgttgttctggagcgtacgacgtgaggatattagacagtgctccaacaggcatcaagcat
gatggaaccatgtgtgacacctgccgtcaacagcccatcattggtattcgctggaaatgt
gctgaatgcaccaactacgacctttgcacaacatgttaccatggagacaagcatcacctg
agacacagattctacaggatcaccaccccaggcagtgagagagtacttttggagtcacgt
cgcaagtcaaagaaaatcacagccagaggaatcttcactggtggccgggtggtgagagga
gtagattggcagtgggaagatcaagatggaggcaacggaaggagaggaaaggtgacagag
atccaggactggagtgcagccagccctcacagcgctgcctacgtactgtgggacaatggg
gccaagaacctgtacagagttggctttgagggaatgtcggatctgaaatgtgtccaggat
gccaaaggtggctctttttacagagaccactgtcccgttttaggtgagcagaatggcaac
agaaatcctggtggtctccagattggagaccttgtcaacatcgacttagacctggagatt
gttcagtccctccaacatggccacggcgggtggactgacggaatgtttgagacgctcacc
accaccggcacagtatgtggcatcgatgaagatcacgatattgtggttcagtaccccagt
gggaacagatggacattcaatccagccgtgctgacaaaggccaatgtagtgcgcagcggt
gaagtagcagccggggcagaggggggcagttcccagttcctagtgggagacctggtgcag
atttgctatgacatcgaccgcatcaagctgctacaaagaggccatggagagtgggccgag
gcaatgctacctacccttggcaaggtgggccgtgtgcagcagatctactctgacagtgac
ctgaaggtcgaggtatgtggaacatcttggacgtacaatcctgccgctgtcaccaagatt
gccccctctggctctgctgtcagcaacgcctccggagagcgtttgtctcagttgctgaaa
aaactatttgagacacaagagtctggagacataaatgaggagctggtcaaagcagctgcc
aatggtgacctggccaaggtggaggacatcctcaagagacctgaagtggatgtgaacggg
cagtgtgctggacacactgctatgcaagcagccagtcagaatggtcacgtagatgtccta
aagctgctacttaaacacaatgtggacctggaagctgaggacaaagatggggaccgggca
gtgcaccatgcagcctttggtgatgagggctctgtcattgaggtgctgcagaggggcggt
gctgacttgaatgccaggaacaagcgaagacaaactccattacacatagctgtcaacaag
ggccacctgcaggtggtcaaaacccttctggacttcggctgccaccccagccttcaggat
tcagagggggacacacccctgcatgatgccataagcaagaagagagatgacatgctgtca
gtattgcttgaggctggtgctgatgtcaccatcaccaacaataacggcttcaatgccctg
catcatgctgctctgcgaggaaaccccagtgccatgcgtgtgctgctatctaaactgccg
aggccttggatcgtagatgagaagaaggacgacggttacaccgcactgcacctagctgcc
ctcaacaaccatgtggaggtggctgagctcttagtgcaccagggcaatgccagcttagac
atccagaacgtcaaccagcagacggcactacacctggcagtggagcgtcaacacacccag
atagtccggctgctggtgcgtgcagaggccaagcttgatgtgcaggacaaggacggggac
acaccacttcacgaggcactgcgtcaccacacactgtcccaactgcgacaactccaagat
atgcaggatgtcagcaaagtggagccctgggagccctccaagaacacattaatcatgggc
ttgggcacccagggggcagagaagaagagtgcagcatccattgcctgcttcctggcagct
aatggagcggacttgaccattcgtaacaagaagggccagtcccctctagacctgtgtcca
gaccccagcctctgcaaagctctggccaaatgccacaaagagaagagcagtggccaggta
ggcacccgcagcccatctctgaacagcaacattgagtcactggaggagtgtatggtgtgt
tcagacatgaagagagacactctgtttgggccctgcggacacattgccacctgctccctc
tgctcgcctcgtgtcaagaagtgtctcatctgcaaggaccaggtgcagtcaagaaccaag
attgaggagtgcgtagtctgctctgacaaaaaagcagccgtgttgttccagccctgtggt
cacatgtgcgcttgtgagaactgtgccagcctcatgaagaagtgcgtacagtgtcgggct
gtggtggaacgccgtacccccttcgttctgtgctgtggagggaaaggtatggaggatgat
gccgctgatgatgatgatgatgatgatgatgatgatgatgatgaggaccttacagggagc
tctaacactatggcagggggatcgcaggatcttctccaacccaacaatctggcactaagt
tggtccagcggaaacatcccagccatgcagagagacaaagacaacaccaacgtcaacgct
gatgtacaaaagctacagcaacagctccaagacatcaaggaacagactatgtgtccggtg
tgtctggaccggctaaagaacatgatcttcatgtgcggccatggcacctgccagctgtgt
ggggaccgaatgagtgagtgccccatctgccgcaaggccattgagcgccgcatcctcctt
tactag
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