Etheostoma cragini (Arkansas darter): 117953882
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Entry
117953882 CDS
T07493
Symbol
slc6a9
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117953882 (slc6a9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117953882 (slc6a9)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117953882 (slc6a9)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117953882
NCBI-ProteinID:
XP_034743194
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Position
12:6076252..6145158
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AA seq
655 aa
AA seq
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MSETNTIAASTTDQNGAVPGEPVKKDENSRRGNWGNQIEFVLTSVGYAVGLGNVWRFPYL
CYRNGGGAFMLPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWKISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFMSMTNLLPWTYCNNPWNTPDCSGVLGSSPLLNASLVNTTTS
LVAAASEVVNRTKRTSPSEEYWKHYVLNISDDIGNFGEVRLPILGCLAVSWFVVFLCLIK
GVKSSGKVVYFTATFPYLVLTILFIRGITLDGAINGIKFYLTPQWQKVLDAKVWGDAASQ
IFYSLGCAWGGLITMASYNKFHNNCFRDSIIISVTNCATSVYAGFVIFSILGFMAHNLNV
PVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAVVDE
IGTDWIIRNKTVVTLSVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMCICV
MYVYGYRNYFKDVEMMLGFPPPLFFKVCWRFISPLIISFILIFTVIQYKPIKYNNYVYPG
WSLAIGFSMALSSVVCIPIYALYKISRSPGATFRERLKFACMADPNWGPALQEHRTGRYA
PMASEDTVEARPLKEKEELKEELKDDEKERKDEISLTIQGSNGSTNTHSNPNPSA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagactaacaccattgccgcttccaccacagaccagaatggagcagttccaggc
gagccagtgaagaaggatgaaaactcccggagagggaactggggcaaccagatagagttt
gtcctcaccagcgtgggctatgctgtgggcctgggcaatgtctggaggtttccctacctt
tgctacagaaatggaggaggtgccttcatgttaccatacttcatcatgctggtgttctgt
ggcattcctctcttcttcctcgagctgtcctttggtcagtttgccagccaggggtgtctg
ggagtatggaagatcagccccatgttcaaaggtgtgggctatggcatgatggtggtgtct
acctacattgggatctattacaacgtggtcatttgtattgccttctactatttcttcatg
tccatgacaaatttgcttccatggacctactgcaacaacccgtggaacacaccggactgc
agcggggtgctgggcagcagccccctgctcaacgccagcctggttaacactaccacaagc
ctggtagcagcggcatccgaggtagtcaaccgtaccaagaggaccagccccagtgaggag
tactggaaacactatgtgttgaacatctcggatgatattgggaattttggagaggtccgt
cttcctatcctgggctgcctggcggtgtcctggtttgtcgtatttctctgtctcatcaag
ggtgttaaatcctctggaaaggtggtgtactttacagccacattcccctatcttgttttg
accatcctgtttatccgtggcatcaccctggacggagccatcaatggcatcaagttctac
ctgactccacaatggcagaaggttcttgatgcaaaggtgtggggagatgctgcatcccag
atcttctactccctgggctgtgcatggggtggtctcattaccatggcttcctataacaag
ttccacaacaactgtttcagagacagtatcatcatcagcgtaacaaactgtgcgaccagc
gtctatgccggctttgtcattttctctatcttgggcttcatggcacacaacctgaacgtc
cctgtgtcagaggtggctgaccacggcccgggcctggcctttgtagcctacccagaagcc
ctcactctgctcccaatctcaccactctggtcacttctctttttcttcatgctcatcctc
ctgggactggggactcagttctgtctgctggagaccctggtgacggccgtcgtcgatgag
atcggtacggactggatcatcaggaacaagacggttgtcacattgtcagtggccatagtt
gggtttttacttggagtgccactaacgacacaggcaggaatctattggttgttactgatg
gacaactatgctgctagtttctctctggtcatcatctcttgcatcatgtgcatctgcgtt
atgtatgtttatggctacaggaactactttaaagatgttgagatgatgctgggcttccct
cctcctctcttcttcaaagtctgctggagattcatctcccccctcattatctctttcatc
ctgatcttcacagtgatccagtacaagcccatcaagtacaataactatgtgtatcccggc
tggtctctggctatcggcttctccatggctttgtcctcagtggtctgcataccgatctat
gccctctacaagatctcaaggtccccaggagccaccttcagagagcggttgaagttcgct
tgcatggcagatccaaattggggccccgccctgcaggagcaccggacaggccgctacgcc
cccatggcctccgaagacactgtggaggctcgtcccctcaaggagaaggaggagctgaag
gaggagctgaaagatgacgagaaggagaggaaggatgagatcagcctcaccatccaggga
agcaacggctccactaacacacacagcaaccccaaccccagcgcatag
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