Etheostoma cragini (Arkansas darter): 117953907
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Entry
117953907 CDS
T07493
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecra04054
]
117953907
Pattern recognition receptors [BR:
ecra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117953907
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
LRR_6
NOD2_WH
PRY
LRR_1
LRR_4
SPRY
AFG1_ATPase
PatG_D
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
117953907
NCBI-ProteinID:
XP_034743226
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All DBs
Position
12:397407..455070
Genome browser
AA seq
1231 aa
AA seq
DB search
MDRPIKMEERRKRRRQKDGEDQIESRRQRTHQRPDQPDPDSDPEPSCVSFESDQSNDEWI
NFKGDQPSAGKRIHQRPDSAGPEPSCVSFKSDWSYQGLIDFKGQQPTAGKSVDQESSEGP
SDQPAQQHQTQLDSIFMLLEEDIVTFVKNELKKIQKVLRPDYPECLESQREGKDEDQRRS
REAFLKITLHFLRRMKQDELADRLQSRSPAGVSQCKLKSKLDRKFQRVFEGIAKAGNQTV
LDQMFTEIYLMKGGAAGVNEEHEVRQIETASRKPDRPEPTIRQEDIFKTPPGRDKPIRTV
MTTGVAGIGKTVLTQKFTLDWAEGKANQDIQFTFPFTFRELNVLKERKFSLVELVDYFFS
ETKEAGICRFEEVPVVFIFDGLDECRLPLDFLNTKILTDVTKSTSVDVLLTNLIRGNLLP
SARLWITTRPAAANQIPPGCVDMVTEIRGFTDAQKEEYFRKRFRDEEQASRIISHIKTSR
SLHIMCHIPVFCWITATVLEDMLKTRQGGELPKTMTEMYIHFLVVQSKVKNIKYDGGAET
DPHWSTESRKMMESLGKLAFEQLQEGNLIFYESDLTECGIDIRAASVVSGVFTQIFKEER
GLHQDKVFCFVHLSVQEFMAALHVNLTFTNSGVNLLAEEQKTSLTQFYQSAVDKALQSSN
GHLDLFLRFLLGLSLQTNQNLLRGLLTQTGSRSKTNAETVKYIKKKMDEGLYAERSINLF
HCLNELNDRSLVEQIQWYLSSGRLSTDNLSPAQWSALVFILLSSEEDLDVFDLKKYSASE
KALLRLLPVVKASKRALLSGCNLSERSWEALSSVLSSQSSSLRELDLSNNNLQDSGGKLI
SDGLKSPHCTLETLSLSGCLISEEGCSSLVSALSSNPSHLRELDLSYNHPGDSGVKLLSA
GLKDPLWRLDTLRLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGGKLISDGL
KSPHCTLETLSLSGCLISEEGCSSLVSALSSNPSHLRELDLSYNHPGDSGVKLLSVGLKD
PLWRLDTLRVEPAGVRWLTPGLRKYSCELTVDTNTVHRNLKLSDNNRKVTCVKEDQSYPG
HPERFESWSQLLCRDGLTGRCYWEVQTRGKVDISVSYRRIRRRGDSDDSGFGFNNQSWSL
SCSDDRYYVWHNDRRTSISSSCVSGRVAVYVDCPAGSLSFYTVSSDSLIHLHTFNTSSTQ
TLYPGFGFWSRGSSVSLCPVEDGESPPVSHC
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggacaggccaattaaaatggaggagagaaggaagaggcgaagacagaaggacggggag
gaccagattgaaagccgaagacagaggacccatcagagaccagaccaacctgatcctgat
tctgatcctgaacccagctgtgtgtcctttgagagcgaccagtcaaatgatgaatggatt
aactttaaaggagatcaaccctctgctggaaagagaatccatcagagaccggactctgct
ggacctgaacccagctgtgtgtccttcaagagtgactggtcatatcaaggcctcattgac
tttaaagggcaacaacccactgctggaaagagtgtggaccaggagagctcagagggtccc
agtgatcagcctgcccagcagcatcaaacacaactggactccatctttatgctgctggag
gaggacattgtcacttttgtgaagaacgagctgaagaagatccagaaggttctgagacca
gattacccagaatgcttagagagtcagagggagggtaaggatgaagatcagaggaggagc
agagaggcgtttctgaagatcacactgcacttcctgaggagaatgaagcaggacgagctg
gcagaccgtctgcagagcagaagtccagcaggagtttctcagtgtaaactcaaatctaag
ctagacaggaagttccagcgtgtgtttgaggggattgctaaagcaggaaaccaaaccgtt
ctggatcagatgttcacagagatctacctcatgaagggaggggctgcaggggtcaatgaa
gaacatgaggtccgacagattgaaacagcatccaggaaacctgacagaccagaaccaaca
atcagacaagaagacatctttaaaaccccacctggaagagataaaccaatcagaacagtg
atgacaacgggagtggctggcatcgggaaaacagtcttaacacagaagttcactctggac
tgggctgaaggcaaagccaaccaggacatccagttcacattcccattcaccttcagagag
ctgaatgtgctgaaagagagaaagttcagcttggtggaacttgttgattacttctttagt
gaaaccaaagaagcaggaatctgcaggtttgaagaggtcccggtggtcttcatctttgac
ggtctggatgagtgtcgacttcctctggacttcctcaacactaaaatcctgactgatgtt
acaaagtccacctcggtggatgtgctgctgacaaacctcatcagggggaatctgcttccc
tctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgggtgt
gttgacatggtgacagagatcagagggttcactgacgcccagaaggaggagtacttcagg
aagagattcagagatgaggagcaggccagcagaatcatctcccacatcaagacatcacga
agcctccacatcatgtgtcacatcccagtcttctgctggatcactgctacagttctggaa
gacatgttgaagaccagacagggaggagagctgcccaagaccatgactgagatgtacatc
cacttcctggtggttcagtccaaagtgaagaacatcaagtatgatggaggagctgagaca
gatccacactggagtacagagagcaggaagatgatggagtctctcggaaaactggctttt
gagcagctgcaggaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatc
gatatcagagcagcctcagtggtctcaggagtgtttacacagatatttaaagaggagaga
ggactgcaccaggacaaggtgttctgcttcgtccatctgagtgtccaggagtttatggct
gctcttcatgtcaatctgaccttcaccaactctggagtcaacctgctggcagaagaacaa
aaaacatcattaacacagttctaccagagtgctgtggacaaggccttacagagttcaaat
ggacacctggacttgttcctccgcttcctcctgggtctttctctgcagaccaaccagaat
ctcctacgaggtctgctgacacagacaggaagtagatcaaagacgaatgcggaaacagta
aagtacatcaagaagaagatggatgagggtctgtatgcagagagaagcatcaacctgttc
cactgtctgaatgaactgaatgatcgttctctagtggagcagatccaatggtacctaagt
tcaggacgtctctccacagataacctgtctcctgctcagtggtcagctctggtcttcatc
ttactgtcatctgaagaagatctggacgtgtttgacctgaagaaatactctgcttcagag
aaggctcttctgaggctgctgccagtggtcaaagcctccaaaagagctctgctgagtggc
tgtaacctgtcagagagaagctgggaagctctgtcctcagttctcagctcccagtcctct
agtctgagagagctggacctgagtaacaacaacctgcaggattcaggagggaagctgatc
tctgatggactgaagagtccacactgcacactggagactctcagtctgtcaggatgtctg
atctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctg
agagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtcagcg
ggactgaaggatcctctctggagactggacactctcaggctgagtggctgtaacctgtca
gagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagag
ctggacctgagtaacaacaacctgcaggattcaggagggaagctgatctctgatggactg
aagagtccacactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaa
ggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggac
ctgagctacaatcatccaggagactcaggagtgaagctgctgtcagtgggactgaaggat
cctctctggagactggacacactcagggtggagcctgctggagtcagatggttgacacca
ggtctgaggaagtattcctgtgaactcacagtcgacaccaacacggtgcacaggaacctc
aaactgtctgacaacaacaggaaggtgacatgtgtgaaggaggatcagtcatatcctggt
catccagagaggtttgagtcctggtctcagctgctgtgtagagatggcctgactggtcgc
tgttactgggaggtccagaccagaggaaaggttgatatatcagtgagttacagaagaatc
aggaggagaggagacagtgatgactctgggtttggatttaacaatcagtcctggagtctg
agctgctctgatgatcgttactatgtctggcacaatgacagaagaacctccatctcctcc
tcctgcgtctctggtagagtagcagtgtatgtggactgtcctgctggctctctgtccttc
tacacagtctcctctgactcactgatccacctccacaccttcaacacctcatccacccag
actctctatcctgggtttgggttctggtctcggggctcctcagtgtctctgtgtcctgtg
gaggacggagagtctcctcctgtctctcactgctga
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