Etheostoma cragini (Arkansas darter): 117953941
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Entry
117953941 CDS
T07493
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117953941 (lamc1)
04518 Integrin signaling
117953941 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117953941 (lamc1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
RVT_1
SlyX
BLOC1S4
Motif
Other DBs
NCBI-GeneID:
117953941
NCBI-ProteinID:
XP_034743250
LinkDB
All DBs
Position
12:complement(514715..527632)
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AA seq
1093 aa
AA seq
DB search
MLEYFMLEYFMLDYLVLEYFMLEYIMLEYFMLEYFMLEYFMLEYFILEYFLLEYFMLEYF
ILEYFMLEYFMLEYFMLEYFILEYFVLQYFILEYFILEYLIQEYFILEYFILEYFVLKCF
YRGSHFISLHNHISATASVTQGVPQGSVLGPLLFIIYLHPLGQILRHFNLNFHCYADDTQ
IYLSTNSPHNPPLSHINSCLSAIKTWMHHNFLKLNSNKTEFLLIGSKSTLCKANNPTLII
DGTIVSPSPQARNLGVIFDSTLSLEPHIRQVIKTSFFHLRNIAKIRPSLTPSAAERLIHA
FVSSRLDYCNSLLLGISSTSIKRLQLVQNSAARLITCSTSWHHITPFRKTRVRVEHQSFS
LCVCVCVCVCLCVTEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGADLRVAVPL
IAQGNAYPNENMQTYVFRLHDSTDYPWRPTISHADFQKLLHNLTAIKIRGTYSERSAGYL
DNVSLVTARRGPGAPARWVEQCTCPQGYQGQHCEQCTLGYRRARPELGAFSACEPCNCNG
HSDACNPDTGACDCRDNTAGLSCERCKDGFYGDATQGSSGDCQPCPCPAGATCAVVPKTR
EVVCTNCPTGTTGKRCELCDDGFFVDPLGPVRACRACKCSDNIDPNAVGNCNRETGECLK
CIYNTDGFFCDRCMDGFYGNALAANVADKCKPCSCSPLGTVGRQTGCSQVTGQCPCLPNV
AERDCSACQPGFFNLQSAAGCERCNCNPIGSTNGQCDIGSGQCECQPGVTGRHCQRCEPN
FFGFSSSGCKRERTDITGDITGDITDVDVYFLFPVGQTADQLLARVDAAKALAEEAAKKG
QSTFREAEDILEDLRDFDRRVNDNKTAAEDALKKIPAINATIAAANQKTRQAEAALGNAA
ADAQEAKEKAEEAERIASNVQKGSAKTKEDAEKAFQDTSALDSEVGDMMDQLDAAEEQLA
RKKAEADRDMMMAGMASDNAKEAEDNARKAKSAVKTVLGTITVLLEQLGNIDKVDLSKLN
QIDESLKRARGQMGDSKLDMKLTELNDVARSQEDMINHYDRQIREIRADIANLNDIKNTL
PDGCFNTPSLEQP
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctggagtactttatgctggagtactttatgctggattacctcgtactggagtacttt
atgctggagtacattatgctggagtactttatgctggagtactttatgctggagtacttt
atgctggagtactttatactggagtactttttgctggagtactttatgctggagtacttt
atactggagtactttatgctggagtactttatgctggagtactttatgctggagtacttt
atactggagtactttgtactgcagtactttatactggagtactttatactggagtacctc
atacaggagtactttatactggagtactttatattggagtactttgtactgaagtgtttc
tacagaggatctcatttcatctcccttcataaccacatctctgctactgcctcagttacc
caaggtgttccccaaggctctgtactcggcccccttcttttcatcatctacctccacccc
cttggtcagattctccgccatttcaacctgaacttccactgttatgctgatgacacccag
atctacctcagcaccaactccccccacaatccccccctctcccacatcaactcctgtctg
tcagcaatcaaaacctggatgcaccacaacttcctcaaactaaacagcaacaaaacagaa
ttcctcctcataggctccaaatccactctctgcaaagccaacaaccccactctcatcatt
gacggcaccattgtctccccatctccccaggcccgcaaccttggtgtgatttttgattca
accctctcccttgagcctcacatccgtcaagtcatcaaaacctccttctttcaccttcga
aatattgctaaaatcagaccctcactcactccctctgctgccgaaagacttattcacgcc
ttcgtctcctcacgactcgactactgcaactcactactcctcggcatcagctcaacctcc
atcaaaaggctccaactggttcagaactcagctgcacgactcatcacctgctccacatcc
tggcaccacatcactccgtttaggaaaaccagagtgagagtagaacatcagtcattctct
ttgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgcgtgacagagaagttcctggggaac
cagatgctgagctacgggcagaacctgagtctgagtttccgggtggaccggcgggacact
cggctgtcggcggaggacctggttctggagggcgccgacctaagggtggcggtccccctc
atcgcccagggcaacgcctaccccaacgagaacatgcagacatatgtgttcaggctccac
gacagcaccgattacccctggagaccgaccatcagccacgcagacttccagaaacttctc
cacaacctgaccgccatcaagatccgcggcacctacagcgagaggagtgccggttacctc
gacaacgtctccttggtgacagcgaggcgaggtcccggtgctccggcgcgctgggtggag
caatgcacctgtcctcagggttaccaggggcaacactgcgagcagtgcacgctgggttac
cgccgcgcccgtcccgagctcggcgccttcagcgcctgcgaaccgtgcaactgcaacggc
cacagcgacgcctgcaacccagacacaggtgcgtgcgactgtcgggacaacacggccggt
ctgagctgcgagcgctgtaaagacggtttctacggcgacgccacccaggggtcgtcaggt
gactgtcagccctgtccctgtccggccggagcaacctgcgccgtggtccccaaaaccaga
gaggtggtctgcaccaactgtcccacaggaaccacaggtaagcgctgcgagctgtgtgat
gacgggttcttcgtggaccccctgggtccggtccgagcctgccgcgcctgcaagtgcagc
gacaacatcgaccccaacgccgtcggcaactgtaaccgggagacgggcgagtgcctcaag
tgcatctacaacacggacggcttcttctgcgaccgctgcatggacggtttctacggcaac
gccctggccgccaacgtcgccgacaaatgcaaaccgtgctcgtgctcgcccctcggcacc
gtggggcgccagaccggctgctcccaggtcaccggccagtgtccctgtctccccaacgtg
gcggagcgggactgcagcgcctgccagcccggcttcttcaacctgcagagcgccgccggc
tgcgaacggtgcaactgcaatccgattggctccaccaacggccagtgtgacatcgggtcg
ggtcagtgtgagtgccagcccggcgtcaccggccgccactgccagcgctgcgagcccaac
ttcttcggcttcagctcgtcgggatgcaaacgtgagcgcactgacatcactggtgacatc
actggtgacatcactgatgttgacgtgtacttcctgtttcctgtcggacagacggccgat
cagctgttggctcgagtggacgccgccaaggctctggctgaggaggcggccaagaagggc
cagtccacgttcagggaggccgaggacatcctggaggacctcagagacttcgacaggcga
gtcaacgacaacaagacggcggcggaggacgccctgaagaagatccccgccatcaacgcc
accatcgccgccgccaaccagaagacccggcaggccgaggcggcgctcggcaacgccgcc
gccgacgcccaggaggccaaggagaaggcggaggaggcggagaggatcgccagcaacgtg
cagaagggctcggccaagaccaaggaggacgcggagaaagccttccaggacaccagcgcc
ctggacagcgaggtgggggacatgatggaccagctggacgccgccgaggagcagctggcc
cgcaagaaggccgaggccgaccgcgacatgatgatggcgggaatggcgtcggacaacgcg
aaggaggccgaggacaacgcccgcaaggccaagagcgccgtgaagacggtgctgggcacc
atcaccgtcctgctggagcagctgggaaacatcgacaaggtggacctgagcaagctgaac
cagatcgacgagtccctgaagagggctcggggccagatgggggacagcaagctggacatg
aagctgacggagctgaacgacgtggcgcgctcccaggaggacatgatcaaccactacgac
cggcagatccgcgagatccgcgccgacatcgccaacctcaacgacatcaagaacacgcta
cccgacggctgcttcaacacgccgtccctggagcagccctaa
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