Etheostoma cragini (Arkansas darter): 117954079
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Entry
117954079 CDS
T07493
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecra03032
]
117954079 (pif1)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117954079 (pif1)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117954079 (pif1)
DNA replication proteins [BR:
ecra03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117954079 (pif1)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
117954079 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
Mg_chelatase
AAA_7
RsgA_GTPase
AAA_16
ABC_tran
AAA_24
PhoH
Motif
Other DBs
NCBI-GeneID:
117954079
NCBI-ProteinID:
XP_034743457
LinkDB
All DBs
Position
12:complement(21435430..21448885)
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AA seq
634 aa
AA seq
DB search
MLAGEDGGQLQCCVAVEQLNTSGQATRRQLIRKASVVLGRNEFHEIILRVHDGKVPQNYH
LNEFKLFTKFAREGKCTVKLLRENIQVLISNCPPDRLNLFLKTLSIKHQARLSSKPLSGR
EKLKAGLPRSFEAISPLQQKDIQKVNELRGTGAPAGLAERTNRMTGAGTGQQVKRSRSDT
NFSPVKANPSKKPILSLPTRKLNKEQAAVLGAVLSGKNIFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEISMVEAQFFDKLEAVARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKERASFCFQARS
WRKVIQVNMELMEVRRQTDQSFISLLQSVRVGRVTEEVTEKLMGSAYHHIERDGILASRL
CTHKDDVELTNDKKLQQLPGSVRVFEALDSDPALVKTIDAHSPVSKLIQLKVGAQVMLTK
NQDVSRGLVNGARGVVVAFECGKNGLPHVRFLSGVTEVLKPERWVFKSGGGVHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLQGLRVMDFDPRVVRADP
DVLVFYKRLRKERLLMQASMEDFLGNSNKENSCR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgttagccggggaggacggcggccagctgcagtgctgcgtggccgtggagcagctcaac
acctccggccaggccacccggaggcagctgatccgtaaggcctcggtcgtcctgggccgg
aacgagttccacgagattatcctccgcgtccacgacgggaaagtgccacaaaattaccat
ttgaacgaattcaaacttttcaccaagttcgccagagaagggaaatgcaccgtcaagctg
ctccgtgaaaacatccaggtgctcatctccaactgcccccctgaccggctcaaccttttc
ctcaaaaccctgagcatcaaacatcaggcccggctgagcagcaagcctctgagcggccga
gagaagctcaaagccggtctgccccgcagcttcgaggccatcagccccctgcagcaaaaa
gacatccagaaggtgaatgagctgaggggtacaggggcccccgcagggctggcagagcgg
accaataggatgactggagcaggaacaggacagcaggtcaaaaggtccaggagtgacacg
aacttcagcccagtaaaggccaacccgagcaagaagcccatcctgtctctgccaacacgt
aagctgaataaagaacaggcggctgtccttggcgctgtgttgagtggcaagaacatcttc
ttcactggaagtgcaggtacaggaaagtccttccttctaaagagaatcatgggatctctt
cctccaaagagcacatttgccacagccagcacaggagtggccgcgtgccacattggagga
acaacattacacaactttgctggcatcggctccggctcggcgccgctggagcagtgcatc
gagctggctcagcggcccggcgtgctgcagcactggaccagctgtcggcacctcatcatc
gacgagatctccatggtggaggcccagttctttgacaagctcgaggcggtggcaaggtcg
gtgcggaggtctacggagccgtttggaggcatccagctgatcgtgtgtggcgacttcctc
cagcttccccccgtttctaagggaaaggagcgggccagcttctgcttccaggccaggagt
tggcgtaaggtcatccaggtgaacatggagctaatggaggtgcggaggcaaacagaccag
tccttcatctccctcctgcagtcggtgcgggtgggcagggtgacggaggaggtcactgag
aagctgatggggagcgcctaccatcacatcgagagggatggcatcctagcgagcaggctg
tgcacacacaaggacgacgtggagctcacaaacgacaagaaactccagcagctgcccggg
tcagtgcgtgtgttcgaggctctggacagcgacccggccctggtgaagaccatcgacgct
cacagccccgtcagcaaactgatccaactcaaagtgggggctcaggtcatgctgacgaag
aaccaggatgtctctcgaggtctggtgaacggagcgcgcggggttgtcgtggcttttgag
tgtggcaaaaatggactcccacatgtgcgtttcctgtctggtgtcaccgaggtgctgaag
cctgagcgctgggtgtttaagtccggcgggggggtccacctgagtcgacagcagctgccc
ctcaaactggcctgggccatctccatccacaaaagccagggaatgacccttgactgcgtg
gagatctctctggcgcgtgtgtttgagagtggccaggcctacgtggcgttgtctcgggct
cggagcctgcagggtctgagggtcatggactttgacccccgcgtggtcagggcagatcca
gatgttcttgtattctacaagagactgaggaaagagaggctgctcatgcaggcctccatg
gaggactttctcggcaacagcaacaaagagaactcttgcaggtga
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