Etheostoma cragini (Arkansas darter): 117954136
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Entry
117954136 CDS
T07493
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117954136
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
117954136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
EGF_2
PAV1-137_bromodom-like
Motif
Other DBs
NCBI-GeneID:
117954136
NCBI-ProteinID:
XP_034743563
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All DBs
Position
12:22827446..22975056
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AA seq
1308 aa
AA seq
DB search
MDPGTNRLAGIIAQVALLLFSSYGTTGEEVCDSALVSNLSPSSFRSSSQLSSSHAPGFAK
LNRRDGAGGWSPHTSDPYQWLEVDLGQRTTITAVATQGRYGSSDWLSSYLLMVSDTGHNW
KQYRQEDSIGSFPGNSNADSVVQYKLQQPAIARFLRFIPLEWNPSGRIGLRLETYGCPYT
SDVVGLDGGSSGLVYRLSPGQRRVSREAVSLKFKTLSNSGTLLHADGEGGLGLTLELERG
KLLLLLRQGRTSSSEPRLVASLGSLLDDQHWHHVAVERRSSHLNLTVDKHTERVQMPSEF
SHWDIQQLSVGAVQSSQKPVSKRNFHGCLENLLVNDHNLIDLAKQKDPHVTVVGNVTFSC
AESLSVAATFPGPHSFLQLPAPGSSPGGVSIGFQFRTWNKAGLLLTFELPQEGGVVWLCL
SDARLRLQIHKAGRTLLELTAGSAMNDGQWHAVELNSRRGHVTIAVDAKGGGFAHASHSV
AAGKYFFFGGCPAEEDSQDCKNPFNIFQGCMRLLTVDNQPVDLMKVLQRLLGNYSHLQID
MCGIIDRCSPSRCEHGGRCSQSWTGFHCNCSESGYSGATCHSSVYQQSCEAYKHNGNTSG
HFYIDVDGSGPIKPQPVYCNMTEENTWMVIQHNNTELTRVRPSPGVNQLSVQFDYSTEEE
QLLTAISQSEHCEQELSYHCRKSRLLNTPEGSPFSWWLGGPGSGRVQTYWGGAYPGSKQC
VCGLQGNCVDPQHYCNCDADRMDWAEDSGLLTHEESLPVRSLVLGDIQRPESEAAYRVGP
LRCHGDKNFWNAAFFNKETSYLHFPTFHGELSADISFLFKTTATSGVFLENLGIKDFIRI
ELSSSTQVLFSFDVGNGPLEVRVDSSVPLNDNRWHRVRAERNVKEASLRLDELPVATQEA
PVDGHIHLQLNSQLFIGGTASRQKGFRGCIRSLQLNGVTLDLEERAKITPGVRAGCPGHC
SSYGSLCQNQGRCVERANGFHCDCSLSAYTGVFCHTEVSASFKSETSVSYTFKENPYELR
RNGSSPPSSIYSDVTPRGENVSLSFRTNQSPALLLYVGSYHREYLALLVNKHDVLEVRYK
LDGSRDAEVLRSTVKNLANGQLHTVTIRRLADSVSVQIDQNAREDFNLTSDGEFSAIKKL
VLGRVHEADDLDPDMSRLASLGFTGCLSVVHFNSISPLKAALLHPDTSPVIITGPLVQSN
CGSSASANPYAAENTHHLSDQSGSAGSGQPLVNAIRTDSALIGGVIAAVVFVIATGLAIT
ARFLYRRKQTYRNQEVKDVKREDSPDFPFNNQTESQNVPTENPKDYFI
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgggactaacagactggctgggattatcgctcaggtcgccctgcttctcttc
agctcgtacgggacaaccggagaagaggtgtgtgacagcgcgctggtgtccaacctgtcg
ccatcgtccttccggagctcgtcccagctgtccagcagtcacgcgccgggcttcgccaaa
ctcaacaggagagacggcgctggaggctggtcccctcacacctcagacccgtaccagtgg
ctggaggtggacctgggccagcggaccaccatcaccgctgtcgctacgcagggccgctac
ggcagctctgattggctgtcgtcgtacctgctgatggtcagcgacactggacacaactgg
aagcagtacagacaggaggacagcatcgggtcttttccagggaacagtaatgcagacagc
gtggttcagtacaaactgcagcagccggcgatcgctcgcttcctccgcttcattcctctg
gagtggaaccccagcgggaggatcggactccggctggagacctacggatgtccttatacc
tctgacgtggtgggtctggacggcggcagtagcggtctggtgtacaggttgagtcctggg
cagaggcgcgtgtccagggaggccgtctctctgaagtttaaaaccctaagtaattctggg
acactgctgcatgcagacggtgagggaggactcggcctcaccctggagttagagagaggg
aagctactgctgcttctcagacaaggtaggacttcatcctctgaaccccggcttgtggct
tccctcggcagcctgttagatgatcagcattggcatcatgtagcggtggagcggcgcagc
tctcacctcaacctcactgtggacaaacacacagagagggttcagatgccgtcagagttc
agccactgggacatccagcagctgagtgtcggggcagtccagagctctcagaaaccagtt
tccaagaggaacttccatggctgccttgaaaacctgcttgtcaacgaccacaacctgata
gacttagctaaacaaaaagacccccatgttactgtagtgggcaatgtgaccttttcctgt
gctgagtcgctttctgtcgccgcgacgttccccggcccacacagcttcctccagttgccg
gcgccggggtcctcgcccgggggcgtgtccattgggttccagttcaggacgtggaacaag
gcggggcttctgctcacgtttgagctgcctcaggaagggggcgtggtctggctgtgcctg
agtgatgccagactgcggctacagatccataaggctggcaggacgctgctggagctcact
gcaggttcagcaatgaatgacggtcagtggcatgcggtggagctgaactctaggcgaggt
catgtgaccatcgctgtggatgcaaaaggaggaggttttgctcacgccagccactccgtc
gccgcgggaaaatacttcttcttcggtggttgtcctgctgaagaggacagtcaggactgt
aaaaaccccttcaacatcttccaggggtgcatgcgtctcctaactgtggacaaccaacca
gtggacctgatgaaggtgctgcaaagactgctgggaaattacagccacctccagattgac
atgtgtggcatcattgacaggtgttctcccagtcgttgtgaacacggcggccgctgcagt
cagtcctggaccggcttccactgtaactgctctgagagcggctacagcggagccacctgc
cacagctctgtttaccaacagtcgtgcgaggcgtacaagcacaacggtaacacgtcggga
catttttatatcgacgttgacggcagcggaccaatcaaaccgcagccggtctactgcaac
atgacagaggagaacacatggatggtgatccagcacaacaacacagagctgactagagtc
cggccgtctccaggtgtaaaccagctttcagtccaatttgattactcgactgaagaggag
cagcttttgaccgccatcagccaatcagaacactgcgaacaggaactgtcctaccactgc
aggaagtcccgcctcctcaacactccagagggctctccgttcagctggtggctcggtggt
cccggttccggtcgtgtgcagacttattggggcggagcttatccaggcagcaagcagtgt
gtctgcggcctgcagggcaactgtgtggacccacaacactactgcaactgtgacgccgac
cgcatggactgggctgaagactcgggtctgctcacccatgaggagagcctccctgtcagg
tctctggtgctgggtgacatccagaggcccgagtcagaggccgcctacagggtgggaccg
ctccgttgtcatggagacaagaacttctggaacgctgcgttcttcaacaaggagacatcg
tacctccacttcccaaccttccacggggagctgagcgcagatatctccttcctgtttaaa
accacggccacatccggcgtgttcctggaaaacctgggcatcaaagacttcatccggatc
gaactgagctcctctactcaggtgcttttctctttcgacgttggtaacgggccgctggag
gtccgcgtggactcaagtgtccctctaaatgacaaccggtggcatcgcgtccgagccgag
cggaacgtcaaggaggcgtcccttcgattggacgaacttcctgtcgccacacaggaggct
cctgttgacgggcacatccacctgcagctaaacagccagctgttcataggaggaacagcg
tccaggcagaagggatttcggggatgtattcgctccctgcagctgaacggcgtcaccctg
gacctggaggagagggccaagatcacacccggggttcgagccggctgcccgggtcactgc
agcagctacggctcgctctgccagaaccagggccgctgtgtggagagagccaacggcttc
cactgtgactgcagcctgtcagcatacaccggggtcttctgccatacagaggtgtcggcc
agcttcaagtcggagacgtccgtcagctacaccttcaaggagaacccgtacgagttgaga
aggaacggcagctctccgccgtcctccatctactccgacgtgacgccgagaggagagaac
gtctcgctgagcttcaggaccaatcagagtccggctctgctgctctacgtcggctcctac
cacagagagtacctggccctgctcgtcaacaagcacgatgtgctggaggtgagatacaag
ctggacggcagccgagacgctgaagtgttgaggagcacagtgaagaacctggccaatgga
caattacacactgtgacaatcaggagactggcagactcggtgtctgtgcagatcgaccaa
aacgccagagaagactttaacctgacatctgacggagaattcagcgccatcaagaaatta
gtgttgggcagagtgcacgaggctgatgatttggatccagacatgtccaggttggcgtct
ctcggtttcaccggttgtctctcagtggtccactttaactccatcagccctctgaaagct
gctctgctccacccagacaccagccctgtcatcatcacgggaccattagtccagtccaac
tgtggctcctcagcatcagccaatccctacgcagcagaaaacacacaccacctgtcagac
cagtctggttcagcgggttcaggtcaacctttagtcaatgccatcaggactgactcggct
ctgattggaggtgtcatagcagcggtggtctttgtgattgcgaccggcctggccataacc
gccagattcctctaccggagaaaacagacgtatcgaaaccaggaagtgaaggacgtcaaa
cgggaagacagcccagatttccctttcaacaaccagactgagtcccagaacgtccccacc
gaaaacccgaaggattatttcatttaa
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