Etheostoma cragini (Arkansas darter): 117954141
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Entry
117954141 CDS
T07493
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117954141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117954141
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117954141
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117954141
NCBI-ProteinID:
XP_034743591
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Position
12:22640851..22655138
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AA seq
589 aa
AA seq
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MKSLDGRMDGHRRKRENQISATERGQWASKTEYILVVAGNVVGLGNVWRFPYLCYKNGGG
AFLVPYCLLAVVCGIPLFLLETSFGQYSQEGFITSWRKVCPLAQGIGFGQLTITLCGFIY
ILIEAWALFYLVFSFRSKLPWVSCDNTWNTANCRGLQTLPSSNVTANLTNTTSAATEFWE
RRVLGMSGGIEELGSVRWELALCLLACWVICYFSIWKGVRSSGKVVYFTATFPYVMLLTL
LIRGLTLPGAWEGIYYYLYPDLNRLANLEVWIEAGSQIFFSYSLSSGTLHILGSYNEYNN
NCYMDCFWLCLLNSGTSFVAGFVVFSVLGFMAQKQGVTVDTVVESGPSLAFLAYPQATAM
MPFPQFWTVCFFLMLILLTVDTHFVIVESFITTVTDLFPKWFRVPIRHKMFVLAICVSSF
LIHLTLVTEGGIYIFQLIDFYGCTRVSQNFVAVCECLAVGWVFGADRLSNIIEDMTGQRP
SVFFKLCWKYFIPLLTLTSFILYLVDYKALKFNNWYVYPDWAYALGWTMTLSSVLMVPLC
AAGQMCFTAGTFRERLSVLCRPAEDPAWKRRAIGEEETTVELRTSAVTS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccttggatggcaggatggacggacacagaagaaaaagagaaaatcagataagt
gctacagaaagaggacagtgggccagcaaaacagaatatattctggttgttgcaggaaat
gtggtcggcctgggcaacgtgtggagatttccgtacctttgctacaagaacggtggaggg
gcctttctggtgccatactgtctgttagctgtggtgtgtgggatacctctgttcctgttg
gagacttcatttggtcaatacagccaggaaggattcatcacttcttggaggaaagtgtgt
ccactggctcaaggaattggatttggacaactgacgataacactctgtggcttcatctac
attttaattgaagcttgggctctcttctacctggtgttctcattcagatccaagctgccc
tgggtcagctgtgacaacacctggaacacggctaactgccgtggtctacagactttacct
tcatctaatgtgactgcaaacctgaccaacaccacctctgctgcaactgagttctgggag
cggcgtgtgctgggcatgtcgggtggcattgaggagctgggcagtgtgagatgggagctt
gctttgtgtcttctggcctgctgggtgatctgctacttcagcatatggaaaggtgtcaga
tcttctggaaaggtagtgtattttacagccacattcccctatgtgatgctcctgacactg
ctgatcagaggcttgactctacctggagcttgggaagggatctattactacctgtatcca
gacctgaaccgcctggctaacttggaggtctggatagaagcaggatctcaaatatttttc
tcctacagcctgagttcagggactctgcatatcctgggcagctataatgagtacaacaac
aactgttacatggactgcttttggctctgtctgctgaacagtgggaccagttttgttgct
ggatttgttgtcttctctgtacttggattcatggctcagaaacagggtgttactgttgac
actgtggtcgagtcaggtccaagtttggccttccttgcttaccctcaggcaacagctatg
atgccttttccacagttctggactgtctgcttcttcctgatgctcattctgctgactgtt
gacacacattttgtgatagtggagagctttatcaccacggtgaccgatttgtttccaaag
tggtttcgtgtaccaatcaggcacaagatgtttgtcctcgccatctgtgtatccagcttc
ctcatacatcttaccttggttactgagggaggaatttacatattccaactcattgacttc
tatggctgtaccagagtcagccagaatttcgtggctgtttgtgaatgcctggcagtgggc
tgggtatttggtgctgaccgcttatccaacatcatagaggacatgacaggacagagacca
tcagttttctttaaactctgctggaaatacttcattcctctgctgacactgaccagcttt
atcctgtacctggtggattacaaagccctcaagtttaacaactggtacgtttaccctgac
tgggcgtacgctctaggatggaccatgaccctctcttctgttctcatggtgccactgtgt
gcagctggacagatgtgtttcacagcaggaaccttcagagagcgtttgtctgtactttgt
cgtcctgctgaagatccagcctggaagagaagagccataggagaggaggaaaccacggtt
gaactgaggacgtctgcagtgacttcttag
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