Etheostoma cragini (Arkansas darter): 117954167
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Entry
117954167 CDS
T07493
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117954167 (gigyf2)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117954167 (gigyf2)
Surveillance factors
Other surveillance factors
117954167 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
117954167
NCBI-ProteinID:
XP_034743612
LinkDB
All DBs
Position
12:16281084..16297435
Genome browser
AA seq
1373 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGSGGGGGGGGGCGVASPPLSPALPKYKLADYRYGREEMLA
LYIKDNKIPIDLHDKDFLPILQEEPLPPLALVSFTEEEQRNFSMSVNSAAVLRLTGRGGG
PIVGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGFGRGGREMHRSQSWEERGERRFDKPV
RKDPAEVAPGHFPMNHIRGNYEDGVTGPPRKHDFTRSESENWRTSQNGEDEEGGWRPAGS
RWDSDWCCPTSPDGPRSAGWHPDQRRRFPFDAREDERGYRRQRSGSSSLEDERDSLPEWC
LEDAEEEAGTFDSSGAFLSLKKASKEPILEEAELDFKPLEECEEGLEEDDCQPRETKEME
TEAKREAKRKELTRASEKALPVNPPLAPPVSEPQVPAQSLSLSQPNKTEESERPSERHPP
LELQPAPCKVPLHVPISNSMLESLPMNHISTTLAELSAPSPSIQLPQKSMEVPVVMNNPL
PFPSSIIAPIGRPTAVPHDTDEDEGLKHFEQEAEKMVAYLQDSGVDDDRLTAKASEKPKP
AGLPLTHEAALKWFYKDPQGEIQGPFNNQEMAEWFQAGYFTMSLLVKRGCDEVFQALGEI
MKIWGRVPFTPGPAPPPLQGDGDQERLKRQQELTALNLYQLQQLQYQYLLRQQYAQALAQ
QKAAALSSAPLQQQQQHQQQINLLLQQYQTLKLRASESLLPPVTRSLSVPDSGSVWEMQN
PSSKASCTPNAQQAPSNTWDGSSVWDLPIDSIAQAPTIEQMQQLEKSKSAKLELERREAE
MRAKREEEERKRLEEALRARQVEERKRLEEEELARQKQEEALRRQLEQEEAHRRQKEEEE
RMKQEEALRRLEERRREEEERKKREEFLRKQEEERRKQEELEILRRREEEKRAEEEATAA
VAAAALAQQQLEEQKRREQEAQRQQELQRQRQQQQEALRRLQQQQQQQQLAHMKLPSSSK
WGQQSTNAVNQTQSTLSLAEIQKLEEERERQTQEEQRRRQHELLKLQQQQALQLAQQPQT
KLSGWGSVAKQPAATKSLLEIQREEAQQMKQRKEQQQQQQQQQQQQQQQQQQQQQQLQQQ
QQQQLQQQQQQQQQQQQQQQQQPPHPIAPQQIRTQNRTTSSLSNSVWGSVNTSTCTNWGS
DASSIWGDTHNSNMGFWDEAVKEAVQQPPQTKKSSTQKNNKGNANISNSVSGRANKKVEE
EEKLLKLFQGVSKSQQDTFMQWCEQTLHTLNTANNLDVPTFASFLKEVDSPYEVHDYVRA
YLGDTPEAKDFAKQFLERRAKQNANQQKQAPQKQQPLKQQQQQQDSVWGGTGSSSLYQSN
HTSGQQQCFETVTSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLEDF
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacccagacacttaactttggacctgaatggctccgtgccttgtctggaggt
ggcagtggtggtggtggtggtggaggcggtggctgcggggttgcctctccacccctctca
cctgcattgccaaagtataaacttgcagactatcgctacgggagagaagaaatgttagca
ctttatataaaggataacaagatccctatagacctacatgataaggactttctgccgata
ttgcaagaggagcctttgccgcctctggcacttgtgtcttttacagaggaggaacagaga
aatttttccatgtctgtaaacagtgcagctgtacttcggctgactgggcgaggaggtggt
ccaatagtaggggcaccaagaggcagaagtacctcaaggggtagaggccggggaagagga
gatggagggttttaccaaagaagttttgatgatgtggaaggttttggtcgtggagggagg
gagatgcatcgctcccaaagctgggaagaaaggggagaaagaaggtttgacaaaccagtt
cgaaaagacccagctgaagttgctccaggacattttccaatgaatcacatccgaggaaac
tatgaggatggtgtaacaggcccaccgaggaagcacgactttacgcggtcagagagtgag
aactggcgtacttctcagaatggtgaggatgaggaggggggctggcgcccggcggggtct
cggtgggacagtgactggtgctgccccacgagcccagatgggcctcgatcagcagggtgg
catccagatcaacgtcgccgttttccatttgatgcaagagaagacgagcgtggctacagg
aggcagcggtcaggcagcagcagcctggaggacgagagggacagcttgccagagtggtgt
ctggaggacgcagaggaggaggcgggcacttttgactcgtcgggggcttttctttcactc
aagaaagcctccaaggagccaatcctggaggaggcagagctcgacttcaaacccttggaa
gagtgtgaagagggcctggaggaggatgactgtcagcccagggagaccaaagaaatggaa
accgaagccaagagagaggccaaacgaaaagagttgacgagagcatcagagaaggcttta
cctgtgaatccacctcttgctcccccagtctcagagccccaggttcctgcccagtctctg
tccctgagccagcccaacaaaaccgaagagtctgagaggccatctgaacggcatccaccc
ctggagctccaaccagcgccctgtaaagtccccctgcacgtccccatatctaacagtatg
cttgaatccctacccatgaaccacatttctacaacccttgcagaattatctgctccatcg
cccagcatccagctaccacaaaagtccatggaggttcctgtggtgatgaataatcctttg
cccttcccttcaagtataattgcacctattggcaggcccaccgccgtgccacacgacaca
gatgaagatgagggactgaaacactttgagcaggaggcagaaaaaatggttgcatactta
caggatagtggggtggatgatgacaggctcacagcaaaagcttcagagaagcccaaacct
gcaggcctgccgctcacccacgaggctgctctcaagtggttctacaaagacccccaagga
gagatacagggtccattcaataaccaggagatggctgagtggttccaggctggttacttc
acaatgtctctcctagtcaaaagagggtgtgatgaagtatttcaagcgcttggagaaatc
atgaagatatggggaagagtaccgtttactcctggccctgctccaccacctctacagggg
gatggtgatcaagagaggttgaagaggcaacaagagctcactgctctcaacctttaccag
ttacagcagctccaatatcaatacctcctcaggcagcagtatgctcaggccctggcccag
cagaaagctgcagcgcttagctcagctcctcttcaacagcagcaacaacaccaacagcag
atcaacctgcttctacagcaataccagactctcaagctaagagcgtctgagagcctccta
cctcctgttacccgttccctgtctgtaccagactctggttctgtgtgggaaatgcaaaac
ccgtcctctaaggcttcgtgtacaccaaatgcccaacaagctccttcaaacacatgggat
ggcagcagtgtgtgggatttacctatagactccatagcacaggctccaaccattgagcag
atgcaacagttagagaagtcaaagtctgcaaagttggagttggagaggcgagaggcagaa
atgagagccaaaagggaggaagaggagaggaaacggctggaggaggccctgagggctcga
caggtggaggaacgcaaacgcttggaagaagaggagctggcacggcaaaaacaggaggag
gctttaagacgacaactagagcaagaagaggcacatcgcagacaaaaagaggaagaggag
agaatgaaacaagaggaagctctgcgtagattagaggagcggcggagggaagaggaggag
agaaagaaacgggaagagttccttcggaaacaggaagaggagcgcagaaagcaagaggaa
cttgaaatattaaggcggcgtgaggaggagaaacgagcagaagaagaagcaacagctgct
gtggcggcagcggctctggctcaacaacaactggaggagcagaagaggagagagcaagag
gcccaaagacagcaggagctgcagagacagaggcagcaacaacaagaggccctcaggaga
cttcaacaacagcagcagcagcagcagcttgcacacatgaagcttccatcatcttcaaag
tggggccagcagtctaccaacgctgtgaaccagactcagagcaccctgtcactggctgag
atccagaaactggaagaggagagagaacgacagacgcaggaagagcagagacgtcggcaa
catgagctcctgaagctacagcagcagcaggccttgcaactggctcagcagccccagacc
aagctgtctggttggggtagtgtggcaaaacagcccgctgcaactaaatctttgctggag
attcaaagggaggaagcccagcagatgaaacagcggaaggagcaacagcagcagcagcaa
cagcaacagcagcagcagcagcagcaacagcagcaacagcagcagcaactacagcagcaa
cagcagcagcaactacagcagcagcagcaacaacaacaacaacagcagcagcaacagcag
cagcagccgccacaccccattgccccccaacagatccgtactcaaaatagaactacatcg
tctctgagtaactctgtgtgggggtctgtgaacactagcacctgcactaattggggctca
gacgccagcagtatctggggtgacacccacaactctaacatgggcttctgggatgaagct
gtgaaagaggctgtccagcaacctcctcaaaccaagaaaagcagcacgcagaagaacaac
aaaggcaacgccaacatcagtaactctgtcagtgggcgagccaataaaaaagtagaagag
gaggagaagctgctaaagttgtttcaaggggtcagtaagagccagcaagacaccttcatg
caatggtgtgagcaaaccctgcacactctcaacacagccaacaatctggatgttccaaca
tttgcatccttcctgaaagaagtggactctccatatgaggtgcatgactatgtcagggct
tatctgggggacactcccgaggccaaggactttgccaagcagttcctggaacgtcgtgcc
aaacagaacgctaaccaacagaaacaggcaccgcagaaacagcaacccctcaagcagcag
cagcagcagcaggattctgtatggggtggaacaggatcttcatcactctatcagtccaac
catacaagtggccagcagcagtgctttgagacagtcacctcagggaaaaagaaaaagaag
cagaagatggtccgcgcagacccaagccttctaggtttttctgtgaatgcatcatctgag
agattgaatatgggagagattgagactttggaggacttttaa
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