Etheostoma cragini (Arkansas darter): 117954222
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Entry
117954222 CDS
T07493
Symbol
cacna1eb
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117954222 (cacna1eb)
04020 Calcium signaling pathway
117954222 (cacna1eb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117954222 (cacna1eb)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117954222 (cacna1eb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF2755
Motif
Other DBs
NCBI-GeneID:
117954222
NCBI-ProteinID:
XP_034743720
LinkDB
All DBs
Position
12:14457052..14514723
Genome browser
AA seq
2388 aa
AA seq
DB search
MLTNSDQSLSRSLTPNLHSPSRCGPGGNMHVQSSLSLPEPEAWRKPSSTPRHGLAQGARS
SSLQVPHTLPEYLGLPPRAASFDVPCGQEEGWSDQGSGSLSPHCMQRRRGGLVEQKDIIM
AHQAHKIQSTPQARRKEWEMARFGDESAPSTMDSGDGDVERGGEEGQDEAAAVLSASMKQ
AKAQRARTMAMYNPVPHRQNCLTVNRSLFIFAENNFIRKTARRIIEWPPFEYMILATITA
NCVVLALEQHLPGEDKTPMAKRLEKTEPYFIGIFCFEAGIKLVALGFVFHKGSYLRNGWN
VMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMIPL
LQIGLLLFFAILMFAIIGLEFYSGKLHQTCLPSVDILDNETVDSTELAFACGVRKCPEKY
DCNDTWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGTTWNWMYFIPLII
IGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLA
EENKSSGRSPLDVLKRASKKTGARRGAPGDEKYTDMSTASMSRSRMNFRSGRRGPAAYLR
RKERMLRISIRRMVKTDTFYLMVLSLVALNTICVAIVHHNQPDWLTIFLYYAEFVFLGLF
LAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRLLRI
FKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFVVVFALLGMQLFGGRFIFEDYTPTNF
DTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLA
IAVDNLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHRGRPNFPDE
PEDKTGAPDEQPLNGANAFVSRRERRRKVHMSVWEQRANQLRKRRQMASREELFASPTED
TVETPTIPHLAEPSPTHLPESPMSVGMPIPEPPMSITVPIPEPPTVEPLVNLSEEKTVGA
NHRTTGGGRHRMARKFRPSQGPDEGARHRRHRHRDARAEAKSLDCTQAPHEVPQVRRSHS
QERKILDEKEDKDDREEREKLEEEGESVQDDGGTCIINPYAEVAEDCRRDIPNPPQCEQL
LDCTWSEQGEGGHSDQSIPVETALEATEFSVRAIESENRPVSIKRDKSNLMGSVAIEMSA
QPLLELTAMTVNSKELEAYHSEQTDKEDDTEKEEDEEEEDEEEPPVPPKPIAPDSMFIFK
ASNPIRKICHYMVTMRYFEMTILLVIVASSIALAAEDPVCTNSDRNKVLRYFDYVFTGVF
TFEMIIKMIDQGLILHDGSYFRDMWNILDFIVVVGALIAFALTNVMGNNKGRDIKTIKSL
RVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFKGKFFY
CTDSSMNSEKACQGYYIDYSRDKKEVKRREWKRHEFHYDNVCWALLTLFTVSTGEGWPQV
LQHSTDVTEDSMGPSRGNRMEMSVFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMIQEC
TLEKNERACIDFTISAKPMTRYMPQNRQTFQYRLWHFVASPSFENTVLVMIALNTVVLMM
KYHSAPAAYDMVLKHLNSAFTVLFSMECILKIMAFGLVNYFRDTWNIFDFITVLGSISEI
IVDLQSVNTINMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFI
YAIIGMQVFGNIKLNDESHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCLSGQECEP
DSSIPPLIMSPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFVRIWGEYDRLACGRIHYTAMYEMLTHMSPPLGLGKKCPAKIAYKRLVLMNMPV
DEDMSVHFTSTLMSLIRTALDIKIARGGEDRITLDSELQKEISIIWPYLPQKTLDLLVPI
NKDTDMTVGKIYASMMIMDYFKLNKAKKLRQQLEAQKSSLIFKRLDGSALPEEILSNTQT
LPMMGHSAGSALTRGGFVALSPISPQELFLQPISADPDASQEQNLVGECSRGIEAPQELP
LGSGLCVRASSMPRLAVESQQTEVASGSMKRSASTIADQQVNGLWQEEKSPERLYRPRHK
SYKAAVSRSEHRQQGDRERGRSKERSHLLSPDTSRCNSEERSFQPSRSSSVERAHRQDKQ
GNSSDSPVPSTSESSTPSGRRPISQTRSRPHVSYSPLHPSVGEDEDEQGSPETIRRGKTN
WETQEQVAGDRLREAGRDASPLRRYPSEPFLASQEGDHSPDPSGPMETLTFEAAVACSLG
RSNTVSSARPRLRTGWQVPNGHFRKRLAQTTSVAGCDALSDTEEDDRC
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaattcagaccagtccctctcccgttccctcacacccaacctccactctcca
tcgcgctgtggtccaggtggaaatatgcacgtccagtcctccctatccctccccgagcct
gaggcctggaggaagcccagctccacgccccgtcacggcctggcacaaggagcccgatcc
agctccctgcaggtccctcataccctccctgagtacctcgggctgccccctcgagccgcc
agctttgatgtgccatgtggtcaagaagagggctggtctgatcagggttcagggtctctg
agcccccactgcatgcagcggcggcgtggtggacttgtggagcaaaaggacatcatcatg
gctcaccaggctcacaaaatccaaagcacgccgcaagcccgcaggaaggagtgggaaatg
gcacggtttggagacgagtccgctcccagcacgatggactccggggatggggacgtggag
cgcggcggagaagaaggacaggacgaggcggcagcggtgctctcggcttccatgaaacaa
gccaaggcgcagcgggcccggaccatggccatgtacaaccctgtcccacaccggcagaac
tgcctgaccgtcaacaggtcgctcttcatattcgcagagaacaacttcattaggaaaacc
gcacggcgaatcattgaatggccaccatttgagtacatgatcctggccaccatcaccgcc
aactgcgttgtcctggccttggagcagcacctccctggagaggataagacccccatggca
aagagactggagaagacagagccctacttcattgggatcttctgcttcgaggcggggatc
aagctggtggccctcggttttgttttccataaaggctcctacctaaggaacggctggaac
gtcatggacttcatagtcgtcctcagtgggatcctggccactgctggtgcccacatgaac
attccagtggaccttcggaccctgagggcagtgcgagtgctgagacctcttaaacttgtc
tccgggatccccagcctgcagattgtgctgaagtccatcatgaaggccatgatcccgctg
ctacagattggccttctcttgttttttgccatcctcatgtttgccatcattggtctggag
ttctacagcgggaagcttcaccagacctgcttgccatctgtcgatatcctcgacaatgag
actgtcgactcgacagagttggcgtttgcctgcggagtgaggaagtgtccagagaagtac
gactgcaacgacacctggattggacctaacgacggcatcacgcagttcgacaacatcctg
tttgctgtactcacagtcttccagtgtatcaccatggagggatggacagctgttctctat
aataccaatgacgccttgggtaccacatggaactggatgtacttcattcccctcatcatc
attggctcgttctttgtgctgaaccttgtgttgggtgtcctgtcgggagaatttgccaag
gaaagggagagggtggagaacaggcgggccttcatgaagctacgccgccagcaacaagtg
gaaagagaactgaacggctaccgagcctggatagacagggcagaggaggtaatgcttgca
gaagagaataaaagttctgggagatccccattagacgtgctaaagagggcgagtaagaag
actggtgcacggagaggagcgccaggggacgagaagtacacagacatgtctactgccagc
atgtcgcgatcgaggatgaacttccgcagcggccggcgaggccctgctgcctacctgcga
cgtaaagagcgcatgttacgcatctccatccgccgcatggtgaagacggacactttctac
ctgatggtgctcagtctggtggctctcaacaccatctgtgtggccatcgtccaccacaac
cagcccgactggctgaccatctttctctactatgctgagtttgttttcctggggctgttt
ttggctgagatgtttttgaaaatgtacggtctgggtttccggctctacttccattcatct
ttcaactgctttgactgtggggttattgttggcagcatctttgaggtcgtttggggcttc
ttcaggcctggcatgtcctttgggatcagcgtactgagggcactgagacttctgagaatt
ttcaagatcaccaaatactgggcctctctcaggaacctggttgtgtccctcatgagctcc
atgaagtccattatcagcctgctttttcttctctttctgtttgttgtggtatttgctctg
ctggggatgcagctttttggaggaaggttcatctttgaagattacactcccaccaacttt
gacacgtttccagctgccatcatgacagtgtttcagattctgactggtgaggactggaac
gaggtgatgtataatgggattcgctcgcagggtggagtgcagtatggaatgtggtcatca
atctacttcatagtgctcaccctgtttggaaactatacactgctgaacgtctttttggcc
atcgctgtggataatctggccaacgcacaggaactgacaaaggatgaagaggaggaggag
gagttcttcaaccagagatatgccagaggcagagatggcctgatatctgatgggaggaga
aggccctatctatacaggaaacgagccatccacagaggccgaccaaacttccccgatgag
cccgaggacaagacaggggccccagacgaacagcccctcaatggcgctaacgccttcgtc
agccgccgggagaggaggagaaaagttcacatgtcagtgtgggagcagagagccaaccag
ctacgcaaacggcgccagatggcaagcagagaggagctgtttgcaagccctacagaggac
accgttgaaactcccaccataccccaccttgccgagcccagcccgactcacctgcctgag
tctcccatgtctgtggggatgcccatcccagagcccccgatgtccatcaccgtccctatc
cctgagcctccaacagttgagcctctggtaaacctgagtgaggagaaaactgtcggagct
aaccaccggaccacaggcggaggcaggcacaggatggcccgcaagttcagacccagtcag
gggccagacgaaggggcgagacacagacgtcaccgtcaccgcgatgctcgtgctgaagcc
aagagtctggactgcacccaggcaccacatgaggtgccacaagtcagacggtcgcacagc
caggagaggaagatactggatgagaaggaagataaggatgacagagaggagagagaaaaa
ttagaggaagaaggagagtcagtccaagatgatggtgggacatgcatcatcaacccatat
gcagaagttgcagaagactgtcgaagggacattcccaatcctcctcagtgtgagcagctg
ctggactgtacctggtcagagcagggtgaaggcgggcactcagaccaaagcatcccagtg
gagaccgccttagaggccacagagttcagtgtgagggccatcgagtctgagaaccgcccg
gtctccatcaaacgggacaagtccaacctaatgggaagcgtggccatcgaaatgtctgca
caaccgctgcttgagctcacggctatgacagtgaacagtaaagagttggaggcataccac
tctgaacagacagacaaagaggacgacacagagaaggaggaggacgaggaggaggaggac
gaggaggaacccccggttcctccaaaacctatagctccagatagcatgttcatctttaag
gcctccaaccctatcaggaagatctgtcactatatggtcactatgcgctactttgagatg
accattctccttgttattgtggcaagcagcattgcactggctgctgaggaccccgtctgt
accaattcagacagaaacaaggtcctgcgttatttcgattatgtcttcactggagtgttc
accttcgaaatgatcatcaagatgatagaccagggtcttattctgcacgatggctcttat
ttccgagacatgtggaacatcctggactttattgtggtggtgggagctctgattgccttt
gctctaacgaatgtgatgggaaacaataaaggcagagacatcaagacaataaagtccctc
agagttttaagagttctgcggcctcttaaaaccatcaagaggcttcctaaactgaaggct
gtttttgactgtgtggtcacatctctgaagaatgtcttcaacatcctcatcgtgtaccag
ctcttcatgttcatctttgctgttattgccgtgcagctcttcaaggggaagttcttctac
tgcactgacagctccatgaattcagagaaggcatgccaaggctactacattgactacagc
agagacaaaaaggaggtgaagaggagagagtggaagagacatgagtttcactatgacaac
gtctgctgggccctgctcacacttttcactgtctcaactggagagggatggcctcaggtc
ctgcaacactctaccgatgttacagaggacagcatggggccaagtcgtgggaaccgaatg
gagatgtctgtgttctatgtggtctactttgtggtcttcccgttcttctttgtcaacatc
tttgtggctctgatcatcatcaccttccaggagcagggtgacaagatgattcaggagtgc
actctggaaaagaacgagagggcttgcattgactttactatcagtgccaagccgatgacc
cgctacatgccccagaacagacagaccttccagtacagactgtggcactttgtggcatcg
ccttcttttgagaacacagtgctagtcatgatcgctctcaacactgtggtcctcatgatg
aagtaccactccgccccggcagcctacgacatggtccttaaacacctcaactcagccttc
actgttctcttctccatggagtgtatactcaagatcatggcatttggcttggtgaactac
tttcgagatacttggaatatttttgatttcatcactgttcttggcagcatcagcgagata
attgtggatttacagtcggtgaacaccatcaacatgagtttcttgaagcttttccgagca
gccaggttgatcaagctgctgagacagggttacaccatccgtattctgctgtggaccttt
gtacaatctttcaaggctcttccttatgtttgtcttctcattgctatgcttttcttcata
tacgccataattggaatgcaggtgtttggaaacatcaagctgaatgatgagagtcacatc
aaccaacacaacaattttaagaccttttttagtgcattgatgctgctcttcaggagtgcg
acaggggagtcctggcaggagattatgctttcatgtctatctggtcaggagtgtgaacca
gactcctccatcccccctctcatcatgtctccagaccacgaaggaggctgtgggactgac
tttgcctactgctacttcgtctcattcatattctttagctcgtttctgatgctaaatttg
tttgtggctgtaatcatggataactttgagtacctgacacgagactcctcaattctgggt
ccccatcacctggatgagtttgttcgcatctggggggagtatgatcgtctggcatgtggt
cgtatccattacaccgccatgtatgagatgttaacccacatgtcaccgcccctgggcctg
ggcaaaaaatgccctgctaagatcgcctacaagaggttggtgttgatgaacatgcctgta
gatgaggacatgtccgttcacttcacctccacgctgatgtcactcatccgcacagctttg
gacatcaaaatagctagaggaggtgaggatcgtatcactctggatagtgaactacaaaaa
gagatcagtatcatttggccttatctgcctcagaagacgttggacctactggtacctatc
aacaaagatacggacatgacagtgggaaagatctatgcttcgatgatgataatggactac
ttcaaactgaacaaagccaagaagctcaggcaacaacttgaagctcagaagagtagctta
atttttaagcgtctggatggctctgctcttcccgaggaaattctgtccaacacccagacg
ctgcctatgatgggccacagcgctgggtcagccctgaccagaggaggatttgtggctttg
agccccatctcacctcaggaactgtttttgcagcccataagcgccgaccctgatgctagt
caagagcaaaatctggtgggcgagtgcagtagagggattgaggccccacaggagcttcca
ctaggaagtggtctgtgtgtgcgggcctcttccatgccccgtctggctgtagagtcgcag
cagacggaggttgcaagtggctccatgaaacgttcagcctccaccattgcagatcagcag
gtgaatggtctttggcaggaggagaaaagtcccgagagactctatcgacctcgtcacaaa
agctacaaggctgctgtttctcggtcagagcacagacagcagggcgacagggagcgtggc
cggtctaaggagcgctctcacctcctttctccagacacgtctcgttgtaactcagaggag
agaagttttcagccctcacggtcctctagtgtagagagagcacaccgccaagataaacag
ggcaacagctcggacagtccggtgccctccacatcagagtccagcaccccgagcggccga
cgacccatatcacagacccgctctcgccctcacgtctcctactctccgcttcacccctcc
gtcggtgaagacgaggatgagcaaggcagcccagagaccatacggcggggcaaaaccaac
tgggagacccaagagcaggtcgcaggtgacaggctgagagaggcaggcagagacgcgtcc
ccacttcggcgttacccctccgagccattcctagcctcccaagaaggggaccacagccca
gacccctctggccccatggagacgttgaccttcgaggcggctgtggcctgcagcctggga
cgctcaaacaccgtcagctcggcccgcccacgcttgcggactggctggcaggtccccaac
ggacactttcggaagcgcctggcacagacaacctctgttgctggctgtgatgctctcagc
gacacagaggaggatgacaggtgctag
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integrated database retrieval system
