Etheostoma cragini (Arkansas darter): 117954237
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Entry
117954237 CDS
T07493
Symbol
parla
Name
(RefSeq) presenilins-associated rhomboid-like protein, mitochondrial isoform X1
KO
K09650
rhomboid-like protein [EC:
3.4.21.105
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117954237 (parla)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117954237 (parla)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117954237 (parla)
Peptidases and inhibitors [BR:
ecra01002
]
Serine peptidases
Family S54: Rhomboid family
117954237 (parla)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
117954237 (parla)
Mitophagy factors
Parkin-dependent mechanism factors
117954237 (parla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Caps_synth_CapC
Motif
Other DBs
NCBI-GeneID:
117954237
NCBI-ProteinID:
XP_034743755
LinkDB
All DBs
Position
12:complement(17240422..17245784)
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AA seq
389 aa
AA seq
DB search
MAWRGCVLKWTKTEFLRSNNTTSQSSRLYPHNQQRCSFRREAKKPDVKKGNVTQESKASP
SEAGTPGSPPPPKVPRPTLLKPLMFTVGFTGCSFGAAAILQYETLKSRVTTPKAEEESEK
LLQGSQDMVYWHDWWNKLSGFQQQLLLLMSMVDDFWSSLTEGQKTVTGIIAVNAVVMCCW
RIPSMQRTMIKYFTSNPASKTRCLPMALSCFSHYSIIHMVANMYVLWTFSSGIVSLLGKE
QFLALYLSAGVISTMVSYMCKTATGRLHPSLGASGAVMAVLAAVCAKVPEAKLGIIFLPM
ITFTAGNALKVLVAMDTAGLILGWRLFDHAAHLGGALFGVWYVAYGHKLIWRKREPLVKL
WHDMRSPGAGGSRPGGGPGVSGGGGPGPQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggagaggatgtgtattgaaatggactaaaacagagttcctcaggtccaacaac
actacttcacaaagctccagactgtacccccacaaccaacaaaggtgcagtttccgtcgg
gaagccaaaaagccggatgtaaagaaaggaaatgtcacccaagaatcaaaagcttcacct
tctgaggctggcacaccaggttccccccctcctcccaaagtcccccgaccaacactttta
aaacccctgatgttcacagtcggatttacaggctgctcctttggtgcggctgccattcta
caatatgagaccctgaagtcaagagttacgactccaaaagctgaagaggagtcagaaaaa
ctcttacaggggtctcaggacatggtgtactggcatgactggtggaacaaactgtcaggc
ttccagcagcagctccttctccttatgtccatggtagatgacttctggagcagtctcaca
gagggacagaagactgtaaccggcatcattgcagtaaatgctgtagttatgtgttgctgg
cgcatcccttcaatgcaaagaaccatgattaagtacttcacgtccaacccagcctccaaa
acacgatgtcttcccatggccctgtcctgcttcagccactactccattatccacatggtg
gccaacatgtatgtcctgtggacattctcatcaggaattgtctctctcttagggaaggag
cagtttcttgcactctacctgtctgctggtgtgatttctactatggtcagctacatgtgt
aaaactgccactggacgtctccatccatcattaggcgcatctggagctgtcatggcagta
ctggctgcagtctgtgcaaaggtgccagaggccaaactaggaataatcttcctccccatg
atcactttcacagcaggaaatgctctgaaagtactcgtcgccatggatacagcagggctc
atactgggatggcggctctttgaccacgcagctcaccttggaggagccctctttggagta
tggtatgtggcgtatggtcacaaactgatttggaggaaaagggagcctcttgtgaagctg
tggcatgacatgcgttctcctggtgctggtggatccaggccaggaggtgggcctggggtc
agtggtggtggtggacctggtccacaatga
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