Etheostoma cragini (Arkansas darter): 117954255
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Entry
117954255 CDS
T07493
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117954255
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117954255
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117954255
NCBI-ProteinID:
XP_034743776
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All DBs
Position
12:23682907..23715849
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AA seq
1167 aa
AA seq
DB search
MLNVMDRNEVSPASAATMKKKAVGGGGCSHIGAPKAAASKCTRRNSTQNCLESGSSGAPS
GKQPGAASNVVMDETEDGEEESKFQHPRLRRAGGSGSGGGGGGGGGGSIRMKNFTPGGGA
ASSGSRRNSSKEPCHTHTEDAPAAPRPTAASRPTETQTPCPGDAAQRGETSRASGAEASG
SAVAVEVLNATAGDGRKSVAPISSMKCNKNGECRRDSGTGSLRSIISKQEKQTGGSGRAE
DGGSAKRGARNSTTASMDGSITPGGSMSGGHGGESANPGTTPVSSGVPEKKDSRVSFSNA
PSRKASSSLHGPTQTQTQQPRNSVTFLKSEDGPPIVPAEDAEPRGSQTTFMQRQFSNMLQ
PGVNKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVGNLIIIPVG
ITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFI
VDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEE
IFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMENDTWSE
LYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSS
RRQYQEKYKQVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVN
FNCRKLVASMPLFANAEPNFVTAMLTKLHFEVFQPHDYIIREGTIGKKMYFIQHGVCSVI
TKGTLAMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAF
ETVAIDRLDRIGKKNSILLHKVQHDLNSGVFNNQENEMIQEIVKYDREMVKLVDLQRPRA
MSMTPSVGGIFAPPGQPQSSSAIATLQQAVAMSFCPQMASPLVGPGTLQSPRMVRRFHVM
QSLASPVSMSPLQSQPPQAFGGAFGSAISSPPVQSPLAASGRTFQYMANAGPSGSQLSLV
QHHAPSPTQTQQRPASHKSTHSLHTGSLSQDNRALSASQLSLPQEGTPQAASAAPSPPPS
TRTSNNSIGPPQSSHPSLPGPSGVGRSVGAQQRVAFASTPPPGGPAGMGAVAAAAGSGPP
DSGVPKKDSIVSLPELDTARSRLSSNL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgtcatggaccggaatgaggtttcaccggcgtctgctgccaccatgaaaaag
aaggcggtgggcggcggcggatgcagccatatcggcgcaccgaaggctgccgcgtccaaa
tgcacaaggaggaacagcacccagaactgtctggagtccggttcctccggcgcgccgagc
ggtaagcagcccggtgcggccagcaacgtcgtgatggacgagacggaggacggagaagag
gagtccaagtttcagcatccgcggttgcgccgagccggtgggagcggcagcggcggaggt
ggaggaggaggaggcggcggcagtatcaggatgaagaactttacgccaggagggggagcc
gcgtcctcgggttccaggagaaactcaagcaaggagccctgccacacgcacacagaggac
gctcctgccgctccacggcccactgctgcctccagacctaccgagacccagacaccctgt
ccgggcgatgctgcccagcgcggcgagaccagcagagcatctggggcggaggcgtcggga
tcggcggtcgcggtagaggttttaaacgcgacagcgggtgatggtcgcaaaagcgtcgct
ccaatttccagcatgaaatgcaacaaaaacggagaatgcaggagggactcgggtaccggg
agcctgcgctcaatcatctccaagcaggagaagcagacaggagggtcggggagggccgag
gacggagggagcgccaagcgaggagcccgtaactcgaccacggccagcatggacggctcg
atcacaccaggtgggtccatgtccggagggcacggaggagagagcgcaaaccccggcact
acccccgtgtcaagcggtgtccccgagaaaaaagactccagggtgtccttctctaacgca
ccgagccggaaagcctcgtcctcgctgcacggcccgactcagactcagacccagcagccc
aggaactctgtcactttcctgaagtcggaggatggaccgccaattgtgccggccgaggac
gcggagcctcggggaagccaaaccaccttcatgcagcggcagtttagcaatatgcttcag
cccggagttaacaaattctccttacgcatgtatggtagtcaaaaagcagttgagagagag
caggagagggtcaaatcagctggaaattggattatccacccttacagcgatttcaggttc
tactgggatttcacaatgctaatgtttatggtgggcaacctgatcatcatccccgtgggc
atcaccttctttaaggaggagaccacgacgccctggatcatcttcaacgtggtctccgac
accttcttcctcatggacctggtgctcaactttcgcactggaatcatcattgaggacaac
tcagacatcattttggaccctaaaaccattaagaaaaagtacttaaaaacttggttcatt
gtggactttgtctcctccatcccagtggattacatattcctcatagtggagaaagggatc
gattcggaggtgtacaagactgctcgggccctgcggattgtccgctttaccaagattctt
agtcttctgaggctgctgaggctctccagattaatacgctacattcaccaatgggaagag
atcttccatatgacatatgacctggctagtgcagtgatgcggatctttaacctgattggt
atgatgctgctgctgtgtcactgggacggctgcctacagttcctggttccaatgctgcag
gacttcccctcagactgctgggtgtccctcaacaagatggagaacgatacctggtcagag
ctgtactcctttgccgtattcaaagcaatgagccacatgctgtgcataggttatggccga
caggccccggagagtctctcagatatctggctcaccatgctgagtatgattgtaggagcc
acttgctatgctgtctttattggccatgcgacagctcttatccagtccctggactcctcc
agacggcaatatcaggaaaagtacaaacaagtggagcagtatatgtccttccacaagctg
ccgtctgacttccgacagaaaatccacgactactatgagcacagataccaagggaagatg
tttgacgaggagagcattttgggagaactcagcgagcccctcagagaggaaatagtcaac
ttcaactgtcgcaagctggtggcatccatgccgctgtttgccaacgcagagccgaacttt
gtgacggccatgttgaccaagctgcattttgaagtgttccagccgcatgattacataata
agggaaggcaccattggtaagaaaatgtacttcattcagcacggagtgtgcagcgtcatc
actaagggcactctggcaatgaagctctctgacggctcttattttggagagatctgttta
ttgacgaggggtcggcgaacggccagcgttcgagcagagacttactgtcgactctactcg
ctgtctgttgaccacttcaatgaggtgctggaagaatatcccatgatgagacgcgccttc
gagactgtcgccatcgaccgtctagaccgcattggtaaaaagaactccatcctgttgcac
aaggttcagcacgatctcaactcgggtgtcttcaacaaccaggagaacgagatgatccaa
gagattgtcaagtacgaccgtgagatggttaagctggtggacctgcagcggccgcgggcc
atgtctatgaccccttccgtcggcggtatctttgccccccccggccagccgcagtcaagc
tctgctatcgccactcttcagcaggctgtggccatgagcttttgtcctcaaatggcaagt
cccctggtgggtccagggactctgcagtctcctcgtatggtgcgaaggttccacgtgatg
cagagcctggctagcccagtctccatgtctcctcttcagtctcaaccccctcaggcgttc
ggaggggcgtttggatctgcaatatccagcccgcctgtccaaagcccgctcgcggcttca
ggacggactttccaatacatggcgaacgcaggaccctcgggttcccagttgtccctagta
cagcatcatgcacccagccccacacagacccagcagaggcctgcctcacacaagagcacc
cactctcttcatacaggtagcttgagccaggataaccgagccctgtctgcctcccagctt
tccctcccccaggagggaacaccacaagctgcctctgcagcccctagccccccaccatcc
acccgcacatccaacaactccatcggtccacctcagtcctctcaccccagcctgccaggg
ccttcgggggttgggagatcggtaggagctcaacaaagggtggcctttgcctccacaccc
cctcccggcggacctgctggaatgggggcagtagcagcagctgctggatcaggacctcca
gactctggagttcccaagaaagattcaattgtcagccttccagagctagacactgccaga
tcccggctgtcttccaacttgtga
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