Etheostoma cragini (Arkansas darter): 117954279
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Entry
117954279 CDS
T07493
Symbol
tfr1a
Name
(RefSeq) transferrin receptor 1a isoform X1
KO
K06503
transferrin receptor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03273
Virion - Lassa virus and SFTS virus
ecra04144
Endocytosis
ecra04145
Phagosome
ecra04216
Ferroptosis
ecra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117954279 (tfr1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117954279 (tfr1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117954279 (tfr1a)
04145 Phagosome
117954279 (tfr1a)
09143 Cell growth and death
04216 Ferroptosis
117954279 (tfr1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117954279 (tfr1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117954279 (tfr1a)
04090 CD molecules [BR:
ecra04090
]
117954279 (tfr1a)
Peptidases and inhibitors [BR:
ecra01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
117954279 (tfr1a)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117954279 (tfr1a)
Exosomal proteins of colorectal cancer cells
117954279 (tfr1a)
CD molecules [BR:
ecra04090
]
Proteins
117954279 (tfr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
TFR_dimer
PA
DUF4731
Motif
Other DBs
NCBI-GeneID:
117954279
NCBI-ProteinID:
XP_034743846
LinkDB
All DBs
Position
12:complement(7723730..7739965)
Genome browser
AA seq
774 aa
AA seq
DB search
MDQARSTISKIFNGEPHSYTRFNLTQNMEGDNSQVEMKLSSDIDEEVGENGVGDNRNHNS
NRKPYVAQKLGRTPKNLCFMAAATLLIFIIGYLLGYLVHRKKDLAPTCAASVVRLDEEVA
HETGAASLMDWDDVKKLLSHKVTAANFEPVFREFSSANHRAGSPEDDALGNKVIQKFKEY
GMKTWTDEHFVKVQDRPTSGSNRVVFKNGNAMHPEGFLSYSATGQVTGAALYAYYGQESD
LSLLQDRSINMTGRVMLVRAGRISLAEKVANAAKMGASAVLIYPDATDYMNLDSIQLFGH
VHMGSGDPYTPGFPSFNHTQFPPVQSSGLPKILAQTITTNMAASILKQLGGQDGPTGWGV
LNKLGEESDQITVEVNNILTEKKINNVFGVIKGFVDADRYVVIGAQRDAWGPGFAASTVG
TSVLVELARSISDMVKNDGFKPRRSIVFASWSAGEYGSVGATEWLEGYVSSLSMKAFSYI
NLDGVVTGQKGFKVAASPLMHSLIESTLNEVNSPNNAGTLFSRFAKGNFESEVLVPLKLD
NAAYPFLTFSGIPSVSFGFTSDKSPSQFYTFFGTELDTWDKLNLATGNQVSQLAEIATRF
AGHMALRLVHDHLLRMDVMKYDKIIRTRVAQINGKVKAVQRLQPKRLPKDLTMQWLMSAS
GSYSRASRNLATDIQNSDLEDIEMCRIINDRIMAVERNFLSPFVSPRENPFRHILLGSGS
HSLEALSVHLDALRTDNPEADANLFRNQFALATWTIQGCANSLAGDVWSLDNEI
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggcaagatcaacaatatctaaaatttttaacggagagccacactcctacacg
cgtttcaacctgacccagaacatggaaggcgataacagccaggtggagatgaagctgtca
tcggacatcgatgaagaggtcggggaaaacggtgtgggagacaaccgtaatcacaactct
aaccgtaaaccttacgtggctcaaaagcttggacgcacaccgaagaacctctgcttcatg
gccgccgctaccctcctcatctttatcatcgggtacttgcttggctacctggttcatcgg
aagaaggacttggctcccacctgtgccgcctccgtggttcgtttagatgaagaagttgcc
catgagacgggtgctgcatccctcatggactgggatgatgtcaaaaagctcctttctcat
aaagtcactgctgccaattttgaaccggtctttcgtgagttttccagtgccaaccaccgg
gctggttctccagaggatgatgctctggggaacaaggtgatccagaagttcaaagagtat
ggcatgaaaacctggaccgatgagcactttgtcaaggttcaggaccgcccaacttctggc
tccaacagagttgttttcaagaatgggaatgcaatgcatccagagggattcctgtcctac
agtgccactggacaagtaacgggtgctgccttgtatgcatattatgggcaggaaagcgac
ttgagtttgctgcaggatagaagcatcaacatgactggcagggtcatgctggtcagagct
ggtaggatcagcttagctgagaaggtagcaaatgccgccaaaatgggtgcctctgctgtg
ttgatctacccagacgccactgattacatgaatttagactcaattcagctctttggacat
gtccacatgggttcaggggatccctacaccccaggcttcccctccttcaaccacacccag
tttccaccggtccagtcttcaggcctcccaaaaatcttggctcagacaatcacaacaaat
atggctgccagcattctgaagcaactcgggggtcaggatgggccaacagggtggggagtc
ctcaacaaactgggagaagagagcgatcagattactgtggaggtcaacaacattctcact
gagaaaaagataaataatgtctttggggtaatcaaaggctttgtggatgcagatcgatat
gtggttattggtgcccagagggatgcatggggtccaggttttgctgcatctaccgtcggc
accagcgtcctcgttgagcttgcacgttcaatttcagatatggtgaagaacgacggattc
aaaccaaggagaagcattgtgtttgctagctggagtgctggagaatatgggagtgttggc
gccacagagtggctagagggttatgtatcctctttgagcatgaaagccttctcctacatc
aacctggatggagttgtaacaggtcagaaaggatttaaagtggcagccagtcccttgatg
cacagcttgattgagagcactctgaatgaggtgaactccccaaacaatgctgggactctc
ttttctcgatttgcaaagggcaactttgaatcagaggtgttggtgcctctgaagttggat
aatgctgcttatcccttccttaccttttctggcattccctcagtatcatttggattcacc
tctgataaatctccctcccagttctacacgttctttggcacagagctggacacctgggat
aaactgaacctggccacaggcaaccaggtttctcagctggctgaaatagcaacccggttt
gctggtcatatggcgctgaggctggtacatgatcatctgctgcggatggacgtgatgaaa
tacgacaagattatacgtactcgagtggctcagatcaacgggaaagtcaaggctgttcag
agactgcagcccaagcggttgcccaaggacctgacgatgcagtggttgatgtcggcctct
ggctcctacagtcgcgcctctcgcaacctggcgacagacatccagaacagtgacctggag
gacatcgagatgtgccgtatcattaacgaccgcataatggcggtggaaaggaacttcctg
tcgccatttgtctctcccagagagaatcctttccgccacatcctgttgggctccggatct
cactctctcgaggctctgtctgtgcacctggacgccctcaggacggacaaccccgaggca
gacgccaacctgttccgcaaccagtttgccctggcaacctggaccattcagggctgtgcc
aactcactagcaggggacgtctggtctttggataatgaaatctaa
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