Etheostoma cragini (Arkansas darter): 117954425
Help
Entry
117954425 CDS
T07493
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117954425 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117954425 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117954425 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
CRLF2-like_D2
C2-set_3
C2-set_2
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
117954425
NCBI-ProteinID:
XP_034744102
LinkDB
All DBs
Position
12:complement(12328684..12351648)
Genome browser
AA seq
1506 aa
AA seq
DB search
MSGSVQVTQKLQHQRHQQQQQHHYESSCHLSTKSSVSRQSFSTYKTSSRRLQTTVKTEKG
KEVVKLSPLPKRAKRTYLAMDTDKEVIGYVVPVFRASHDVVRGLAEAQEEDVTEEGINYV
AMRNLFVREAREAMEVRVEKRTRTTHIRESAERMELGRTMEEWAEFRKKMNPDSLTHRPE
FIVKPRGQTVWEGKTVKLHCTVAGWPKPKIAWYKNNVLIDAKAHPEKYAIESNYNMHSLE
IKNCDFIDTAQYHVSALNVKGEVSSVATIVVKRFQEGKEAGPLDPKPHGFCAEHGVTFET
TIIDKFEVAFGHEGETLSLGCTVIVHPVVKKYQPEVVWYRNSVPLKPSKWVHTHWSGERA
TVTLVHLNKEDEGMYTLRVNTKSGFDTYSAYVFVQDADVEVEGVPVAPLDVRCYDANKDY
VVVTWKQPAVEGNSSILGYYIDRCEVGTHHWAQCNDAPVKYARFPVTGLVEGRSYIFRVR
ALNKEGVSRPSRVSEAVVAVDPSDRARLRAGPSAPFTGMIKFTEEDSTAGVVPGEPCDVV
VTEATKSYVVLAWKPPVQRGHEGVMYYIEKCISGTDIWQRVNTGMPVKSPRFALFDLAEG
KSYSFRVRCCNSAGVGEASVPTGDITVGDKLDLPSAPGIPVATRNTDTSVVVFWGASQVK
HLVGYYIEYTVVGTDKWIPCNNKPVKQTRFVCHGLTTGTNCVFRVKAVNAAGYSQSSSNS
DAVVVQAAISIPGKPTGVSLVEAVKDYMVLAWTAPANTGGADIRGYFVDYRTVKGDVVGK
WHEMNHKALTTTSYKAENLKENVFYQFQVRAMNMAGVSKASLASAALECKEWTITVAGAP
VGLHVLEVRDTSVVILWEPPAFNGRTPVNGYYLDVKKASAGEEGWKAAHEKANKMKYMKV
TGLKAGTSYVFRVRAQNLAGVGKPSAVLGPILAQTHPGNKEIYVDIDDDGVISMIFECSD
MKEGSEFVWSKNYQTITDTSRLTIITEKGKSRAIFNSPSLEDLGIFSCVVTNTDGISSSY
TLTEEGLKRLLDISHDHKFPVIPFKSEMAMELLEKGRVRFWTQVEKCTSACQVEYVFNDL
IITGGQKYTLNFDKSTGIIEMFMDSLEVTDEGTFTFNLVDGKAKGTTSLVLIGDEFRELQ
KKSEFQRAEWVRKQGPHFVEYLGFTVTQECNVLLKCKIGNVRPETEIIWSKDSIEIAEDD
DDAQKIERKDGDLTFNIGKWVIKQEKPKEKRKKPTAEDVPPPPRPKISKADAGIYGVILK
DDRGKDKSTFNLTDAGYQAVMNELFRVIANSSAEITVISTEHGIILSSMVTYYNDELRVG
WLHKDAKIATSERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKRVFDLTGKAW
EEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPVPEVSWTKNDR
ELVSDERYKLKFEHGKFASITITAVTTADSGKYALLVKNKYGKEAGEFTVSVYNPEEEEN
KEEKKG
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagtacaagtgacgcagaagctgcagcatcagcgtcatcagcagcagcag
cagcatcactatgagagcagctgtcacctaagcaccaagtcatctgttagccggcagtca
ttctccacttacaagacctccagccgtcgcctgcagaccactgtgaagacagagaagggg
aaggaggtggttaaactgagcccactacccaagagagccaagcgcacctacctggcaatg
gacacagacaaggaagttatcggctatgtggttcccgtttttagagccagtcatgatgtt
gtccgtggtctggcggaggcccaggaggaggatgttactgaggaggggattaactatgtg
gccatgaggaacctgttcgtcagggaggccagggaggctatggaggttagagtggagaag
agaacaagaacaacgcatatcagggaatctgccgaacgcatggaactaggcaggacgatg
gaggagtgggcagagttccgtaagaaaatgaacccagacagcctgacacaccgtccagag
tttattgtcaagccccgtggacagactgtctgggagggaaagactgtcaagctgcactgc
acagtggcgggatggcctaaacccaagattgcctggtacaaaaacaatgtgctcattgat
gctaaggctcaccccgagaagtacgcaatcgagagcaattacaacatgcactccctggag
atcaagaactgtgatttcatcgacactgctcagtatcatgtctctgccctcaacgtgaaa
ggggaagtttcctctgtggctactattgttgtaaaaaggttccaggagggcaaggaagca
ggcccactcgatcctaaaccacatggtttctgcgctgagcatggtgtcacctttgaaaca
actattattgacaaatttgaagtggcttttggccatgaaggcgagactttgagtctgggc
tgcactgtcatcgttcatcccgttgtgaaaaaataccagcctgaagtggtctggtacaga
aactctgtccctttgaagccctctaaatgggtacacacacactggtctggggaacgtgcc
acagtaacacttgtccacctaaacaaggaagatgagggcatgtacaccctgcgtgtcaac
accaaatctggctttgacacctactctgcttatgtgtttgtccaagatgccgacgtggag
gtggagggggttcccgtggccccgctggatgtccgctgttatgatgccaacaaggactat
gtggtggtgacctggaagcagccagcggtggagggcaacagctccatcctgggatactac
atcgacaggtgtgaggtgggcactcaccactgggctcagtgtaatgatgccccagtgaag
tatgcacgcttccctgtcacaggactggttgaggggcgttcttacatatttagggtgcga
gccttgaacaaggaaggagtcagtcgtccatctcgtgtctctgaggccgtggttgccgtg
gatccctcggacagagctcgtctacgagctggcccctcagctccttttactgggatgatc
aagttcacagaggaggattctactgcgggtgttgtccccggagaaccctgtgatgttgtg
gttaccgaggcaaccaagagctacgtggtactcgcctggaagcctccagttcagaggggt
catgaaggggtcatgtattacattgagaagtgtatttcagggacagacatctggcagagg
gtgaacactggtatgccagtcaagtctccccgctttgccctgtttgacctggcagagggg
aaatcctacagcttccgtgtgcgctgctgcaactccgctggcgtgggcgaagcctctgta
cccacgggagatatcacggtcggtgacaaactggacctgccctcagctccaggcattcca
gtggccaccaggaacactgacacctcagtggtggtattctggggggcctctcaggtcaaa
cacctggttggctactatattgaatataccgtggtgggcactgataagtggattccttgt
aacaacaaacctgtcaagcagaccaggtttgtgtgccacggcctgactaccggaacaaac
tgcgtgtttagggtcaaggcagtcaacgctgcaggttacagccagagctcctccaattct
gacgctgtggttgtgcaggctgccatctccatccctggaaaacctactggtgtgagcctg
gtggaggctgtaaaggactacatggtgctggcctggactgcgcctgctaacactggagga
gccgatatcaggggatattttgtggactacaggaccgtgaagggagacgttgtcggaaaa
tggcatgaaatgaaccacaaggctttgactactacctcctataaagctgaaaacctgaag
gagaacgtcttctaccagttccaggtgcgcgctatgaacatggccggcgtgagtaaagcc
tccctggccagtgcagctctggagtgcaaggagtggaccattactgtggcaggtgctcct
gttggtcttcatgtgttggaggtccgtgacacatctgtcgtgatcctgtgggagccacct
gcatttaatggccgcactcctgtcaatggctactatttggatgttaagaaggcctctgct
ggagaggaaggctggaaggctgctcatgagaaggccaacaagatgaaatacatgaaggtg
acagggctgaaggctggtacatcctacgtcttccgtgtgcgtgctcaaaatcttgctgga
gttggaaagccctccgcagtcttaggtccaatcctggcccagactcatcctggcaacaaa
gagatttatgtggatatcgatgatgatggtgtgatatctatgatctttgagtgctctgat
atgaaggagggctctgagtttgtttggtccaagaattaccagactataacagacacctct
cgcttgactattatcactgagaagggcaagtccagagctatcttcaacagtccctcccta
gaggatctaggcatattctcctgtgtggtcaccaacactgacggcatctcctccagctac
acactaactgaggagggtctcaagcgtcttctggacatcagccatgaccacaagttccct
gttattccctttaagagtgaaatggccatggaattgctcgagaagggtcgcgtgcgattc
tggactcaggtggagaaatgcacttccgcctgccaagtggagtatgtctttaatgatctc
atcattactgggggacagaaatacacactaaactttgacaagtccaccggcatcattgaa
atgttcatggactctctggaggtcacagatgagggaacgttcacctttaacctggtggat
ggcaaggctaagggcacaactagtctggtgctcattggagatgagttcagggagcttcaa
aagaaatctgaatttcaaagggctgaatgggtcaggaaacaaggtcctcactttgtggag
tatcttggcttcactgttacccaagaatgtaatgtgctgttgaaatgcaagataggaaat
gtcagaccagagactgagatcatctggtctaaggacagcattgagattgcagaggatgat
gacgacgctcagaaaattgagagaaaggacggggatctgacctttaatatcggaaagtgg
gttattaagcaggagaaaccaaaagaaaaaagaaaaaagccaactgcagaggacgttcca
ccaccaccaagacccaaaatctccaaggcggatgcgggtatttatggggtcatcctgaag
gacgacagaggcaaagataagagcaccttcaatctgacagacgcaggataccaagctgta
atgaatgagctgttcagggttattgccaactcctccgctgaaattacagtcatcagtact
gaacacggcatcatcctctcctccatggtcacatattacaatgatgaactgcgtgttggt
tggctccataaagatgctaagattgccacctcagagagagttaagtctggagtcacagga
gagcagctttggcttaaaatcaatgagcccactgagaaggacaaaggcaaatacaccatg
gacatctttgatggcaaggacggtgtaaagagagtctttgatctgactggcaaggcatgg
gaagaggcatttgaagaattccaaaggctcaaggcggcagcaatcgcagagagaaatcgc
gctcgtgttgttggaggcttgccagatgtggttgcgatccaagagggcaagtccctgaac
ctgactggcaatgtatggggcgagccggtacctgaggttagctggacgaagaacgataga
gagctggtatctgatgagcgctacaaactcaagtttgagcacggcaagtttgccagcatc
acaatcactgctgtcaccacggctgactcaggcaaatacgccctcctggtcaagaacaag
tatggcaaagaagctggcgagttcaccgtcagcgtctacaacccagaagaggaggagaac
aaggaggagaagaaaggctaa
DBGET
integrated database retrieval system
