Etheostoma cragini (Arkansas darter): 117954431
Help
Entry
117954431 CDS
T07493
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117954431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117954431
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117954431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
117954431
NCBI-ProteinID:
XP_034744112
LinkDB
All DBs
Position
12:complement(3825546..3853995)
Genome browser
AA seq
2500 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGIQNKLEKFVTELQNANEALRTQHERFKADSEQQYFDIDKR
LAESQEQILSATKDLQTLKEENKKLNEELSTLKGIEGETSEDKPSQQQTKAKYEIEAEKR
ELARMLEKRTQEVENLNEDVKRLNEKLTETSKVKTELQMKLDGVQSSEASVQHREKRMEQ
EKELQEQKIEWLTRQLKTKTEELLNTNREKGKEILELRCGLKNSKEQVTRLERQLTSLEQ
TSESQRERADDLNNKLKQSKDEQSSMEEKYRNELNAHVKLSSLYKGAATDMETKNQELSR
ALEELSKLVKETGEANKALEKKVSEGEELKQRLEAELREKIKKMEKELENATMKAAGKHC
CVPSLSEEQLDTMCPSAAAIAAIVKPGMKFFDLYNAYAECQTHLQLEKQETRRVSRVLDE
IVQEIESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKEEAKQRCDTMERN
KMRTERQLEDTSAQVCSLLVELEEARGNQVTKEDGSSANISSTSEVISPPQLSFRSVEEL
QKQNQSLLSRLRELEEEKDRQQSQVTSARVSELEASVEKLKKEVEQLKEQRNQQNQLADS
NARQRDMYKVLLTQNTGFSLPTQGSDSSSNPAHVRPSVPATRSTPQRATAAESAQTAQAR
AALKQLNDAFTLYKKEKAENDKMLNETNDRLQKQLTDLRSSHAKLTSQLEFSSKRYEMLQ
DTVSAYRREISALQDRNQKMAATAQRHEHIIHTMSQDLRQANEKLALEEVRVENLTKERD
MLRQAESRLNREKEAMLADQRNQNLLLTNLKTIQLTMERTETETRQQLNNKIEHLEAELS
LMKTRLDQEVAQRHALGRTMDAQLLEAKKQLETQNTLQQKTRELLCSAEQQVAALKAQLA
SASTEAVTTPSNTANSATRAAGLRAPLRVRSPGPAASQQLNQSEQALAELKSLLRTAEEQ
NNELAEQLKNANATVEQYRAVVLTLEDSLKKEKESRSPLELRLKESQEVQKQLEKRILEL
EIMKQQEREERRKAVDAVEKQLYEVQRSLKSSQAEQQEALERATSAVTLEQKAIQESLLQ
TKLAGEAQAKYERELMLHAADVEALQELKKRIQQDAVQKRELEEQLSKTSSILQEKTAAL
NTVERQLKEDLSNKSRRCEELVKQNVLLHQQMDEMASKGRLLQNQPQQLDLSFSEEGKTT
EQILEILRFVRSEKEIAVAQCDASDREALRYKQRVEHQDRQLKELEEALNSEREKMQATA
KTLAQQEEQLKKMENIGALQETNRMLKMDRDKLEQELQQAQAKVTKLQSDISPLHHSLSQ
LSEKNGSLQADKRILEEDLKRWKAKTQQLLSQQKDGDVEERQKLATEKDAQQKRITQLAE
ETAKLKTELARSSASSNSAQSQLQALRDSVARLTSERDTLKKDLETKNTDILEKNKTITQ
VKKIGRRYKTQYEELKVQHDKLVEETTAKAGSEASPSQEVQQELTKTQEECNKAREDLNT
LKAELQKKLEEAQKSQQEFEEYKKENQQTMEKLQQTETQLQQNQNLLTQAQKDLQQTKTH
SQQVQNQLKLAQSQAQARQNQIQQIQRELQQGKEALQQNLANQKELQQTQQSSQQSHNQE
VSNIKTALSQAETKATELQSQLDSLQKIIGEREADIKRLQEQLTEANQANEAGRATQANQ
SQSSQSNQASDATVASDGNQALLEELAKLRQELSESKNREEQLRQQIAEKEEKTKKVFMG
AKTKINQLNSAKEKLTQEIEQVKQSKEELEVRMNALKSQYEGRLLRLDRELRELRETQAP
SDPREEPQDQSGAKAGDQTRSADQRPISLKSPAQDRGSSSLSDPPTANIRPTTSTPSPSN
KPSPSPGNKATPRASIRPMVTPATVPIPTPTATVMPTTQNDSQEVLMSSGASVHSTSSSL
VNTATSITQPTSTQATAFVQPTQQQAANQDAGPSVEAERPSTSSSVGGTGSKRGREDEEE
ESRPESSHTPPTTKKLRLKPTIALQMEGDEEIEGELRDEGERQDSPEDSQELPEDCYPVL
AEDDEDIEEVSQSVPSDIMSSQSPAIIRDVIVIDTDSESRESKDGEEKQEDEGEEEEEEE
DEEEEGYKEEEEDDDDEDDAGDSGIRGREESNEESREAEEGAGEDEPSESTNAEDNVCGA
SSDSQRPSEPSHSNEGSSSATSESEPPRDPVHFPPTSSPSAPSPSPSITPRLPHPRRPPH
PLPPRLYIQPPAPELGPPHTQRQSSQLRRPSVGRGPQLTPGIGSMQHFFDDDDRMVPSTP
TLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQTSASHSDLGQLASQGGLGMYES
PLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDNMASQSVPMVTTSTGMASAA
DDGDEVFMEQEGEGPGIESSLESRTDMESTGQQGDDASLPSTSQDPDTSSGTQRRTVSSL
ISSLSGRGTRGGRVEARTLLTRRGTFSRGRGGAMGRGGIA
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaagttctggagcggacggagttaaataaactcccgaaagga
atccagaacaagctcgagaagtttgtaacggagctgcaaaatgctaacgaggcgctcagg
acgcagcatgagcggttcaaagcagacagtgaacagcagtactttgacattgacaagaga
ctggcggaaagtcaggaacagattctgtcagccaccaaagacctgcaaacactaaaggag
gaaaataaaaaactcaatgaagagctgagcactctaaagggaatagagggagagacctct
gaagataaaccatcgcaacagcaaaccaaagccaagtatgagattgaggcggagaagaga
gagctggcgaggatgttggagaagagaacacaggaggtggaaaacctcaacgaggatgtc
aagcgtctgaatgagaagctgacagagaccagcaaagtgaagacggagctacagatgaaa
ctagatggtgtccagtcatcggaggcttctgtgcagcaccgagagaagcgaatggagcag
gagaaagagttacaggagcagaaaattgagtggttaactagacaactgaagaccaaaact
gaagaactgttgaacaccaacagagagaaaggcaaagagatactggaactacggtgtggt
ctgaagaacagcaaggaacaggtgacaaggctggaaagacaactcacctctctggagcaa
accagtgaaagtcagagggaaagagcagacgacctcaacaacaaactgaaacagtctaaa
gacgagcagagttccatggaggagaaataccgcaatgagctcaacgctcatgtcaagttg
tcttccctctacaagggggcagcgacagacatggaaacaaagaatcaagaactgagcaga
gcgttggaggagctcagcaagctggtcaaagaaactggtgaagccaataaggctctagaa
aagaaggtgtcggagggagaagaactgaagcagcggcttgaggcagagcttagagagaag
atcaagaaaatggagaaagagcttgaaaacgccacaatgaaggctgctggcaaacactgc
tgtgtgccttctctgagtgaggagcagttggacaccatgtgtccatcagcagctgccatc
gctgccattgtcaagcctggcatgaagttctttgatttgtataatgcgtatgcagaatgt
cagacacaccttcagcttgagaagcaggagaccaggagggtgagcagagttctggatgag
attgtacaggagatagagtccaaggctcctgtcctcaagcgtcagcgagaggagtacgag
agcatgcagaggtccatggcctctctgtgcaacaagctggaacaggctcgaacggagatt
tacagtttgcagaaagagaaagaggaggccaagcagcgctgtgataccatggagagaaac
aaaatgaggacagagagacagctagaggatacatctgcacaggtgtgctctctcctggtg
gagctggaggaagccagaggcaaccaggtgaccaaggaagacggcagctccgcgaacatt
tccagcacctctgaagtcataagtccaccccagctgtccttccgcagtgtggaggagctg
cagaagcagaaccaaagtctgctgagcaggctgagggagctggaggaggaaaaagacaga
cagcagagccaagtgacatcagcgcgtgtgtcagagttggaggctagtgtggaaaagctt
aagaaggaggttgagcagctgaaagagcagaggaaccagcagaatcagctggctgactcc
aacgccagacagagagacatgtacaaggtcctgttgacgcagaacaccggcttcagcctg
cctactcaaggttcggattcttcgtccaaccctgcacatgttaggccttcagtcccagct
actcgctccactcctcagagagctactgctgctgagtcagcacagactgctcaggctaga
gctgctttaaaacagctgaatgatgccttcactctgtataagaaggagaaggcagagaac
gacaagatgttgaatgagacgaacgataggctacagaagcagctgacggatcttcgctcc
agccatgccaagctgacctctcagctagagttcagcagcaagaggtacgagatgctccag
gacactgtatcagcctaccgtagagagatctctgccctgcaggacaggaaccaaaaaatg
gctgcaacggcccaacgacatgaacacatcattcacacaatgagccaggacctccgacag
gctaacgagaaactggccctggaggaggtgcgagtggaaaacttgactaaagagagagac
atgttgagacaagcagagagtcgactcaatcgagaaaaggaagccatgctggctgaccaa
cgtaaccagaacctgctgctcaccaatctcaagactatacagttgactatggagcgtaca
gagacagagactcgccagcagctgaacaacaagatagagcatctggaggcagaactgtct
ttaatgaagaccaggctggaccaggaagtagcacagagacatgcccttggacgcactatg
gacgctcagttattagaagctaaaaaacagctggaaacacagaacaccttgcagcagaag
accagggagttgttgtgtagtgctgaacagcaggtggcggcactgaaagcccagttggct
tctgcttccactgaggccgttaccacccccagcaacacagccaactctgctaccagagct
gcaggcctcagggcaccacttagagtacgctctccaggacccgcagcctcccagcagctc
aaccaatcagagcaggcgcttgcagagttgaaatctcttctgcgtactgctgaggaacaa
aataacgaactagcagagcagctaaagaatgccaatgctactgtagagcagtacagggct
gtggtactgaccctggaagacagtctgaagaaagaaaaggagtctcgctcccctcttgag
ctccggctgaaggagtcacaggaggtgcagaagcagctggagaagaggattttagagttg
gagataatgaaacagcaggaaagagaagagaggagaaaggctgtggatgcagtggaaaaa
caattgtatgaggtgcagcgcagtctgaagtccagccaggcagagcaacaggaggcactg
gagagagctacctctgctgttacactggaacagaaggccatacaggaaagcttgctgcag
actaagctagctggagaagcacaggctaagtatgagcgggagctcatgcttcatgctgct
gatgtagaggccctgcaggagctgaagaaaagaatccaacaagatgcagtgcagaagagg
gagttggaagagcaactgagcaaaacctcgtccatcctgcaggagaagactgcagcttta
aacacagtggagagacagctgaaggaggatctgtccaataagagtcgtcgctgtgaggag
cttgtgaagcagaatgttctcctgcaccaacagatggatgaaatggccagcaagggtcgt
ctgctgcaaaaccagccacagcagcttgacctgtcattcagtgaagagggcaagaccact
gaacagatattagaaatactcaggtttgtgcggagtgaaaaggagattgctgtggctcag
tgtgacgcgtctgatagagaagctcttcgctacaaacagcgagtggaacaccaagacaga
caattgaaggagctagaggaagctctgaactctgagcgggagaaaatgcaggctacagca
aagactctggcccagcaggaagaacagctgaagaagatggaaaatattggtgctctccaa
gaaaccaacaggatgctgaaaatggaccgagataaactggaacaagagctgcaacaggct
caggctaaagttacaaagctccagtcagacatcagcccactacatcactctttgtctcag
ctgtcagaaaagaatggctccctgcaggctgataagaggatactggaagaagaccttaaa
cgctggaaagccaaaacacagcaactgctcagccaacagaaagatggcgatgttgaggag
agacagaaacttgccactgagaaagacgctcagcagaaacgcatcacacagctggctgaa
gagacagccaagctgaagactgaactggcaagatccagtgccagcagtaactcagctcag
tctcagctgcaagccctcagagactccgtagcccgtctgacgtcggagagagacactctg
aagaaagacctggaaacaaaaaacacagacattctagagaagaacaagaccatcacccag
gtcaagaagattggacgacgctacaagacccagtatgaggagctcaaagttcagcatgac
aagctggttgaggaaacgactgctaaagcaggaagtgaggcaagtcccagccaggaggtg
cagcaggagctgaccaaaacccaggaggagtgcaataaggccagagaggacctaaacaca
ctgaaagcggaattgcagaaaaaactggaggaggcccagaagtcccagcaggagtttgag
gagtacaagaaggaaaaccagcagaccatggaaaagttgcagcagaccgagactcagctg
cagcagaatcagaacctgctgactcaggctcaaaaagaccttcagcaaaccaagacccac
agccagcaggtacagaaccaattaaaattggctcagtctcaagctcaggcccgtcagaac
cagattcagcagatccagagggagctccagcagggtaaagaagcccttcagcagaacctt
gctaatcagaaagagctgcagcagacccaacaaagcagtcaacagagccacaaccaggaa
gtcagcaacatcaagactgctctcagccaagcagagaccaaggccaccgagcttcagagc
caactggacagcctacagaagataattggtgagcgtgaagcagacattaagcgtcttcag
gagcagcttactgaagccaaccaggccaatgaagctggccgagccacacaggccaaccag
agccagagttcccagtccaaccaagccagtgatgctacagttgctagtgacggtaaccag
gcactgctggaagagctagctaaactcagacaagagctgtctgaaagcaagaacagggag
gagcagctcagacagcagatagctgaaaaagaggaaaagactaagaaggtcttcatgggg
gccaagaccaaaataaaccaactaaacagtgctaaagagaagctcactcaggagatagaa
caagtgaaacagagtaaggaggaactggaggtgagaatgaacgccctaaagtcccagtat
gaaggacgacttcttcggctggacagagagctgagagaactgagagagacacaagcaccg
tccgaccccagagaggaaccacaggaccagagtggagctaaggctggcgatcagaccaga
tctgcagaccaaagaccgatatctttgaagagccctgcccaagacagggggagctccagc
ctgtccgaccctcccactgccaacatccgccccaccacaagtactccatctcctagcaac
aagccaagcccctcccctggtaacaaggccacaccccgtgccagcatccggccaatggtt
accccggcaactgtccccatcccaacacctactgccacggtcatgcctaccacacaaaat
gacagccaagaggtgctgatgagttcaggagcctctgtacactctaccagctccagtctg
gtgaacacggccacatcaataactcagccaaccagcactcaggccactgcttttgtccag
cccacgcagcagcaggcagccaatcaggatgcaggccccagtgtggaggcagaacgacca
tctacgtcctcctctgtgggtggaacaggttcaaagcgaggcagagaggacgaggaagag
gagagcagaccagagagttcacacacacctccaaccactaaaaaacttcgacttaaacca
acaatagcattgcagatggagggggatgaggagattgaaggagagctgagggatgaagga
gaaagacaggattcaccagaggacagtcaggagcttccagaggattgttaccccgtttta
gctgaagatgacgaagatatcgaggaagtgtcccagtctgtcccctctgatattatgtcc
tctcagagccccgctattattcgggacgtcatcgtgatcgacacagacagcgagagccgt
gagagcaaagatggggaggagaagcaggaagacgaaggtgaagaggaagaagaggaagaa
gatgaagaagaagaggggtataaagaagaggaggaggatgatgatgatgaggatgatgct
ggtgacagcgggataaggggacgagaggagagtaacgaggagagcagggaggcagaagaa
ggagcaggggaggatgagccatcagaatccacaaacgctgaggacaacgtgtgtggagcc
tcttcagactcgcagcgtccctctgagccgtcacacagcaatgaaggcagcagtagcgcc
acatcagagtccgagccccccagagaccctgtacacttccccccaacctcctccccctct
gcaccctccccctccccctccattacaccccgcctaccccacccacgtaggcccccacac
cccctcccaccacggctctacatccaacctccagctccggagctcggacccccacacaca
cagagacagtcctctcagctgcgcagaccatcagtaggacgaggacctcaactaacccca
ggaataggcagcatgcaacatttcttcgatgatgacgacagaatggttcccagtactccc
actctggtagtcccacaccgcactgatggctttgccgaagctatacattctcctcaggta
gcaggtctgtccactaggttcaggtttggacctccagaagacctactgcctcagacatca
gcctcacactctgacctgggacagcttgcctctcaaggaggtctggggatgtatgagtct
cctctgttcctcgctgctcatgatgaagacggaggaggaaggagtgtccccaccacgcct
ttacaagtggctgcaccagtgacggtcttcacagagtctctaccctcagacagtggtgac
aacatggcatcccagtcagttcccatggtaaccacctccaccgggatggcttctgctgca
gatgatggagatgaagtcttcatggagcaggaaggagagggtcctggtattgaatcgtcg
ttggagagccggacagacatggagtcaacaggacagcagggtgatgatgcatcactgcca
tctaccagccaggaccctgacaccagcagtggtactcagcggcgcacagtgagcagtctg
atcagcagcctgtcaggcagaggaaccagaggagggagagtcgaggccaggaccctactc
acccgcagaggtactttctctcgtggaagaggaggagccatgggcagagggggcattgcc
taa
DBGET
integrated database retrieval system
