Etheostoma cragini (Arkansas darter): 117954594
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Entry
117954594 CDS
T07493
Symbol
tgs1
Name
(RefSeq) trimethylguanosine synthase isoform X1
KO
K14292
trimethylguanosine synthase [EC:2.1.1.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117954594 (tgs1)
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
117954594 (tgs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_31
UPF0020
Methyltransf_11
PrmA
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
117954594
NCBI-ProteinID:
XP_034744411
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Position
12:complement(3238633..3249932)
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AA seq
827 aa
AA seq
DB search
MMLERSRVTVVADIFFSRRLPSKEEEEEEKIHCLCSRAFVQDRELYRSDNRFLSSDLGVP
GAHEAEEEEEGEAEVEEEEVLDEETQLMASMGLPLAFVCSSDIRRARRRSNRKPAAHWAE
SAEEDEEQHDLQVDNKVVEEKEVRDPPEDGAHETQDAGWETYWAQQGEALLWSSWLEKHP
GTDPGAVAALWDDLDTKAVWDKHATETYYSYWEQYSYWSAQGWTADQSVWDGNTGGGEAA
AAAGGGMSMETHTEEWRNGQTGAESQPIEEEEAKARHYDDDDDEVLNDLFGQSCTLEAAG
RSDSEIDSQCVSVADADRPSDGGNRNKRPVASSQDNTAEHTGSQQHAGSSNRQYGSRNKM
LNREDDDDDDKPPEGGHAKVKRSHELDVEESPHLTPEAAWTKLGLKHNPEPLFDSVLSFK
DNAGQKHQEQRWAKRAVRRISKHTRFPETCGDKNTQPRISSSLTKVKNFLEKNQRETQMT
PCNQGEMGGGSTQELEDKLAFLEKVTGEERKTSRENIKSAEEGNTEAVEEDSSNSLSSLD
AEPTLNCASGTVDSERMEEEEEDQPGRQPPCQEIPDFLISDTPEGNTELSLKNGKKPKNK
KSKRARKKPVPPEMAAEPELAKYWAQRYRLFSRFDEGIQLDREGWFSVTPERIAEHIALR
VEHSFPDSQLVIDAFCGVGGNAIQFALTGKRVLAIDIDPVRLNLARHNAMVYSVADRIDF
LQGDFLQLAPRLRGNVVFLSPPWGGPDYLTAEVFDIKTMMQPDGFEIFRLAKLISDNIVY
FLPRNADMDQIASLAGPGGKVEVEQNLLNNKLKTVTAYFGSLIKSDS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcgagaggagcagggtgacagtggtggcggatatcttcttcagcaggagactc
ccatccaaagaggaggaggaggaggagaaaatccactgtctctgctccagagcctttgta
caggatcgggagctgtatcgttccgataacagattcctctcatctgatctgggggtccct
ggagcccacgaagccgaagaggaggaagaaggggaggcggaggtggaggaagaggaagtg
ttggatgaagagactcagctgatggccagcatgggtcttcctctggcctttgtctgctcc
tctgacataaggagggcgaggaggaggtctaacaggaagcctgccgcacactgggcagaa
tctgctgaagaggacgaagagcaacacgatttacaggttgacaacaaagtagttgaagag
aaggaagtgcgggatccaccagaagatggagcacatgagacccaagacgctggctgggaa
acctactgggctcaacagggtgaagctctgctgtggagcagctggctggagaaacatcca
gggaccgatcctggagcagtggcggctctttgggatgacctagacactaaagctgtctgg
gacaaacatgccacagagacttactactcctactgggagcagtactcgtattggtcagcc
cagggatggacggctgaccagtctgtctgggatggaaacactggcgggggagaagcagca
gcagcagcaggaggggggatgagcatggagacgcacacagaggaatggaggaatggacag
actggggctgagagccaaccaatagaagaagaagaagccaaggctcgtcattatgatgat
gatgatgatgaagttttgaatgatctgtttggacagagctgcacattagaagcagctggg
agatctgactcagagatagacagccagtgtgtgagtgtggctgatgcggatcgtccttct
gatggtgggaatagaaacaagagacctgttgcatcttcacaggacaacacagctgaacat
acaggttcccagcagcacgccggcagctctaacagacagtacggctcaaggaataagatg
ctaaatagagaagatgatgacgatgatgacaaacccccagaaggaggacatgctaaagtc
aaacgcagtcatgagctggatgtggaagagagcccacatttgacacctgaggcagcctgg
accaaactgggactcaaacacaaccccgagcctctgttcgacagcgtgttaagcttcaaa
gacaatgctggtcagaagcatcaggagcagcggtgggctaagagagcagtccgccgcatc
agcaaacacaccaggttcccagagacgtgtggagacaagaacacacagccacggatcagc
agctccctcaccaaggtcaaaaacttcctcgaaaagaaccagagagagacacagatgact
ccatgtaaccagggtgagatgggaggaggaagcacacaggaactggaggataagcttgcc
tttctggaaaaagtaacgggagaagaaaggaagacgagcagggagaatataaaaagtgct
gaggaaggaaatacagaggctgtggaggaagatagttctaattctctgtccagtttagat
gcagagccaactctcaactgtgcttctggaactgtggatagtgagagaatggaggaggag
gaggaggatcagcctggtagacagccaccatgtcaagaaattcctgactttcttatatct
gacacacctgaaggcaacactgagttaagcttgaaaaatggaaagaagccaaagaacaag
aagagcaaacgagcgaggaagaagccggtcccaccagagatggcggctgaaccggagctg
gctaaatactgggctcaacgctacagactcttctctcgcttcgatgaagggatccagctg
gaccgagagggctggttctctgtgacaccggagaggatcgctgagcacatcgccctcagg
gtggagcacagcttcccggactctcagctggtcattgacgccttctgtggtgtgggaggg
aatgccatccagttcgccctcactggaaagagagtcctggccattgatatcgacccggtg
cgcttgaacttggcacggcacaatgctatggtttacagcgtcgctgaccgaatcgacttc
cttcaaggggactttcttcagctggcaccccgtctccgtggcaatgtggtcttcctttca
ccaccatggggagggccagactacctgactgctgaagtgtttgacatcaagaccatgatg
cagcccgatggatttgagatattccgcctggccaaactgatatcagacaacatcgtgtac
ttcctgcctcgcaatgctgacatggatcagatagcctctctggctggtccaggagggaag
gtggaggtggagcagaacctcctcaacaacaagctgaagaccgtgaccgcttactttggc
agcttgataaagtccgacagctag
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