Etheostoma cragini (Arkansas darter): 117954598
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Entry
117954598 CDS
T07493
Name
(RefSeq) double-stranded RNA-specific editase B2-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117954598
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117954598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
117954598
NCBI-ProteinID:
XP_034744420
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All DBs
Position
12:1893589..1949299
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AA seq
756 aa
AA seq
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MAPVHGTCSGNMERSERNLKGKSKRKRRRRRCKGKGRVPMLSTLLRPIGHWDTGQSSAED
ADSLSTSSLEVKENKDDKGQVDCDLLRKYHPSTFCTTFPKRGSRALKRKQPLAEGKDRLL
YQSPLTCKRAAWAVAQKNAVVQLNELRPGLRYEIVSKTGPLHAPLFSVGVEVNGFHFEGR
GPTKKQAKMRAAELALRSFIQFSNAPQAHASMGNFTGTPADFTADELDIHESFLKEFEPS
LMENCDLLHCNTAKNKVFYSIYNHRRLVRLTLDLFSTNPKRRALSSSLLDRLSPVALLNE
LRPGLRYMCMTERVHGRPMRRFVMVVRVEGRVFEGCGHSKRLAKARAAAAALQSIYNVTL
GPERKGLGLHGSRARHQLPQFFAESIFHLVREKYSELTDGGLSTSSQARHKVLAGIVMTR
GFDLRSAQVVSLATGTKCLDSDHVRDHSGTLRDCHAEVLSRRALVRFLYAQLELLLDPAG
SEEQSIFVPNTGGGGVRLQDGVLFHMYVSSSPCGDARLNCPYETTAAYPSRRLRCHLRVK
VDGGEGTLPITAPMANVNRTGVPQGKRPVTMSCTDKMAKWSVVGLQGALLSHLVEPVYLH
SLTVGTLHHTGHLGRAMARRLAPVKNLLLPYRRQQLLLGCLNSSEVRPTGRAPHVSVNWT
RGDGGLEEISTSTGRRKDSGTPSRLCKRSMFARWLRLQQQSQFKAADTTPGTYSASKMAA
GRYQRAMQQFISALQGGGLGSWLRKPPELGHFNVSV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggtgcatgggacctgcagcgggaatatggagcggtcggagcgcaatctgaag
ggaaagtccaagaggaagaggaggaggaggaggtgtaaaggcaaaggccgagtccccatg
ttatctacgctgctccgccccataggacactgggacactggacaatcatcagctgaggat
gccgacagtttaagtacaagcagtttggaagtaaaagagaacaaagatgataaaggccag
gtggactgtgacctactacggaagtatcacccgtcgaccttttgcacaactttccccaaa
cgtggatcgagagctttgaagaggaaacaaccgctggcggaagggaaagaccggctgctc
taccaaagccctttgacctgtaagagagcagcctgggctgtcgctcagaagaacgcggtg
gtccagctgaatgagctccgacccggtctgcggtacgagatcgtgtcaaagactggcccg
ctgcatgctccgctgttttccgtgggcgtggaggtgaatggtttccacttcgagggcaga
ggaccaacaaaaaagcaggccaagatgagggctgcagaactggctctccgctcgttcatc
cagttctcaaacgccccccaggctcacgcctccatggggaacttcaccggcacgcctgcg
gacttcacagcggatgaactggacatccatgagtcattccttaaagagtttgagccatcg
ctgatggaaaactgtgatctcctgcactgcaacacggcgaaaaacaaggttttctacagc
atttacaaccacagacgactcgtccgactcacactggacttattctccaccaatccaaaa
agacgagcccttagcagctcactgctagaccgcctcagcccagtggcgctgctcaatgag
ctgcgaccaggactcaggtacatgtgcatgacggagagggttcacggcaggccaatgagg
agatttgttatggtcgtgcgagtggaggggagggtttttgaaggatgtggccacagcaaa
agactggccaaggctcgagcggcagcagccgccctgcagtccatttacaacgtaactctg
ggaccggagaggaaggggctgggcctccacggcagcagagccagacatcagctacctcag
ttcttcgcagagtcgattttccacctggtgagagagaaatactccgagctgacagacggc
ggtctctctacctcctcacaggcccgccacaaagtcctggcagggatcgtgatgaccagg
ggttttgacctcagatcagcgcaggtcgtgtctctggctacggggactaagtgtctggac
tcagaccacgtgagagaccatagcgggacgctcagagactgccacgctgaagtcctgagc
cggagggcgctggttcgattcctgtatgctcagctggagctgctgcttgatccagcaggc
agcgaggaacagtcgatcttcgtaccaaacacaggcggcggtggcgtccggctgcaggac
ggcgtcctcttccacatgtacgtcagctcgtcgccgtgcggagacgctcgactcaactgt
ccctacgagaccacagctgcatatcccagcaggaggctccgctgtcacctcagggtgaag
gtggacggaggcgaggggacgctgcccatcacagcgccaatggccaatgtgaaccggacc
ggtgtaccgcagggcaaacgtcccgtcaccatgtcctgcactgacaagatggcaaagtgg
agcgttgtgggcctccagggggccctcctgtctcacctggtggagccagtttacctgcac
agcctgacggtggggacgctccaccacacgggtcacctgggccgggccatggcacggcgc
ctcgcgcccgtcaagaacctgctgctcccgtaccgacgacagcaactgctgctcggctgt
ctgaacagcagcgaggttcggccgacaggacgggcgccgcatgtcagcgtgaactggacc
cgtggtgacggaggcctggaggagatcagcacctccactggaaggaggaaggactctggg
acgccgtcacggctctgcaagcgctccatgttcgcacgctggctgaggctgcagcagcag
tctcagtttaaagctgcagacaccactccagggacctattctgcttccaagatggctgcc
ggacgataccaaagggcaatgcagcagttcatcagcgctctgcagggtgggggactggga
tcatggctcagaaaacctccagaacttggtcacttcaacgtcagtgtgtga
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