Etheostoma cragini (Arkansas darter): 117954699
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Entry
117954699 CDS
T07493
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117954699
Cell adhesion molecules [BR:
ecra04515
]
Cadherins
Protocadherins
117954699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
117954699
NCBI-ProteinID:
XP_034744544
LinkDB
All DBs
Position
12:7164167..7168460
Genome browser
AA seq
1011 aa
AA seq
DB search
MGETGWNGLLVLAVVSWASLASVTQGKTVKYQTFEEDAPGTVIGNLAKDISSTASSSGGS
RINFRMMKQFNSSFIRLRESDGQLTIGERIDRERTCKHMLHCLIAFDVVSFSKEQFKLIH
VEVEVKDINDNSPEFPRKESSLEISEHTAVGTRIPLDFAVDEDVGANYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDN
SPVFDRNSFSVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGNQVPAEIRQLFRVDRK
TGRLTIESPIDFESKNTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSI
TAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSP
LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGA
YITTVVARDMDMGSNGKVSYKLADTYFMGSPISTFVSLDPASGSLYALRGFNYEMMKQLE
LRITASDGGSPPLSGSTNVYVRIVDQNDNTPVITQPPLNNGSAEVLLPQDAPSGYVITRV
EARDADEGVNAELSYGLATGEPSVFSVNKATGEIYLNQVLSHDVDETLSVTVTVSDNGRP
ALTSTATLHFLIIAGSPPSDRTVYQSGSGDEVHAQWDLSVVIIVVLAGSCTLLLLAIILI
ATTCNRRKRDKSGEDSDSYGEKGTLERGRNHVGDNPLLPLHGAGEGAGFDGHSYSSQPGG
FTSAHPGGSEMCSASEDGSEVPCVYDSDSNSKPRGNKHEGYSTLPGYGNAKEAVRPITIW
KGNSYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDGAVVPPMGGQNALWACT
SECKVLGHSDRCWSPSAVRANAAPSPAPTISSFSSLSKTGSLPRDPHRRDNYYQAHIPKT
VGLQSVYEKVLHREYDYVLVTPPKPVRVPEISDINIPVYTPTPTHCPNNDV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaacagggtggaacgggctgttggtgctagcggtcgtctcttgggcaagcctg
gcttctgtcacacaaggaaagacggtgaaatatcagacattcgaggaagacgcaccaggg
acagtgattggaaacttggccaaggacatctcctccactgcctcttcctcggggggctcc
aggataaatttcaggatgatgaaacagtttaactcctctttcatccggctgagggagagc
gacgggcagctgaccatcggagagaggatagacagggagcggacctgcaaacacatgctg
cactgcctcatcgcttttgacgtggtcagcttctccaaagagcagttcaaactcatccac
gtcgaggtggaggtcaaggacatcaacgacaactcccccgagttcccccggaaagagtcg
agtctggagatctccgagcacacagcggtgggcacgcggataccgctagactttgccgtg
gatgaggatgttggggcgaactacatccaaagctaccagatctccgtcaacagccacttt
tcaatcgacgtgctcagcagggccgacggggttaaatatgcggagctggtgctcatgaag
gagctggatcgggagacgcaggcttcttacgcactggagctggtcgctatggacggtggc
aacccgtcccgcaccggaacaacgcgcatcaacgtcaaggtgaaagactataacgacaac
agcccggtgttcgacaggaacagcttctccgtggacctgcccgaggacgcaccggtgggc
tttctcttgctggacctgaacgcggaggatccagacgaggggctgaacggtgaagtggtg
tacgggttcggtaaccaggtgcccgcagaaataaggcaactgttcagagtggacagaaag
actggacggctcaccatcgagagcccgattgactttgaaagtaagaacacgtacgagttt
gacgttcaggcaaccgacctgggtccgaacccgagcccggccatctgcaaaattgtagtg
caggtgcaggacgtaaacgacaacgcaccggagatctccatcactcctatgacgtccata
acggcggggatagcgtacatcaccgaggcggcggccagagagagtttcgtggctctggtc
agcacctcggacagagactccggcgctaacgggcaggtgcactgcacgctctacggacac
gaccacttcagactgcagcaggcgtacgaggacagcttcatgattgtgagtaccagccca
ttagaccgggagaaaatccccgaatataacctcacagtagtggcggaggatctgggctcc
cctcctttcaggaccatcactcagtacacaatcagactgacagatgagaacgacaacgct
ccggtgttcagtaaaccggtgtatgaagtggccgtggtggagaacaacgcacctggcgcg
tacatcaccactgtagtggcgcgggacatggacatggggtcaaacgggaaggtcagctat
aaactggcagacacatatttcatgggctcccccatttccaccttcgtgtcactggacccc
gcaagcgggtcgctttacgcgctccggggcttcaactatgagatgatgaaacagctggag
ctccgtatcacggccagcgacggcggctccccgcctctgtccggcagcactaacgtctat
gtgaggatagtggaccagaatgataacacaccggtcatcactcagccgcctctcaataac
ggctccgctgaagtcctcctgccccaggacgcaccgagcggctacgtcatcacccgggtg
gaggcgcgggatgcggatgagggcgtgaacgcagagctgtcctacgggctggccaccggt
gaaccctccgttttctctgtaaacaaagccaccggggagatctacctcaaccaggtgctc
agccatgacgtggacgaaactctgagcgtgaccgtgacggtgagcgacaacgggaggccc
gcgctcacctccaccgccacgctccacttcctcatcatcgcgggctccccgccgagcgac
aggacagtgtaccagtcaggcagcggggacgaggtgcacgcgcagtgggacctgtccgtg
gtgattatcgttgtcctcgcggggagctgcacgctcctgctgctcgccatcatcctcatc
gccaccacctgcaatcggcgcaagcgggacaaaagcggagaagacagcgactcgtacggg
gaaaagggcacgctcgagcggggcaggaaccacgtgggggacaacccgcttctgccacta
cacggggccggtgaaggagcgggctttgacggacactcctacagcagccagcccggtggg
ttcacgtcggctcaccccgggggcagtgaaatgtgctcggcctcagaggacggcagcgaa
gtgccctgcgtgtatgactcagacagcaacagcaagcctagagggaataaacatgagggc
tactccactctgcccggctatgggaacgccaaagaggctgtgaggcccatcactatctgg
aaggggaactcttacaccaccatctctgccagggacccggccttcagtggcaaagacagt
ggcaagggagacagtgacttcaatgacagtgacagtgacgtcagtggggacactggcctg
aagaaagatggggcagtggttcctcccatgggtggccaaaatgctctgtgggcttgcacc
agtgaatgtaaggtcctgggtcactcagatcgctgctggagcccctcagcagtaagagcc
aacgcagcaccatctccagcccccaccatctcttctttcagcagcctctccaagacaggc
tccctgccccgggacccccaccgcagggacaactactaccaggcgcacatccccaaaacc
gtgggtctacagagcgtgtacgagaaggtgctgcacagagagtacgactacgttctggtc
accccacccaagcctgtgcgggtgccagagatcagtgatataaacatccctgtgtatacc
cccaccccaacacactgtcccaacaatgacgtctaa
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