Etheostoma cragini (Arkansas darter): 117954724
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Entry
117954724 CDS
T07493
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04148
Efferocytosis
ecra04218
Cellular senescence
ecra04310
Wnt signaling pathway
ecra04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117954724 (nfatc4)
04020 Calcium signaling pathway
117954724 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117954724 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
117954724 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117954724 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117954724 (nfatc4)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117954724 (nfatc4)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
117954724
NCBI-ProteinID:
XP_034744573
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Position
12:complement(20561341..20579397)
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AA seq
891 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPSRQSQRPPPVRTAEPESTVPGEESECAPLHLDSSS
SSLVTDNHHSISTHSPPSSANQRAGMHSPPPRRAPSREFIGTYESLPARSVQVSESRVVE
CPSIQITTISPEDDLAPTISNYWDMGSGGGWDRERLYLPLLDPFTYRDRCPGSLSASPSP
GSSPSSRGWLSPASSCDSLLVEEEELNEATINFGLSPSSRPTSPGGKKRRNSPLVSPCTS
RRGSYSEELQGCNLEGGDSTAQSQAPPSSCELSIPQKTRKTSLEQMSPREVDQEQAPGHS
SPCPLPETQQARREPPSLGMDYLSVPPALAWGRTRASANSPLFRSNALPPLDWPLPSQFD
QYELRIEVQPRPHHRAHYETEGSRGAVKATPTGHPIVKLCGYTERKPLSLQVFVGTADDR
SIRPHPFYQIHRVTGKMVGTSSHESVQAGTKLLDIPLNPENNMTALIDCAGILKLRNSDI
ELRKGETDVGRKNTRVRLVFRTHLHLPPSGAPPGRVLALQVASLAIECSQRSAQELPVIE
SVSLTSCSVEGGEELLLSGSNFLPISRVLFMERGTDGKLQWEEEAHVDRDNSNECLLCVR
VPAYSDLSVSRPMSVSLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSRPSVLPLDGTNVG
PVGGPPRMDRGFHVRGDSIADDQGLGFHLPPYPSTYSPPCPAMSYHEEYCSKADAVVEEP
GGCRAALSERHPSFENLELGFTELLPPLYPRGPQPSSPSPSPWLDSPYLSSSPSPSHSSS
LSPFPAGSPIPTSPYPQYSAFPQEVCPSPPSNPSQYQDICPAPYSHYEGWDPQGRVLGME
HGEERDVKIQECPLEFTSSSMHHITFEEVTEFIGEDIQSYQSGSHMDNQPN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggcgagttcgagttcaagttggtgttt
gaggaggacccgccgtcgcggcagagccagcggccacccccggtgcgcacagccgagccg
gagagcaccgttcccggagaggagagtgagtgcgccccgctgcacctggactcatccagc
agcagcctggttacagataaccaccactcaatcagcacccacagcccaccatcctcggcc
aatcagcgggctgggatgcattccccgccaccacggagggccccctccagagagttcatt
gggacctatgagagcctgccggcacgctctgtacaggtttcagagtctcgtgtggttgag
tgtcctagcatccagataaccaccatctctcctgaagatgacctagcccccaccatttcc
aattactgggacatgggcagcggtggtgggtgggacagagagcgcctctacctccccttg
ttggacccctttacttaccgcgacagatgcccaggctccctcagcgccagccccagcccc
ggctccagcccgtcctcccgcggttggctcagccctgcctccagctgtgactcgctgctg
gtggaggaggaagagctgaacgaggctacaatcaatttcgggctctcgccgtcctcaagg
cccacttcccctggaggcaaaaagcgtagaaactcccccttggtctccccctgtacttca
cgcaggggtagttactcagaagaactgcagggatgcaacctggagggtggagactccaca
gctcagtcccaagctccgcccagcagctgtgagctcagcatcccacagaaaaccaggaag
acttcattagaacagatgtctcccagagaggtggatcaggagcaggctccaggccacagc
tccccctgcccgctgccagagacgcagcaggccaggagagagcccccttcactgggcatg
gactacctctctgtgcccccggctctagcctggggccgaacccgggccagcgccaacagc
cctctgttcaggtctaatgccctgccgccactcgactggccgctgccgtcccagtttgac
cagtacgagctgcggattgaggtgcagccccgcccacaccaccgagctcactatgagaca
gaggggagcagaggagctgtcaaggccacaccaacaggacatcccattgtcaagctgtgt
ggctacacagagaggaagccgctttcccttcaggttttcgttggaacagctgatgaccga
tcaatcaggccccatcctttctatcagatacacagggtgacggggaagatggtgggcact
tccagtcatgagagcgtccaggcggggaccaaactgctggacatccccctcaaccctgag
aacaacatgaccgcactcattgactgtgctgggattctgaagctgaggaactcggacatc
gagctgaggaaaggagaaacagacgttggaaggaagaacacacgtgtccggttggtgttt
cgtacccacctccatctaccaccctctggcgccccgccaggccgagtcctagctctgcag
gttgcctccctggccattgaatgctcccagcgttcggcccaggagctacctgtcatcgag
tccgtcagtctgacctcgtgctctgtggagggaggagaggagcttctgctgagcggctcg
aacttcctgcccatctcaagagtccttttcatggagagagggacagatggtaaactgcag
tgggaggaggaggctcatgttgaccgtgacaacagcaatgagtgtttgttgtgtgtgagg
gtccctgcctacagcgacctgtctgtcagtcggcctatgtcggttagtctttatgtctcc
aacgggaagaggaaaagaagcagcactcactgcttcaagtatctccccgttatgttcaaa
gaggaggacccgctgctgtcccggccctctgtgctgcctctggatgggacgaatgtgggt
cctgtagggggtccacccaggatggacaggggcttccacgtgagaggcgactccattgct
gacgaccaaggactgggcttccacctgcccccttacccctccacctactcccctccctgc
cccgctatgagttaccacgaggagtactgctccaaagccgatgctgtggtggaggagccc
ggcgggtgcagggcagccctgtccgagcgtcaccccagcttcgagaacctggagctgggc
ttcacggagcttcttcctcccttatacccccgtggcccgcaaccttcttccccctcccct
tctccgtggttggactcaccctacctttcctcctcgccctctccctcccactcctcctct
ctcagcccgtttcctgctggcagtcccattcccacctccccttacccccagtactcggct
tttcctcaggaggtgtgtccctcgcctccttccaaccccagccaatatcaggacatctgc
ccagcaccctactcccattacgagggctgggatccccagggaagggtgctggggatggaa
catggggaggagagggatgtcaagatccaggagtgccccctggagtttaccagctcttct
atgcaccacattacatttgaagaagtgactgagttcatcggggaggacatccagtcgtac
cagtcaggctcgcacatggacaaccagccaaactga
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