Etheostoma cragini (Arkansas darter): 117954779
Help
Entry
117954779 CDS
T07493
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04217
Necroptosis
ecra04620
Toll-like receptor signaling pathway
ecra04621
NOD-like receptor signaling pathway
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117954779 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117954779 (ticam1)
04621 NOD-like receptor signaling pathway
117954779 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117954779 (ticam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIF-NTD
TIR_2
Cir_N
Reprolysin
Motif
Other DBs
NCBI-GeneID:
117954779
NCBI-ProteinID:
XP_034744661
LinkDB
All DBs
Position
12:23224111..23226508
Genome browser
AA seq
596 aa
AA seq
DB search
MNQGGQENQGTGLRDVLDILVKVPPQRLLSLTFQLGESPEDNIVHALCLILLQKEERALN
KLQMLKDNSLANHLAEKWQMSGGKFEDFAHNCGHFQEFTGESLAPLARLFKVLSDQRLCD
PPLRNLAYMRALSSDIRKTSKCKDLEYDLLREEAKNVCGPQFEWICSPKDLKSGSYHDPL
SNLGEGNTTLKVAQFQDPSERAHSRPSPLQATSSVPSYPTHLEISIPPTASFQDDKITPE
TSDESKPSEQSQPKSSEPPKFGAKKHSTMDGTLAAEGNKLDSCTSQCESPNQTTKPTAEP
NFALPTAKNLVLPEIPVPNDLHASKDAEEEDEPTFYPFVILHAPEDADVADSMRERLETL
MRVDGEGATFSGDFAEPGKSTLKCVEDAINNSAFTLLLLTCNFNTRMLELETNSALINSI
EKKHKYNTVIPLLPLENCLPKDSIPLVLRTLNPLRENKNLERQLNKFLSPAKVKNQRKIW
TAEQKVKMQMERQETLKNLNQYQKQLIKECSTVQSLEKESLSLLMAQQLLFSHSVPPEQG
GGDGRVRWPLQQQQQQQPNIHIENARYIMIGNDSQMTVDFGGGADKEDSIHREEEQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggggggacaagaaaaccaggggacaggcctgagagacgtcttggacatacta
gttaaggtacctccgcaacggctgctcagcctgacattccagctgggggagtctcccgaa
gataatatcgtacacgccttgtgtctgatccttctccagaaagaggagcgggccttgaac
aaactccagatgctgaaagacaactccctcgctaaccatctagctgagaagtggcagatg
agtggaggcaaatttgaagattttgctcataattgtggtcattttcaagagtttacagga
gaatctttggcaccgctggctcgtcttttcaaggtattgtcagaccagaggctgtgtgat
ccacctctgagaaatctggcgtatatgagagccctttccagtgacattcgtaaaacgagc
aaatgcaaagatctagagtatgatctgctcagagaggaagctaaaaatgtgtgcgggcct
cagtttgagtggatttgctccccaaaggatctcaagtcagggtcttaccatgatcctctt
agcaacttgggtgaaggaaacacaactttaaaagtggcccagttccaggatccgtcagag
agagctcacagtcggcccagcccactgcaggcgacctcttcagtgccctcatatcccact
catctagagataagtatacctccgacagcctcatttcaagacgacaaaataactccagaa
acgtcagatgaatccaaaccatccgagcaatctcagcctaaatccagtgaacctcctaag
tttggagcaaagaaacactcaacgatggatggcacattagcggcagaaggcaataagttg
gacagttgcaccagtcaatgtgagagtccaaaccaaaccactaaaccaaccgctgagcca
aactttgcactacctactgctaaaaaccttgtcctacccgagatcccggttccaaatgat
ctgcatgcaagtaaagatgcagaagaggaggatgagccaacattttatccatttgtaatc
ttgcacgcaccggaggatgcagatgtggctgacagcatgagagaaagactggaaacattg
atgcgggtcgacggggaaggggcaaccttttcaggggactttgccgagcccggaaagagc
actctgaagtgcgtagaggacgccatcaacaactcggccttcactcttctgctgcttacc
tgcaactttaacactcgcatgctggagttggagacaaactctgcccttatcaactccatt
gagaagaaacacaagtacaacacggtcatccctctgctgcccctggagaactgcttgccc
aaagacagcatccctttggttttgcggacattaaatccactcagggagaacaaaaacctt
gaaaggcaattaaataagtttttgtcgcccgcgaaggttaaaaaccagagaaaaatctgg
acagcagagcagaaagtaaaaatgcagatggagagacaggagaccctaaagaatttaaac
cagtaccagaagcagttgatcaaagagtgtagcacagtacagtcgctggagaaagagagc
ctgagccttttaatggcccaacaacttcttttcagccacagcgttccaccagaacagggt
gggggtgacggcagggtccggtggccactgcaacaacaacaacaacaacaaccgaatatt
cacattgaaaatgctaggtacattatgattggtaatgactctcaaatgactgtggatttt
ggtggaggtgcagacaaagaggattccattcacagagaggaggagcaataa
DBGET
integrated database retrieval system
