Etheostoma cragini (Arkansas darter): 117954840
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Entry
117954840 CDS
T07493
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117954840 (astn1)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117954840 (astn1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
MACPF
fn3
Pur_ac_phosph_N
NDNF
Motif
Other DBs
NCBI-GeneID:
117954840
NCBI-ProteinID:
XP_034744756
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All DBs
Position
12:4762820..5093422
Genome browser
AA seq
1319 aa
AA seq
DB search
MASINMGLRPLLLLGLACVFLVVLMPYVQCLNGDEDQSQDTECKMKSVTVSALPFLREND
LNIMHSPSASEPKLLFSVRNDFPGDVVVVDDLENTELPFFVLEISGNSEDIPLVRWKQQW
LENGTLLFHIHHQDGSMNPPEPTEDPANDSAKEELRILHISVMGGMIALLLSILCLVLIL
YTRRRWCKRRRIPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGPNSSGTLSIR
ETPILDGYEYDITDLRHHLQRECMNGGEEFASQVTRTLDSLQGCNDKNNMDLTPVSDNTK
LALMNKYKDNIIATSPIDSNHQQNTLLPHNTSTSQRKRLSSNTRAGSTFLNPDGDSGTEA
DSEPQLAFYTDPNRSRRRSRGMRNGNANSAWGSGAAGSPRSPINKTTLTLISVISCVIGL
VYSSHLSCTLAVRVILHVPEHLIADGSRYILLQGSQLDASDWLNPAQILLYYQQNASGPW
VNELCGRRLLDPCEHQCDPETGECLCLDGYMKDPVHKHLCIRSEWGPNQGPWPYTIFQRG
FDLVMGEQPSDRIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVTEDAVDI
REKLMISSSFDSLEVLLDSFGPVRDCTKDNGGCSRNFRCISDRKLDSTGCVCPLGLSPMK
DGTGCYDHHIGIDCSDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKRGPDGRS
CLPLSETCTEGIDCGEAVDIPANQTVFGDLFYGYNNHTKESTTGQILKATFRQKNFARGI
EQQLPDGMVVASVPMEVQCHEELSDPVPDPEYLTGMVNYSEVSGYPLVQHWSLRSVQYHV
KLNQWVLSQAFSSAIHSLDGATQRSDFVSILREFGNHYVQEAVYGFQESCTIWYPNKQVQ
RQLWLEYQDISKGNSPSEESEERDKEPRTLTYPAYIASLLDTGAKRMAAGVRMDCNSQGQ
CPRSCHLCHMSPRVVQGRQQSEPVLLQITKAAPIFELVSNNETYQALHEAMMSMLWCSGK
GDVIDDWCRCDSSAFGTDGLPTCAPLPQPMLKLSYTYEPSSSLVIMEWNHTEPPIGVRIV
DYLISQEKVTERTDHSKVETETLLSFVDDILSGARSPCVMLGDIPNLLSSSISMIIRCLE
PDTTYMFRLWAVDNTGRRSSPSEVTIKTPCPTVDDVKAQEIADKIYNLFNGYTSGKEQQT
AYNTLMDLGAPTLRRVLYHYNQRYESFGEFTWRCEDELGPRKASLILSQLDELSPWCKGL
LQEPKIGLRRMSLKFLSCRYTDTKAFGLNWSDMGQDVHKACDEQTLTVMYNDYGEPKEL
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatcaacatggggctgagaccgctgctgctgctggggctcgcgtgcgtcttc
ctggtcgtcctaatgccttatgtccaatgccttaatggcgacgaggaccagagccaggac
accgagtgtaagatgaagagcgtaaccgtgtcggcattgccgtttttgagggaaaacgac
ctaaacatcatgcacagtccgtcggcctccgagcccaagctgctgttttccgttcgaaac
gattttcccggagacgtcgtggtggtggacgacctggaaaacaccgagctcccttttttc
gtcttagagatctccgggaattcagaggacatccctctggtgcgctggaagcagcagtgg
ctggagaatggcactctgctcttccacatccaccaccaggacggcagcatgaaccccccg
gagccgaccgaagacccggccaacgattcggcgaaggaggagctccgcatcctgcacatc
tctgtcatgggcgggatgatcgcccttctgctgtctatcctgtgcttggtcctgatcctc
tacacccgcaggcgctggtgtaaacgccgtcgcatccctcagccccagaagagcgccagc
gccgaggcggctaatgagatccactacatcccctccgtgctgatgggaggccaggcccgg
gagagcttgaggaactctcggggtcaagggccaaactccagcggtaccctcagcatccgg
gagacaccgattttggatgggtatgagtacgacataacagacctgcgtcaccatctgcag
cgggagtgtatgaacggtggcgaggagtttgccagccaagtcacccgtaccctggactcc
ctccagggctgtaatgacaagaataatatggacctcacacctgtgagtgacaacaccaag
ctggccctaatgaacaaatacaaggacaacatcattgccacaagtccaatcgacagcaac
caccagcagaacaccctgcttccacacaacacctccaccagccaacgcaaacgtctctcc
agcaacacccgtgcgggttcaactttcttgaacccagacggggactctggaacggaggca
gacagcgagcctcagctggccttttacaccgacccaaaccgcagtcgccgccggagtcga
ggtatgagaaatggtaacgccaacagcgcgtggggctcaggggcagcaggttccccccgc
agccccatcaataagaccaccctgactctgatcagtgtcatcagctgcgtgattggcctg
gtttactcctctcacctgtcttgcaccctcgctgtccgggtaatcctacatgtgccggag
cacctcattgctgacggatcaaggtatattttgctgcaggggagccaattggacgcctca
gactggctaaacccagcccagatcttgttgtactaccagcagaacgccagcgggccgtgg
gtcaacgagctgtgtggacgacgcctcctggatccttgtgagcaccagtgtgatccggaa
acaggagaatgcctttgcctcgacggctacatgaaagacccggtccacaagcacctctgc
atccgcagtgagtgggggcccaatcagggtccctggccttacaccatatttcagcgcggt
tttgatcttgtgatgggagaacagccctctgatcgcattttcagattcacatacacctta
ggggaagggatgtggctgccgctgagtaaaagctttgtcatcccacctgccgagctcgcc
atcaacccatcagccaagtgcaagacggacatgacagttacagaggacgcggtggacata
cgagagaaattgatgatcagttcatcttttgactcgttggaggttctcctggactcattt
gggcccgtcagagactgcaccaaagacaacggaggctgtagccgcaacttccgctgcata
tctgaccgaaaactggactccactggatgtgtgtgccctctggggttgagtcctatgaag
gatgggactgggtgctacgaccaccacatcggcatcgactgttccgacggtttcaatgga
ggatgtgagcagctgtgtctccagcagctggcgcctctagaggatgacccgacactctac
aacatccagatgttctgtgggtgcatcgaggactacaagcgcggcccagatgggaggtca
tgcctgccgctgtcggagacctgcaccgagggaatagactgcggggaagcagtggacatc
cccgctaaccagactgtgttcggagaccttttctatggatacaacaaccacaccaaagag
agcaccaccggacagatcctcaaggccacattcaggcagaagaactttgcccgaggcatc
gagcagcagctcccagatggcatggtggtggcatcagtgccgatggaggtccagtgccac
gaggagctgtccgaccctgttccggacccagagtacctcacaggtatggtgaactacagc
gaggtgtctggctacccccttgttcagcactggagtcttcgttctgtgcagtaccacgtc
aaactcaatcagtgggtcctctctcaagcctttagctcggccattcattctctggacggg
gccacgcagcggagcgactttgtctccatcctcagggagtttgggaaccattatgtgcag
gaggcagtgtacggcttccaggagtcctgtaccatctggtaccccaacaaacaggtccag
agacaactgtggctggagtaccaggacatcagcaaaggtaactcgccttcggaggagtca
gaggagcgtgacaaggagccaaggacgctgacctaccctgcatacattgccagcctgctg
gacacaggtgccaagcgcatggctgctggtgtccgtatggactgcaacagccaaggccag
tgcccgcgctcctgtcacctctgccacatgagcccaagggtggtgcaagggcggcagcag
tccgagcctgttctgctgcagatcaccaaagctgcgcccatctttgagctggtgtctaac
aatgagacctaccaggctcttcatgaggcgatgatgagcatgctatggtgttcagggaaa
ggagatgtcatcgatgactggtgtcggtgtgattccagcgcttttggcacagacggactg
cccacctgtgccccacttccccaacctatgctgaaactgtcttacacctacgagcccagc
agctcattggtcatcatggagtggaaccacaccgagccaccaatcggcgtgcggattgtt
gattaccttattagccaggagaaggtgaccgagaggaccgaccactccaaagttgagaca
gaaacacttttgagctttgtggatgacatcctgtctggggccaggtcgccatgtgtgatg
ttaggggacatccccaacctcctgtcctcctccatcagcatgatcattcgctgcctggag
cctgacaccacatacatgttccggctgtgggcagtagacaacacagggcgccgttctagt
ccaagtgaagtcactattaaaactccgtgtccaactgtggatgatgtcaaagcacaagaa
attgcagataagatctataaccttttcaacggttacaccagtgggaaggagcagcagaca
gcctacaacactctaatggatctgggcgctccgacccttcgccgcgtgctctaccactac
aaccagcgctacgagagcttcggggaattcacctggaggtgtgaggacgagctgggaccc
aggaaggccagcctcatcctgtcccagctagatgaactctccccgtggtgtaagggtctt
ctgcaggagccgaagattggcctccgcaggatgtcccttaagttcctgtcctgccgttac
actgacaccaaggcctttgggctgaactggtcagacatgggccaggacgtgcacaaggcc
tgtgacgagcagacgctcacagtcatgtataatgactacggcgagcccaaggagctgtga
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