KEGG   Etheostoma cragini (Arkansas darter): 117954851
Entry
117954851         CDS       T07493                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117954851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecra03400]
    117954851
DNA repair and recombination proteins [BR:ecra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     117954851
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 WDR54 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 117954851
NCBI-ProteinID: XP_034744769
LinkDB
Position
12:complement(6917843..6925261)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLSMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSTNDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcttatgtc
attagagatgaggtggagaagtacaaccgaaatggggtgaatgcactccagctggaccct
gcgctgaaccggctgttcactgctggaagggactctatcatccggatatggagtgtctac
cagcataaacaggacccatacattgcctcgatggagcatcatacagactgggttaatgac
atagttctctgttgcaatggcaaaacattgatatccgcctcatcagataccacagtcaaa
gtatggaatgcgcataaaggcttctgtatgtcaacgttacgaacccacaaggactatgtg
aaagctctggcctacgctaaggacaaggagcttgtggcatcagcaggtctggatcggcag
atctttctttgggacgtgaacacactaacagcactcactgcttctaacaacactgtcacc
acctcatctctcagtgggaacaaggactctatctacagtctgtctatgaaccagatgggc
acagtcattgtatctggatccacagaaaaggttctgagggtttgggatcctcgaacatgt
gcaaaactgatgaagctaaaaggccacacagacaacgtcaagtcgttgctgctgaatcga
gatgggactcaatgcctgtcgggcagctcagacggcaccatccgcctatggtcactcggc
cagcagaggtgcattgccacctaccgggtgcacgatgaaggggtctgggccctgcaggtc
aatgaggcctttacacacgtctactctggaggaagagacaaaaagatctactgcactgac
ctgcgtaacccggacatccgtgtgctcatctgtgaggaaaaggctccagtgctcaaaatg
gaactggacagatctgctgacccacctccagcaatctgggtctccaccaccaagtcatcc
gttaataaatggtctctaaagggaatgcacaacttccggtcatcaggggagtacgataat
gactgcactacccctctgacaccactgtgcactcaaccagaacaagtgatcaagggaggg
gccagtatcatacagtgccacattctgaatgacaagagacacatactcaccaaagatacc
aacaacaatgtggctttctgggatgtcttgaaggcttgcaagggtgaagacttggggaaa
gtggagtttgatgaggagattaaaaagcgcttcaaaatggtctacgtaccaaactggttc
tctgttgatctgaaaactgggatgctcactatcacattagatgagagcgactgcttcgcg
gcctgggtgtctgcaaaggacgctgggttttcaagctctgatgggtccgacccaaagttg
aacctgggtggactgctgcttcaggctctgttggagttctggccccgaactcgcatcaac
cccatggacgaggaagagaacgaggtgaaccacgtgaatggagagcaggagaacagggtc
cagaaaggaaatggatatttccaagtgccaccacacacgccagtcatctttggggaagca
ggaggcagaaccctatttaggttgctatgcagggactcaggtggagagactgaatcgatg
ctgctgaacgagactgttccacagtgggttattgatataactgtagataaaaatatgccc
aagttcaacaaaatcccattctacctccagccccattcttcctctggtgcaaaaactcta
aagaaggaccgtctctcagccagtgacatgctccaggtgaggaaggtgatggagcatgtt
tacgagaagatcatcaacctggacaatgagtcgcaaaccaccagctcctcgaccaacgat
aagccgggggagcaggagaaggaggaggacatggcaatgctagccgaggagaagatcgaa
ctaatgtgtcaagaccaggtgctagatccaaacatggacctgcgaacagttaaacacttt
atctggaagagcggaggggacttgacgcttcactataggcagaagtccacgtga

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