Etheostoma cragini (Arkansas darter): 117954877
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Entry
117954877 CDS
T07493
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117954877
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117954877
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117954877
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117954877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_2
ig
DSPc
V-set
Tissue_fac
PTPlike_phytase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
117954877
NCBI-ProteinID:
XP_034744842
LinkDB
All DBs
Position
12:complement(24166833..24225588)
Genome browser
AA seq
1985 aa
AA seq
DB search
MPLSRTGGVQAQSRRPILGLRLSPSALHLLLPLIILLTNPLSILCGELAPPKFNKIPTDQ
IGVSGGVASFVCQATGNPKPVVYWNKKGKKVNSQRIEVTVEFDEGAGAVLRIQPLRAPRD
ENIYECVARNSEGEVSVTAKLAIIREDLLPLGFPSIDMGPQLKVVERTKTATMLCAASGI
PDPEISWFKDFLPVEPFNSQGRIKQLRSGALQIENSEETDQGKYECVATNSRGVRYSSPA
NLYVRELREVATDTLRRVPPRFSILPSNHEIMPGGSINITCVAVGSPMPYVKWMLGSEDL
TPEDEMPIGRNVLELNGVRESANYTCVAMSSLGILEATAQVLVKTLPKPPGTPIVTETTA
TSVTITWDSGNPDPVSYYIIQYRAKGPDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAF
NSIGQGPPSTRVEARTGEQAPASPPRNVQAHIISPNTVMVRWEEPEEPNGQVKGYRVYYT
MDPSRMMSEWQIHNVQDSLITTIQNLVTSETYTIQVLAFTSVGDGPFSDPVHVKVMPGVP
GQPGKFKVGKVADTSIELTWEPAYTKEGIVNYELLYKPVKFGSLEKLTFGPRNSYTVEGL
KANTEYSFSLAAISNKGIGAFTNELVQRTSQAKPSAAPEGVSCESASSTSLRVSWRPPPL
EGQNGELAGYMLRYQRVSGAGGGGQGQGVKGLPVPALQGQTVLAGLEKWSWYNVTVAAFT
AEGTGPKSPAVICRTDEDVPGAAPRQVDVQPLNASALRVSWRSVLPRLRQGQVRGYQVHF
SRSESGESRTLPQIKDILLDESQMEEDDSTQYELILGGLKSETLYSISVAAYTTKGDGAH
SKTKLVQTLGIVPGPPSLWVRPGSGPTVVVRWAPPVECSESSSDSRGAPVVIQGYRLQFG
LKNTSLDNTVDFTNKEKNFTVRNLSPGSTYVFVLSAKSRAGYGDVVQHEITVPVFPPVGY
PKIPDFVNATCCSLHFSWLPPAPEECNGVITEYTILYKEAAGLKPFADPVPAAIPAPTAP
PWLITLPASESSYTILGLNHSTAYEVQLRAHNKAGPGPFSPPLVSRTLAFETDVPRNFSV
NLATKTSVLLTWEFPESSNPYRFTVEYNRQKMEVDARLRKAVIPNLQPDTSYDFKITAPE
GNMGGLRHRISAKTSPPITIRRPEIDHTRDTETTVTIILPSLETRTPVKNVYVVVVPLKR
ARGVIRHLKSPDEMDLEELLKDISQKQRDSRQQKQVDLRRAYITARFTPATLPAFFTLGD
QLDYGGFENRALEPGQEYVFFILAELNSTTGKMYVASPYTDPVIAPDSDPQPLDAGDGLI
WVVGPVLAVVFIICIVIAILLYKNSKPDSKRKDSEPGTKSLLNNAEMMAHHPTDPVEMRR
INFQTPGMMSHPPIPISELAEHIELLKANDNLRLSQEYESIDPSQQFTWEHSNLEVNKPK
NRYANVIAYDHTRVILAPIEGILGSDYLNANYIDGYRKQNAYIATQGPLAETFGDFWRMV
WEQRAASVVMMTRLEEKSRIKCDQYWPSRGTETYGMIQVTLLDTMELATFCVRTLSLHKS
GCSERREVRQFQFTAWPDHGVPEYPTPFLNFLRRVKACNPPDAGPIIAHCSAGVGRTGCF
IVIDAMLERIRHERTVDIYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVACGNTEVAAR
SLYSYMQKLSKVEPGEHITGMELEFKIGNQYSGLGTLANQRLANTKAHTSRFVTANLPCN
KFKNRLVNIMPYETTRVCLQPIRGLEGSDYINASYIDGYRQQKGYIATQGPLAETTEDFW
RMLWEHNSTIVVMLTKLREMGRVGEKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREF
KVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAG
VGRTGVFITLSIVLERMRYEGAVDIFQTVKMLRTQRPAMVQTEDEYQFCYQAALEYLGSF
DHYAT
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtccaggacaggtggagttcaagcccagtccaggaggcctatcctggggctc
cgccttagcccctctgccctgcatctgctgctgcctttgattatcctgttaaccaaccct
cttagcatcttgtgtggagaactagctcccccaaagttcaacaagattcccacagaccag
atcggagtgtcagggggtgtggcatcatttgtgtgccaggccactggcaatcccaagcct
gtcgtttactggaacaagaagggcaagaaggtcaactcccagcgtatcgaggtgaccgta
gagttcgatgagggtgcaggtgctgtgctgaggatccaaccgctcagagcgccccgagat
gagaacatctacgaatgtgtggcacgcaacagtgaaggagaggtatccgtcactgcaaag
ctggccattatcagagaggacctgttgccacttggcttccccagtatagacatgggaccc
cagctgaaggtggtggagcggacaaagacggcgaccatgctgtgcgctgccagcggcatc
cctgacccggagatctcctggttcaaagactttctgcccgtcgagcccttcaacagccag
ggtcgcatcaaacagctccgatcaggagcattacagatcgagaacagcgaggaaacggac
caagggaagtacgagtgtgtggccaccaactctcgaggcgtacgctactcctcccctgcc
aacctgtatgtgcgagagcttcgagaagtggcgacagacacattgcgccgtgtgccccct
cgtttctccatcctcccctccaaccatgagattatgccgggagggagcatcaacatcacc
tgcgtggccgtgggttcgcccatgccctacgtcaagtggatgctgggcagcgaggatctg
accccagaggatgaaatgccgattggacggaacgtgctggagctcaacggggtccgggag
tcagcaaactacacctgtgtggccatgagcagcctgggtatcctcgaggccaccgctcag
gtcttagtaaagactttgccaaagcctcccggcacacccatagtcacagagaccaccgcc
accagtgtaaccatcacatgggactcaggcaacccagacccggtctcctactacatcatc
cagtaccgggccaaagggccggacagcaagtacgagacagtggacagcatcaccaccacc
cgctacagcatcgggggactgtaccccaacactgaatatgaaatcagagtgtcagccttc
aatagcatcggccagggccccccctctacacgtgtggaggctcgtacaggagagcaggcc
ccagccagtcctccccgaaacgtccaggcccatattatatctccgaacacagtgatggtc
cgctgggaggagccagaggaacccaatggacaggtgaaaggatatcgcgtgtactatacc
atggacccgtcccgaatgatgagtgagtggcagatccataacgtccaggacagcttgatc
accaccattcagaacctggtgacctcagagacctacaccatccaggtcctggccttcacc
tcagtaggggacggacccttctcagaccccgtccatgtcaaagtcatgcctggagtccca
ggccaaccggggaagtttaaagtcggtaaggtggcagacaccagcattgagctgacctgg
gaacctgcttacacaaaggagggcattgtcaactatgagctgctctacaaacctgtaaag
ttcggcagcttggagaagctgacctttgggccgaggaactcatacacggtggagggtctg
aaagccaacactgagtactccttctccctggccgccatctcaaacaaaggcatcggagcg
ttcaccaacgagctggtgcagaggacatcacaagccaagccttcagctgcacccgagggt
gtgtcctgcgagagtgccagctccacctcgctgagagtaagttggcggccacctccactg
gagggtcagaatggcgagttggcaggttatatgctgagataccagagagtctctggagca
ggaggcggaggtcagggccagggtgtcaaggggcttcctgtcccggccttgcaggggcag
acagtgttagcggggctggagaagtggagctggtacaacgttaccgtggcagccttcact
gcagaggggactggacccaaaagcccggctgtgatctgcagaactgatgaggacgttccc
ggtgcagcacctcgtcaggtggatgtccagccgctcaacgcctcagcgcttcgagtctca
tggcggtcggtgttgccacggttacggcaaggccaggtccgtggctaccaggttcatttc
agccgctcagagagcggtgaatcacgaacccttccccaaatcaaagacatcctattggat
gagtctcagatggaggaggatgactcgactcaatatgagctgattttaggaggcctgaaa
tctgagactttgtactccatctcagtggcagcatacactaccaaaggggatggagcacac
agcaaaaccaagctggtgcagaccctggggattgtgcccggccccccctctctgtgggtg
cgtccaggatctggtccaacagtggtggtgcgctgggctcctccggtggagtgctctgag
tcatcctctgatagccggggggccccagtggtaatccagggctaccgtctacagtttggc
ctgaagaacacctctttagacaacacagtggattttacaaataaggagaaaaacttcact
gtcagaaacctctccccagggtccacctacgtctttgtcctgtctgcaaagagccgagca
ggttacggagatgtagtgcagcacgagataacagttcccgtattccccccagtgggatac
cccaaaatacctgactttgttaatgccacttgctgctccctccacttctcctggctgcct
cctgccccagaggagtgcaatggtgtcatcacagagtacaccatattgtacaaagaggct
gcaggcctcaaaccctttgctgaccctgtcccggcagccataccagcccccactgctccc
ccatggcttatcacgctaccagcgagtgagtccagctacaccatcctgggcctcaatcac
agcacagcctacgaggtgcagctcagagctcacaacaaggcagggccaggccctttcagc
ccacctctggtgagccgaaccctggcctttgaaacagatgtgccgaggaatttttcagtc
aatctggccacgaagaccagtgttcttctgacttgggagtttccagagagcagcaacccc
tatcgttttactgtggagtataaccgacagaaaatggaggtggacgctcgtctgagaaag
gcagtcattccaaatcttcagcctgacaccagttacgactttaagatcactgctccggag
ggcaacatgggaggccttcgccaccgcatctccgccaagacctcgccgccaatcaccatc
cgccgccccgagatcgaccacacccgcgacactgaaacgaccgtcaccataatcctgccc
tcgctggagactcgcactcctgtcaagaatgtgtatgttgttgtggtgccgctgaagaga
gcccgcggtgtcatcagacacctcaagagcccggatgaaatggacctagaggagttatta
aaagacatcagtcaaaagcagagggattctcggcagcagaagcaggtggacctgcggcgg
gcttacatcacggcccgtttcacacctgccaccctaccggccttcttcaccctgggggat
cagctggactatggaggctttgagaaccgagctctagagccggggcaggagtatgtcttc
ttcatcttggctgagctcaactccacaaccgggaaaatgtatgtggccagcccctacaca
gaccccgtgattgccccagattcagacccccagcccctggacgctggtgatggtctgatc
tgggtggttggacccgtcctggctgtggtcttcatcatctgcattgtcatcgctatcctc
ctttacaagaacagcaaacctgacagcaagcgcaaggactctgaacccggaaccaagagc
cttttgaacaacgccgagatgatggcccatcacccaacagaccctgtggagatgagacgc
atcaacttccagactcccggaatgatgagccatcctcccatccccatcagcgagctggct
gagcacatagagctgctgaaggcaaacgacaacctgcgactctcccaggagtacgagtcc
atcgatcctagtcagcaattcacctgggagcactctaacctggaggtcaacaagcccaaa
aaccgctacgctaacgtcatagcgtacgaccacaccagagtcatcctggctcccatagaa
ggtatcctggggagcgactatctcaacgctaactacattgacggctacaggaagcagaat
gcctacattgctacccaggggccactggcggagacattcggggacttttggaggatggtg
tgggagcagagggccgcctctgtggtcatgatgacgcgtcttgaggagaagtcacggata
aagtgtgaccagtactggccaagtcgcggcacagagacatacgggatgatccaggtcacc
ctgctggacacaatggagctggccacattctgtgtccgcaccctttccctgcacaagagt
ggctgcagtgaacggcgagaggtgcgtcagttccagtttacagcctggccagatcacggt
gtgccagagtatcccacccccttcctcaacttcctccgcagggtcaaagcctgcaaccct
ccggacgccggacctatcatcgctcactgcagtgctggtgttggtcgcaccggctgtttt
attgtcatcgatgccatgctggagcgcattcgacacgaacgcactgtggacatctacggc
catgtgaccctaatgcgctcccagaggaactacatggtgcagacggaggaccaatacagc
ttcatccacgaggccctgctggaggccgtggcctgcgggaacactgaggtggccgccagg
agtctgtactcttacatgcagaagctgtccaaggtggagcctggggagcacatcaccggc
atggagctggagttcaagattgggaaccagtacagtggccttgggacattagctaaccag
cggctggccaacaccaaagcccacacgtcccggtttgtcacagccaacctgccttgcaac
aaattcaagaaccgcctggtcaacatcatgccctatgaaaccacccgcgtctgcctccag
ccaatcagaggcctggagggctccgactatatcaacgccagttacatagacggatacagg
caacagaaaggctatattgccacccagggtccactggctgagaccacggaggatttctgg
aggatgctgtgggaacacaactccactatagtggtcatgctcactaaactgagagaaatg
ggacgggtaggggagaagtgtcaccagtactggcccgctgagcgctcggccaggtaccaa
tactttgtggtggaccccatggctgagtacaacatgcctcagtacatcctccgggagttc
aaagttacagatgccagggacggccaatcacggacagtgcgtcagttccagttcaccgat
tggccggagcaaggtgttcccaaatcgggcgagggcttcattgatttcattggccaagtg
cacaaaaccaaggagcagtttggccaggatggaccaatcagcgttcactgcagtgctggc
gtggggcggacaggtgtcttcatcactctgagtattgtcctggagaggatgcgttacgaa
ggggcagtggacatcttccagactgtcaaaatgctgcgcacacagagacccgccatggtg
cagactgaggatgagtaccagttttgctaccaggctgctctggagtacctgggtagcttt
gaccactatgcaacataa
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