Etheostoma cragini (Arkansas darter): 117954982
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Entry
117954982 CDS
T07493
Symbol
stag2a
Name
(RefSeq) cohesin subunit SA-2a isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117954982 (stag2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117954982 (stag2a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117954982 (stag2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
117954982
NCBI-ProteinID:
XP_034744943
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Position
13:10354984..10374801
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AA seq
1278 aa
AA seq
DB search
MIAAQDLHTEFQFPPEAESQLSSDTDFDDPDGKNAKTGKGMAAKKGKKALGDKAKGGAGG
AGRTPGLGRVNGHHQENGLENMTLFEVVKLGKSATQSVVDDWIEAYKHDRDIALLDLINF
FIQCSGCKGAVSPEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMSGPQWKKFRISFCDFIA
ILVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
MDNTQRQYEAERNKVVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDA
IADIRAVCIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLFYSREL
GARLELFTSRFKDRIVSMTLDKEYDVAVQAVKLLTLVLQSSDEVLTAEDCESIYHLVYSA
HRPIAVSAGEFLFKKLFSHRDPEEEGLPRRGRQSLNGSLIKTTVFFFLESELHEHGAYLV
DSLWDCASELLKDWETMISLLLDEPMSGEEALTDRQETALVEIMLCAIRQACECHPPVGR
GTGKRVLSAKEKKTQLDDRTRITEMFAVALPLLLAKYCVDIDKVTNLLQIPKYFDLDIYT
TGRLEKHLDALLRQIWEVQDKHTDTEVLEACSTTYHALCNEEFTIFNRVDIARSQLFDEL
VDKFNRLLEDFLQEGEEPDEDDAYQVLSTLKKISAFHNAHDLSKWDLFTSNYRLLNTGLQ
NGDMPEQIVIHAMQCTHYIILWHLAKVSDGSSLKGDMLTLRKQMRAFCLMCQRYLNSINN
AVKEQAFTILCDLLMIFSHQIMSSGREQLESLVYTPDSSLQADLLNFILDQVFIDQDDDN
NSTDGQQDEEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIK
ETLSKTRQIDKVQCAKTLVLSLQALFNEMLSELGCNVDRSTSAFCGIKELARRFSLTFGL
DQLKTREAIAMLHKDGIEFAFKEPSPQGQGSPPLNLAFLDILSEFSSKLIRQDRRSVHMY
LERFMTVQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGISSRGSTRSKKSKPATSSK
RKLPEAEENSCSSTDAVWMNREQNVQTPVMMHSPHLTSTVLRDPKKMRPEDSYTTAFTMP
TEQNSHQHVPPQQQPHHHHQTAIDYNTQVTWMLTQRQQAEARQQQDRVSMHYAKMRNHMQ
QAIRRGSGLMEDDEEPIVEDVMMSSEDRLEDINEGMDFDTIDIDLPASKNRRERTELKPD
YFDPSSIMDDSVLNVSMF
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcgcaggatttgcacacagagtttcaatttcctccagaggcagaatctcag
ttgtcttcagatactgactttgatgatcctgatggcaaaaatgcaaagacaggaaagggc
atggcagccaagaaggggaagaaggcacttggagacaaggccaaaggtggggcaggtgga
gcagggaggacccctggtcttggcagggtgaatggccatcatcaggagaacgggctagag
aatatgaccctgttcgaggtcgttaaattggggaagagtgccacacagtcggttgttgat
gactggatcgaggcatataaacatgacagggacattgctcttttggacttgatcaacttc
ttcattcagtgctctggctgtaaaggggctgtgagtccagagatgttcagacatatgcag
aactccgaaatcatccgaaaaatgacagaggagtttgatgaggacagcggtgactatccg
ttaactatgtcaggaccacagtggaagaagttcagaataagcttctgtgacttcatagcg
attctggtgcgtcagtgtcagtacagcattatctatgatgagtatatgatggacacagtc
atctcactgctcaccggcctgtctgactcacaggtcagggcgttcagacatacaagcaca
ctagcagccatgaagttgatgacagccctggtgaatgtcgctctcaacctgagcatcaat
atggacaacacgcagagacagtatgaggcggagaggaacaaggttgttgcaaaaagggca
aatgataggttggagctcctgttacagaagcgtaaagagcttcaagaaaatcaagatgaa
attgaaaacatgatgaatgcaattttcaaaggagtgtttgttcacagatatcgtgatgcc
attgctgatatccgagctgtttgtattgaagagattggagtgtggatgaagctgtacagt
gacgccttcctcaatgacagctacttgaagtatgttggctggacaatgcatgacaagcaa
ggtgaggtgcggctaaagtgcctgactgccctacaaggtctgttctacagcagagagctc
ggcgcacgactggagctcttcacaagtcgcttcaaggaccgcattgtttctatgactctg
gacaaggaatatgatgttgcagtgcaagccgttaaactcctgacacttgtcttgcagagt
agtgatgaggttctgacagcagaggactgcgagagcatatatcatctggtttactcagca
catcgacccatcgcagtttcagcaggagaatttctctttaagaagctcttcagccatcga
gatcctgaggaggagggattacccaggaggggcaggcagagcctcaatggcagccttatc
aagactactgtcttcttcttcttggagagtgagctccatgaacacggggcctacttggtg
gacagcttgtgggattgtgcgtcagagctgctgaaagactgggagactatgatcagcctg
ctgctggatgagcccatgtcaggagaggaagccctgactgatcgccaggagacggctctg
gttgagatcatgctctgtgccattcggcaggcttgtgaatgccaccctccagtaggcaga
ggcacagggaagagagtcctgtctgcaaaggaaaagaaaacacagctggatgatcggacc
cggatcacagagatgtttgcagttgcgttgcctctgttattggcaaagtactgcgttgat
attgataaggtgacaaatttgctacaaataccaaagtactttgatcttgacatctacaca
actggccggttagaaaagcatttggatgccttgttgcggcaaatctgggaggtccaggat
aagcacacagacactgaggtgctggaggcctgctccaccacctaccatgctctgtgcaac
gaagagttcaccatcttcaaccgcgtggacattgctcgctcccagctttttgatgagctt
gtagacaagttcaatagacttctggaagatttcctgcaagagggtgaagaaccagatgag
gatgatgcctaccaagttctatccacactcaagaaaatcagcgctttccacaatgcacat
gacctctctaagtgggatctcttcaccagcaactacaggttactcaacacaggcctacag
aatggggatatgcctgaacagattgtgattcatgcgatgcagtgcactcattacatcatc
ctgtggcatctagcaaaggtttcagacggcagttcattgaagggggatatgttgaccttg
agaaagcaaatgagagctttctgcttgatgtgtcagcgttacctaaacagcatcaacaac
gcagttaaagaacaggccttcaccatactatgtgatctgctaatgatcttcagtcaccaa
attatgtcttcaggccgggaacaactggagtctctggtctatacgccagactcctctttg
caggcagatctgctcaacttcattctggatcaagtgttcattgaccaggatgatgacaac
aacagcacagacggacagcaagatgaagaagccagtaaaattgaggctctgcataagcga
agaaaccttctagctgcctattgcaaattaatcatttacaatgtggtggaaatgaacacc
ggagcggatatatttaaacagtatatgaggtattacaatgactatggagatatcatcaag
gaaacattgagtaaaacaaggcaaattgacaaagtacaatgtgcaaagacacttgtattg
agcctgcaagcgttattcaatgagatgttgtctgaacttggctgcaatgttgaccgctca
acatcagccttttgtggcataaaagagctcgcccgacgcttctcattgacttttggcttg
gatcagttgaagaccagggaggctattgccatgttacataaggatggaattgagtttgct
tttaaggaacctagtccccaaggacaggggagtccacctctcaatctagcttttttagat
atcctgagcgagttctccagcaaactaattcggcaggacagaagatcagttcacatgtac
ctggagcgattcatgacggttcagatggccctgcagcgagaggactgctggttgcccctc
atctcatacaggaactccttgcaggctggaggggacgatgacactatgtcggtcatcagt
gggatcagcagtcgagggtccaccaggagcaagaagtcaaagcctgccacttctagcaaa
aggaaattgcctgaagcagaagagaacagctgcagcagcactgatgcagtttggatgaac
cgtgagcagaatgtgcagacgccagtgatgatgcattctccccacctcacctctactgtg
ctgagggatccaaagaagatgaggccagaggacagctacacaactgcattcaccatgcca
acagagcagaattcccatcagcatgtgcctccccagcagcagccacaccatcaccaccag
actgccattgactacaatacgcaggttacttggatgttgacacagaggcaacaagcggag
gcccgtcaacagcaggaccgagttagcatgcactatgccaagatgagaaaccacatgcag
caagcaattcgtcgtggctccggcctgatggaggatgatgaggagccaatagtggaagat
gtgatgatgtcatcagaggaccgcttggaagacatcaatgagggcatggattttgacaca
atcgacattgatttgcctgcttcaaagaaccgccgagaaagaactgaacttaagccagac
tactttgatccgtcttccatcatggatgattcagttctcaatgtttcaatgttctaa
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