Etheostoma cragini (Arkansas darter): 117955045
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Entry
117955045 CDS
T07493
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117955045 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117955045 (alcama)
04090 CD molecules [BR:
ecra04090
]
117955045 (alcama)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
ALCAM
117955045 (alcama)
CD molecules [BR:
ecra04090
]
Proteins
117955045 (alcama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
C2-set_2
I-set
V-set
C2-set
Ig_4
Syndecan
Motif
Other DBs
NCBI-GeneID:
117955045
NCBI-ProteinID:
XP_034745063
LinkDB
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Position
13:complement(7452242..7528499)
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AA seq
562 aa
AA seq
DB search
MDSAAFLLLAFVSFSTLLQVWGTGNVTALYGEVIVIPCNGGAPAPEDLMFVKWKYEKDDG
TPGDLLVKQARSPKATVQATDDYAQRVSIDAKFSLLISQATLKDQKTFTCMVVSASNLME
YPISVLVYKKPSSVQIMDKSKVLQKDKLTMVGTCVSANANPAATITWKMNGKPLVADGKA
VVITPSMKLDPATGLSTTSSTLQYAASKEDVAAVFACLSTHKLTNQETKLEPFPIYYPSE
KISLEIMSKRPIVEEDNVTLKCHADGNPPPSSFFFHIKGQKIPVVNSDTYTLTSISRDAG
GEYKCTLADNEKMEASQSIAVSYLDVSLTPTGKVVKAVGDPLPVTIEKNASGDSKVSWTK
NGKALKELQFSKLTYADAGVYVCEVSMTGITRRQSFELVVEGKPRITSLTKHRADDDNYK
VLTCEAEGVPEPNFQWSVNSTDVKKKSSYTNGKVTHKITVVPTVNLTVTCTVSNKLGEDT
RTINVSSVIKEENEEKGAHEDSEDQAKLIVGVMVGLLIAAAIVGLIYWLYMKNSRQGSWK
TGEKELGTSEESTKLEDNNHAV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggactccgctgccttcctattgctggctttcgttagcttctccacgcttctccaagtg
tggggaacaggcaatgtgactgccctgtatggagaggtcattgtgataccatgcaatggt
ggagctccagcgcccgaggatctgatgtttgtcaagtggaaatacgagaaagatgatggc
actcctggtgatctgttggtcaaacaggccaggagcccgaaagccacggttcaggccaca
gacgactatgcccagcgcgtcagcattgatgccaagttcagcctgctcatctctcaggcc
acgctcaaagaccagaagaccttcacctgcatggttgtgtcagcctccaacctcatggag
taccccatctctgtccttgtttacaagaaaccgtcttcagttcagattatggacaagtct
aaagtactgcagaaggacaaactaacaatggtgggaacatgcgtttcggcaaatgcaaac
cctgcagctacaatcacctggaaaatgaatggaaagcccttagtagccgatgggaaagct
gttgtgataactcctagcatgaagctggatccagccacaggcctgtccaccacctcctcc
accctccagtatgcagcttccaaagaggatgttgctgcagtctttgcatgcctgtccact
cataagctgaccaatcaggagactaaactggaaccctttcccatttactatccatcggag
aagattagcctcgaaattatgtcaaaaagacccatcgtagaagaagacaacgtgacgttg
aagtgtcacgctgatggcaaccctccacctagctccttcttcttccacatcaagggtcag
aaaataccagtggtaaattcagacacctacactttgacttccatcagcagagatgctggg
ggtgaatacaaatgcaccctggctgacaatgaaaaaatggaggcatcccaaagcattgct
gttagctacttggacgtaagtctgactcccactgggaaggttgtgaaagcagtaggggac
cccttgcctgtgacgattgaaaagaacgcttctggtgactctaaagtttcatggacaaag
aatggaaaggcattgaaggagctgcagtttagcaagttaacctatgctgatgcaggagtg
tatgtgtgtgaggtttccatgaccggcatcacgcgacgtcagagctttgaactggttgtt
gaaggaaagcctaggatcaccagccttaccaaacaccgtgctgatgatgacaattacaaa
gttctgacatgcgaggctgagggtgtaccagaacccaactttcaatggagcgtcaatagc
acagacgtaaagaagaagagctcctacactaacggcaaggtcacccataaaatcactgtg
gtccccacagtgaatctgactgtcacctgcacagtcagcaacaagctgggagaagatacc
aggaccatcaatgtttcctctgttattaaggaggaaaacgaagaaaaaggtgcccatgaa
gattcagaggaccaggccaagctcatagtgggagtcatggtagggctcctcatagctgct
gccatagtgggtctcatctactggctctacatgaagaattcaagacaaggaagctggaaa
actggggagaaggagttgggaacatctgaggaaagcacaaaactagaggacaacaatcac
gctgtttaa
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