Etheostoma cragini (Arkansas darter): 117955067
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Entry
117955067 CDS
T07493
Symbol
gabra3
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117955067 (gabra3)
04082 Neuroactive ligand signaling
117955067 (gabra3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117955067 (gabra3)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
GABA-A
117955067 (gabra3)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117955067
NCBI-ProteinID:
XP_034745101
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Position
13:4994271..5094766
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AA seq
480 aa
AA seq
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MAAAHWKPKSLDLGWWIILLLHNLLPEARAVVGHREPLPDDSRDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDF
PMDAHACPLKFGSYAYTNNEVIYLWTQGDERSVAVAEDGSRLNQYDLLGHVIGKETISSS
TGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEGMEI
REPFQANMARINDMRRESTTLSKKANNTFNIVGTTYAINVAKDQGLTTISKSASGASAKQ
PYLHKMEDPYTEAKKSYNRVSKVDKISRIIFPVLFFIFNLGYWATYVNRKPAIMKANNLN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcacattggaagcctaaatcactggacttgggctggtggatcattctcctg
ctccacaacctcctccccgaagccagggcagtagttggacacagagagccgttgcctgat
gacagcagagacaatatcacaattttcacccgaatccttgacaggctgttggatggatac
gacaacaggctacgtcctggactgggagagagtgtgacagaagtgaggacaaacatctat
gtgacgagttttgggccagtgtcggatacagacatggagtacaccatcgatgtcttcttc
cgtcagagttggagggacgagaggctgaagtttgacgggcccatgcaagttttacccctc
aacaacctcttggccagtaagatatggactccggatacatttttccacaatggaaagaaa
tcagtggcccacaacatgacgactcctaacaaactgctccgactagtcgacaacggaaca
cttctctacacgatgaggttgaccattcatgctgagtgccccatgcacctagaggatttc
ccgatggatgcacacgcctgtcctctgaaattcggaagttatgcttacacaaataacgag
gtgatctacctgtggacccagggagacgagaggtctgttgctgttgcagaagatggctcc
aggctgaaccagtatgacttactgggacatgttattggcaaagaaaccatcagttccagc
acaggagaatacgtagtgatgacaacatatttccatttgaaaaggaaaattggctatttt
gtgattcaaacctacctcccgtgcatcatgactgtcatactgtctcaggtctccttctgg
ctaaacagagaatcggttcctgctcgcactgtttttggggtcaccactgtcctaaccatg
accaccctgagcatcagtgctagaaactcccttcctaaggtggcctatgccacagccatg
gactggttcatggctgtttgctatgcctttgtcttctctgccttgattgagtttgccacg
gtcaactacttcaccaagcgcagctgggcatgggatgggaaaaaagagggcatggaaata
agggaaccgtttcaggctaacatggccaggattaacgatatgagaagagaatctacgacc
ttgtccaaaaaggcaaacaacaccttcaacattgtgggaaccacctacgccatcaacgtt
gctaaagaccaaggtttgacgaccatttccaagagtgccagtggagcgtcggccaaacag
ccctatctccataaaatggaagacccctacacggaggccaagaaatcctacaaccgtgtc
agcaaagtggacaagatatcacgcatcattttcccagttctgttcttcatcttcaactta
ggctactgggccacatacgtcaacagaaagcccgctatcatgaaggcaaataacttaaac
tga
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