Etheostoma cragini (Arkansas darter): 117955094
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Entry
117955094 CDS
T07493
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X1
KO
K02620
transcription factor 7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04310
Wnt signaling pathway
ecra04519
Cadherin signaling
ecra04520
Adherens junction
ecra04916
Melanogenesis
ecra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117955094 (tcf7)
09133 Signaling molecules and interaction
04519 Cadherin signaling
117955094 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117955094 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117955094 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117955094 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117955094 (tcf7)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
117955094 (tcf7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
ZNF704_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117955094
NCBI-ProteinID:
XP_034745136
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All DBs
Position
13:19602485..19678577
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AA seq
551 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMIAFKDEGEQEEKIQENAFTERDLADLKSSLVNESEINQSPNA
AAVRRGQQGEQRGFPEKHRVHHDGVSKHQDGGMYKTQPYPGYPFLMLPDPYLPNSSVSPS
SNKVSVVQQSHGMHPLTSLLPYSNEHFSPSPPHLPTDMSQKTGVHRHQSQDLSGYYSLPP
GGVGQITPSMGWQSQPVYPALSPCGFRQPYSSNLSSAASYSRYRSLLVGPSQTEPRKFPH
SLMLGPSGMHPTGIPHPAIVPPTGKQEHDQYDRGMYVKPHMEAKREKEPKKPVIKKPLNA
FMLYMKEMRAKVIAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPT
WSARDNYEAGLSGVAGEKSKADWGKKKRRKREKMQDSNTDPGSPKKCRARFGLNQQTDWC
GPCRRKKKCIRYLQGGGCPSPTSSDLSAIDSPPSPARHRLYQHQLPPSPGCSPPTSPSTH
LPLSPPAHTRSHTRLPLQQSAGKRSDLRQPATKHTHTHLDLTGKQTHSSTTAPLSAAKAA
GLSLNVLTESQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagcggcggcggggacgacctgggagcgaatgatgagatgatagcg
tttaaagacgaaggggagcaagaggagaaaattcaagaaaacgcgttcacggagagagac
ctggccgacctcaagtcctctctggtgaacgagtcggaaataaatcaaagtccgaacgca
gcggcggtgagacggggacagcagggtgaacagaggggcttcccagaaaaacaccgggtg
catcatgacggagtgtcgaagcatcaagatggaggcatgtacaagacgcagccgtatcca
gggtatccattcctgatgctgcctgacccctacctccccaacagctctgtttctccatct
tccaacaaagtgtctgtggtgcagcagtctcatgggatgcatccgctgacgtccctcctg
ccctacagcaacgagcacttcagccctagtcctccacacctgcccacagacatgagccag
aagacaggagttcacaggcaccagtcccaggacctctcggggtattactccctccctcca
ggcggcgttggacagatcactccctccatgggctggcagagccagccagtctatcctgcc
ctgtccccctgtggattcaggcagccctactcctccaacctctccagcgccgcctcctac
tccaggtatcgtagcctgctggttggaccaagccagaccgagccaagaaagttccctcac
tctctgatgctaggcccgtcaggcatgcatcctacagggatcccccacccagccatagtg
ccccctacaggaaaacaagagcacgatcagtatgacaggggcatgtatgtgaagccgcat
atggaggccaagcgggagaaggagcccaagaagccggtcattaagaaacccctgaacgcc
ttcatgctctacatgaaggagatgagggcaaaggtcatcgcagagtgcacattaaaggag
agcgccgccatcaaccagattctgggaagacggtggcatgcactgacccgggaggaacag
gccaagtactacgagttggcgaggaaagagagacaacttcacatgcaactctacccgacc
tggtctgccagagacaattacgaggcgggccttagcggggtcgcaggggaaaagagtaaa
gctgattggggcaaaaagaagaggaggaaaagggagaaaatgcaggactccaatacagac
ccgggctctcctaagaaatgccgggctcgcttcggcctcaaccaacaaacggactggtgc
ggtccttgcaggaggaaaaagaagtgcattcgctaccttcaaggaggaggctgccccagc
ccaacttcttcagatttaagtgctatagactctcccccgtcccccgcccgccaccgtctc
taccagcaccagcttcccccctccccgggctgctccccacccacctctccgtcaacacac
ctccccttgtctccgccagcacacacgcgctcacacacgcgcttacccctgcagcagtct
gccggcaagcgcagcgaccttcgtcagcccgcaaccaaacacacacacacacacctggat
ctgaccggcaagcagacgcacagctcgacgacggcgccgctgtcggccgccaaggccgca
ggactctctctcaatgtgctaacagagtctcagtga
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