Etheostoma cragini (Arkansas darter): 117955133
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Entry
117955133 CDS
T07493
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117955133 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117955133 (chrne)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117955133 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SLATT_5
Motif
Other DBs
NCBI-GeneID:
117955133
NCBI-ProteinID:
XP_034745235
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Position
13:10770400..10780090
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AA seq
518 aa
AA seq
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MMAACRFWTFLGIITILGTSIVHVQCNEESKLIGDLFKGYNKNIRPVVHPEDKLEVQIKL
TLTNLISLNEKEETLTTNVWIEIQWSDYRLTWNASNYYGISLIRVPYSTVWLPDIVLENN
IDGKFDVAYYANVLISSTGGMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSANE
MDLILAIGDNGKTIEWVDIDPEAFTENGEWAIVHRPARKRINTRYSPDDLEYQEITFNLI
IQRKPLFYVINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKIP
ETSLSVPLIGKYLIFVMSVTTLIATNQIVVLNFSLRSPNTHTMSHSIKHLFLEMVPRFLG
MSPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVD
NMDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTRQQNNIGSEIESWVLIGKMIDKVCF
WAAMLLFIIGTVWIFLTGHFNRAPDFPFPGQNKKYAPI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcatgcaggttttggacatttttgggaattataaccattctcgggacttca
atcgttcatgtgcagtgtaatgaggagtccaagctgatcggtgacttgttcaaaggctac
aacaagaacatccgcccggtggttcatcctgaagacaagctggaggttcagatcaagctt
accctcactaacctcatctccctgaatgaaaaggaggagactcttacgactaatgtgtgg
attgagattcaatggtccgattatcgcctcacctggaacgcgtctaactattatgggatt
agtctcattcgtgtcccatacagtactgtttggcttcctgacattgtccttgagaacaac
attgatggcaagtttgatgtggcttactacgccaatgtgttgatcagcagcactggtggg
atgtactggttgcctcctgctatctatcgcagcacttgtgccattgagatcacctacttc
ccatttgattatcaaaactgcacgctagcattcaggtcccagacgtacagtgccaatgaa
atggacctcattttggctattggagacaatggcaagactattgagtgggtggacattgac
cctgaggctttcacagagaatggcgagtgggccatcgtccatcgcccagccaggaagagg
atcaacacacggtattccccagatgacctagagtatcaggagatcacattcaatctgatc
atccagaggaaacccctcttctacgtcatcaacatcatcctaccctgctccctgatctcc
tcgctagttgtcttggcctacttcctacctgcacaagccgggggacaaaagttgactgtg
tccatctctgtcttgctggctcaaactgtcttcctctttctcattgctcagaagatccct
gagacatctctttctgtccctctcattggcaagtatctgatctttgttatgtctgtcact
actctcattgccaccaatcaaattgtggttctaaacttctccctgcgcagccccaacact
cataccatgtcccatagcatcaaacatttgttcctggaaatggtaccccgcttccttggc
atgtcccccctggtggatgacagtgaggtgacaacagaggtaaatggagtgagggagcgg
cggcgcagctccttcggcctcatgcagagagcagaggaatatgtcctgaaacaacctcgc
agtgaaatgatgtttgacaaacaaagagagaggcatggtctcacacggtcgatagtggat
aacatggatgtcagcagtacagccaacttgtacaagagtttggctcaagctgcacccgag
atcaagcaatgtgtagatgcctgcaactttattgctgagagtacaagacaacaaaataac
attggatctgaaattgaaagctgggtactgattgggaagatgatcgacaaggtgtgtttc
tgggctgccatgctcctctttatcattggcacagtgtggatcttcttaacaggacacttc
aaccgggcacctgactttccatttcccgggcagaacaaaaaatatgccccaatttaa
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