Etheostoma cragini (Arkansas darter): 117955155
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Entry
117955155 CDS
T07493
Name
(RefSeq) cilia- and flagella-associated protein 54-like isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117955155
Cilium and associated proteins [BR:
ecra03037
]
Motile cilia and associated proteins
Sperm associated proteins
117955155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
117955155
NCBI-ProteinID:
XP_034745297
LinkDB
All DBs
Position
13:complement(12836566..12861714)
Genome browser
AA seq
2597 aa
AA seq
DB search
MDLPASYYGELDKRNPVISAFERDINSFITLMKRVASSTSQDNGSYAKGIKILVEIWKKY
KHRLPSKLYQKRMLQIADFLSGIKLYHLALWQGYSLHLLQFNSVKITDITDVDHFMACFF
PEGFDTDQDTFTMKIRAMQGCALCIFEQEKSQSILSQKGLCKLLHLLNFIRIMMQAFQQH
EHLCWQIYNGSLHIYTICRYLMTMNCSAEALEYLLWASISLEFSIPLMTAKCLPWIVTLY
CAVCHCYYNNQAALQAEEFARRALGKINELAKLEEQNKVPATRETQRAFKEASIKLAAMI
FKRAVFEARRRHKPIFRIKTKSTLKDIPNAPWPRTTTEHMLMGLFDSSAARFLGILEALW
DSTRRPLQTRMPDNPELQEVILELLSAGISILSGDTTTSKSLLSPSALTPTSTLMELAVT
GENKVPIMSAMRFIKMLFQYKQPDAFTELARDILQVLSGVEGQSFRRAELEVALLDSFNS
VLSSQKSHPREDNIVDDRHKSSFSMSDEFIGLVDTLHKSVCGSAPEVQPDGDLVLDVVLF
LWGKVKLGIQRDQLHNLEFTHYLKKVDNYDKWLWCLSMLCEVAFACDLATVDCIMTVEMI
HTLAILLESTAEHTNQYPRALDAFCEGVKPRYFSLLENSSRELLQKVCEVVERGLEALAK
GVATLLPRDYSAIIDPAFIQKFCLLPPLTPTKCSLISSEESNVEDETSEKEKEAEESKAE
LDSKAFPHTQSTRVFLLATDLHLQLDIIHHRASLKLLQLNAVAESELLDRINKNKVSKAL
FLIQKASMAYNNMGPNNSNKAKSLLEEASTLIEKAGMEERKLFMSTILKTPAENKDKGIK
EKEENPPPPPILLSRTDHSLTFAPAPYNLEGQVSWYQLCGRAADGINRKVRLGDCSLPGT
GNMVSAVSDECVLRVEGLEPNQKYVFAVAAYNSQGKLLGNTIGGSTFPLLASLPLPLLST
WAHLAQVAFQTEQYAVAKRACRELWIHYTYPDPRSHSTQERLAITGLHVQTLQRSSPHLC
QLFLASVFIETEINIQQGSLHCDSFSDNGPFIWEQEARLAECKRMLVATDLAMWLNDGSA
AVQAVVTCYGLLAPLIFHQIFCDPVVQVLKKCLIVLEENSGLLKQKWTGNKSESLMHMIA
CITYYLSKALRVLREHQMASVVMDCGRSLLQEVYDAQLQIPRLTNKAVGSKAHHASTIKG
EIKISLQLKALHWKNKKRITSEEALTADDETARPLTGCEDPTIMYDLISNSTLKDAYQDV
MKHRREAYFIEFAALLIQRTMEEGHPDLVLKWGQSMFEFLSRRDEVMGLSTKCLEGNNHS
KRRSSAQAPKGNEPPQKNKNSPSLDDTRKKLKQKMPPSMLQRVRTNREMQVVENLLTIMS
SVVRRHKKQLQLRNTCCEERVWKSHLNYSMAQAHLALLYQGLDQLHGGALQHSYRQLNPL
CFSLAYSGILVWRDSQPQQSSKNEAVPERDSSQSGLREYVAADQKRSKTEVKMDDSVTEE
SCEEGEDSSQIVEQQIETHRHTAVMLLNSLEKAALHLRRAMVLAHRGSHWTTLQCVCHTV
WDQSCRINILVQRAAQLKPPSSIIADQLHTTFTPLLVLATDLIMDMLNRLGLWSLYDSDL
TEEELESSLHFSAPMDNSTQVDLRWVRTLVLHTLECLHDSGTWEKLAHFALLFNSYTRER
YALITTPLLVYAQRRLLERIYSCGGPAVPQPHHVKTQKATGKEVTYRSYAGSQLLIGWTP
HPAQQLPIHKKATLTNYTPRGAVDLKGAEIQHSRSLVCVPLDVEDTLSCYRQALEKRPHC
LQVFHHSRSLLLLLLAYTKPCFAEQLIHCQSRSLSHSASLVEFSPLVMPTPNIQPCDLTE
EDYSTADALYSLPISPDHISTVSAAYSTLDKYLQANNHDSLRILVLHEMGNLQFYNGNTR
AAHSHWSKAVDCALQSSGAVEKWDGVFFGGGSLQQTLKQAGIWGCLQAAGLTAKIAQYIL
TSDISQRTKCSLMSAHLFKCVLCCSLAQPQADLQYACHNIGDELLPGVDLFSEPHRVHLG
TTVTSLNFVCHWLFTTGYYITLLPMLALYLHFVGTVCRDLKRTVEGKILKIRALTELCLF
TEAVKETVQLTQGTGVFLPHGHYIAKDNLQPVKTFYSNKSLLDNAEALEELVNCDFAPDV
STMYGSTLCLRFNLARVQLVLALSNTVHNPPVPDAVEGEACASLKSCLVKSKPVESDILD
NEGSCQTTGEPKVLTLDTKKERLSPERIKFLLLEGASSLFHSMSQQLPSQSCSEMENLEL
AIESNLLKANLYLQQGHAALSSEMAISSLVLLQTSPVIMRGIIPGSQKPASEIPHARIRS
GTEDCNVSDPLDGDCPGAVEASERIGVSLWLRCRLALVRSLAANIPGTAALFPGKNFYEE
ADRALQDGLDECARWRDLDIQALLMVEGAELEARRGKIDDSMDMLQEAMTLLSGRTCMPP
GSGVTLARATLLLSDLRGAQSTTLLKLTQKLLKKQLCIFGQSVVLDDGKMYFSPPGPSNI
YLPYLTMLDQTTLRIGHILDLSAVQMPVSTQSSQSPSRQHSHQSSQTERETQAPDPCLNN
PSTSRPTSHPCSARKPE
NT seq
7794 nt
NT seq
+upstream
nt +downstream
nt
atggacttaccggcttcatattacggagaacttgataaaagaaacccagttatttcagcc
tttgaacgagacattaactcgtttataacactgatgaaacgagtcgcttcttcgaccagc
caagacaacggctcttatgctaaagggattaaaatcctggtggagatctggaaaaagtac
aaacatcgactgccttcgaagttgtaccagaagcgcatgttgcagattgcagactttctc
tctgggattaagttgtaccatcttgctctttggcagggctacagtctccacctgctgcag
ttcaactcagtgaaaataactgacatcacagatgtggaccacttcatggcgtgcttcttc
cctgaagggtttgacacagaccaagatacctttaccatgaagatccgggcaatgcagggc
tgtgccctgtgtatatttgagcaagagaaaagtcagagcatcctcagccagaagggactc
tgtaaactactgcatttacttaacttcatcaggatcatgatgcaggcatttcagcaacat
gaacacctgtgctggcaaatatataatggttcattacacatctacaccatctgccgttac
ctgatgaccatgaattgtagtgcggaggcactggagtaccttctgtgggcaagcatcagt
ttagagttttccattcctctgatgactgctaagtgtttgccatggattgtcacactctac
tgtgctgtctgccactgttactataacaaccaggctgctttgcaggcagaggaatttgcc
aggagagcccttggaaaaatcaatgagctagcaaagctggaggagcagaataaagttcct
gccaccagagagactcagagagctttcaaagaagcctctatcaagctagctgccatgatt
ttcaagcgtgcagtgtttgaggccagaaggagacacaaacccattttcagaatcaaaacc
aaaagcaccttgaaggacatacctaatgcgccgtggcctcgtactacaacagagcacatg
ctaatgggcctgtttgacagcagtgcagcgcggttcttgggaatcttggaagctctttgg
gacagcaccagacgcccgctgcagacaaggatgccagataatccagagctgcaggaggta
atcctagaactcctgtcagctggcatcagtatattatctggcgacacaactactagtaag
tctcttttgagtcctagtgcactgacaccaacatcaacgttaatggagttagccgttaca
ggagaaaacaaagtgcccattatgtctgcaatgcggtttataaagatgttgtttcagtac
aagcagccagatgctttcactgaacttgccagagatatactgcaggttttgtctggtgtg
gagggccagtcattcaggagggcagagctggaggttgctttacttgacagtttcaacagt
gtgctgtcttcccagaagagccatcctagagaggacaacatagttgatgacagacacaag
tcttcattctcaatgagtgatgagttcattggcctggtagacaccctgcacaagtctgtt
tgtggatctgctcctgaggtgcagccagatggagatctggttttggatgttgtattattt
ctgtggggtaaagtgaagctgggtatccagagggatcagctgcataacctagagtttaca
cactaccttaaaaaggtagataattatgacaagtggctctggtgtctgtctatgctgtgt
gaagtggcctttgcctgtgacctggcaactgttgactgcataatgacagtagaaatgatc
cacacattggctatactgctagagagtacagctgaacacactaatcaatatccaagagct
ctagacgcattctgtgagggtgtgaaaccacgctatttctctcttcttgagaattcaagc
agagagctgcttcagaaggtttgtgaggtggtggaaagaggtcttgaagctctggcaaag
ggtgtagctacactgctgccccgagattactcagcaatcatcgaccctgccttcatacag
aaattttgtctcctccctccattgactcccaccaaatgttctctgatatcatcagaagag
agcaatgtagaagatgaaacaagtgagaaggaaaaagaagcagaggaatctaaggcagaa
ctagacagtaaagcctttccacacactcagtccacacgtgtgttcctgctggccacagac
cttcatctacagctagacatcatccaccacagggcttccctcaagttactgcagctgaat
gcagtcgcagagtcggaactgttggatcggatcaacaagaacaaagtgtccaaagctctt
ttcctgatccagaaagcctcgatggcgtacaacaacatggggccaaataacagcaacaaa
gccaagagtctgctagaggaggcctccaccttgatagagaaagcagggatggaagagaga
aaactgtttatgtccaccatccttaagactccagctgagaacaaagataaagggataaag
gagaaagaagaaaaccctccacctcctcctatcctgctctcacgcactgaccactctcta
acctttgctccagcaccatataacttagagggacaagtgagctggtaccagctctgcggc
cgtgcagctgatggcattaaccggaaagtccgccttggagactgcagcctgccaggaact
ggaaatatggtatcagcagtatctgatgagtgcgtgctgagggtggaagggctggagccc
aaccagaagtatgtgtttgctgtagcagcctacaacagccagggcaagctactgggcaat
accataggagggtcaacattcccacttctggcatccctgccactaccactgctctccacg
tgggctcacttagcacaggtggcatttcaaacagagcagtatgccgtagcaaagagagcc
tgcagagaactgtggatccactatacttaccctgaccccaggtcccacagcactcaggaa
agacttgctatcacagggctgcatgtccagacactgcaacgctcgtctcctcacctgtgt
cagttgttcctcgcttccgtcttcattgagacggagatcaacatccagcagggatcgctc
cattgtgactcattcagtgacaatggaccatttatctgggaacaggaggccaggctggca
gagtgcaagcgaatgctggtggccacggacctggcaatgtggttgaatgatggtagcgct
gccgtgcaagctgtagttacatgttatggcctcctggcccctttaatcttccatcagatc
ttttgtgaccctgttgtacaggtgttaaaaaaatgcttgatagttttggaggagaattca
ggtcttctcaaacaaaaatggactggaaacaaatcagagtcattaatgcacatgatagcc
tgcatcacctactacctgtccaaggcattacgagtcctcagggagcatcagatggcttct
gtagtgatggactgtggtcgcagcctgctccaagaggtctatgatgcccagctgcagatc
cctagacttaccaataaagctgtgggttctaaggcacatcatgcatcaacaatcaagggt
gaaataaagataagccttcagctgaaggcactgcattggaagaacaagaaaagaatcaca
tctgaagaagctctcactgcagacgatgagactgcacgcccactgactggctgtgaggat
cccaccattatgtatgatctaatctccaacagcacattaaaggatgcctatcaagatgta
atgaagcacagacgcgaggcatattttattgagtttgcggcacttcttatccagagaacc
atggaagaaggccacccagaccttgtgttaaagtggggacaaagcatgtttgaatttctt
tccaggcgtgacgaggtgatgggactgtctacaaaatgtttggagggaaacaatcatagt
aaaagaagaagtagtgctcaggctccaaaaggaaatgaaccaccacagaagaataagaac
tcaccttcacttgatgatacaagaaagaaactaaagcagaaaatgccccccagcatgctt
cagagagtgagaactaacagggaaatgcaggttgtggagaacctgctaaccataatgtcg
tctgtggtgcgacgtcacaagaagcagcttcagctgaggaacacgtgctgtgaggagaga
gtgtggaagtctcaccttaactacagcatggctcaagctcatttagcgctgctttaccag
gggctggaccagctgcatggaggagccctgcagcacagttacaggcagttaaatcccttg
tgtttctccctggcctactctggtatcctagtgtggagggactcacagccacagcagtct
tctaaaaatgaggctgtccctgaaagagactcctctcaatcgggtcttagggagtatgtg
gctgcagaccaaaagaggagcaaaactgaggtcaaaatggatgactctgtcacagaggag
agttgtgaggagggagaggactcctctcaaattgtggaacagcagattgagacacacaga
catactgctgtgatgctgctgaactcacttgaaaaagctgctttacatctccgaagggcc
atggtgttggcccatcgtggcagccactggaccactcttcagtgcgtgtgtcacactgtg
tgggaccagagttgcagaatcaatattctagtacagagagctgctcagcttaaacctccc
tcctcaattatagcagaccagctgcacaccaccttcacaccactactggtgctggctact
gacctaataatggacatgctgaacagactcggactgtggagtttgtatgacagcgacttg
actgaggaggaactagagtccagtctccacttctcagccccaatggataacagcacccag
gtggacctgcgttgggtccgcaccctggtgttgcacactctggagtgtctccatgatagt
ggcacatgggagaaactggctcactttgccttacttttcaactcatacacacgggagcgt
tatgcgttgatcacaactcctctactagtctatgctcagaggagactgcttgaaaggatt
tattcttgtggaggacctgcggtccctcaaccacaccatgtcaagacacagaaggccact
ggcaaggaggtgacttacaggagctacgcaggctcccagctgctcattgggtggacccct
caccctgcacagcaactgcccattcacaaaaaagcaacactcacaaactatactcctcga
ggagcagttgaccttaaaggtgcagagatacagcactcccggtcccttgtgtgcgttcct
ctggatgtagaagacacactgagctgttatcgtcaagctcttgagaaaagaccacattgt
cttcaggtcttccaccatagtcgctcattactgctgctacttcttgcatacacaaagccc
tgctttgcggaacagttgatacactgtcagagcagaagtctcagccattcagcaagcctg
gttgagttcagtcctttagttatgcctacacctaacatccaaccttgtgacctgaccgag
gaagactacagtactgcagatgctctctacagcctccctatcagccctgaccacatttcg
actgtcagcgctgcatactccaccttagataagtatctccaggccaacaaccacgactct
ctcagaattctggtactgcatgaaatgggaaacctacagttctacaatggaaacacacgg
gcagcccactcacactggagtaaagctgtagattgtgccttacaaagctcaggcgcagta
gagaaatgggatggcgtgttctttggtggtggctccctgcaacaaaccctgaaacaggct
ggcatttggggatgtctacaggctgctgggctcactgctaaaattgcacagtatatctta
acgtctgatatcagccaacggactaagtgctctctcatgtctgcacacctctttaagtgt
gtgttgtgttgctcgctggctcagccccaggccgatctccagtacgcctgtcacaacatc
ggagatgaactgctccctggagtcgaccttttctctgaaccccacagggttcacctcggc
accactgtaaccagccttaacttcgtctgccactggcttttcaccacaggctactacatc
acgctactgcccatgctggccctttacctacattttgtagggactgtttgcagagatctc
aaacgcactgttgagggcaaaatacttaagattcgtgcccttaccgaactgtgtctgttc
actgaagctgtaaaggagacagttcagctcacacaaggaacaggggtctttctgcctcat
ggacactacattgccaaagacaatctccaacctgtgaagacgttctacagcaacaaatct
ctcctggacaatgctgaggccttggaggaacttgtgaactgtgactttgctccagatgtc
agcacgatgtatggatccacattatgcctccgattcaaccttgctcgtgttcaactagtc
ctggcactcagtaacactgtacataaccctcctgtgccagatgctgttgaaggagaagct
tgtgccagcttaaaaagttgtttggtgaagtcaaaacctgtggaatcggacatactggac
aatgagggctcctgtcaaactacaggagagcctaaagtgctgaccctagataccaagaag
gaaaggctttctccagaaaggattaagttccttttgctagaaggagcttcctccttgttt
cactccatgtcgcagcagctcccatcccagtcctgtagcgaaatggaaaatctggaactg
gcaatagagtccaatcttctaaaggccaacctatacctgcagcaaggacatgctgccctc
agttctgagatggcgatttcatccttggtgcttctgcagacgtctcctgtaattatgaga
ggaatcatacctgggtctcagaaacctgcatctgagatcccacatgccaggattagaagt
ggtactgaagattgcaatgtgtcagacccactggatggagactgtcccggagcagttgag
gcaagtgagaggattggagtttctttgtggctgcgttgccgcctggctctggtccgcagc
ctggctgcaaacatccccggcacggctgctcttttcccaggtaagaacttctatgaggag
gcagatcgggcgttacaggacggtcttgatgaatgtgcacgatggcgagaccttgatatt
caagcccttttgatggtggaaggtgcagaattggaagcacggagaggcaagattgacgac
agtatggacatgctgcaggaagcaatgaccctgctgtcaggacggacgtgcatgccacca
gggtccggtgtgactctggctcgggccactctgctgctcagcgaccttagaggagcacag
agcaccacacttctaaaactgacacagaaactactgaaaaagcagctgtgtatttttggt
cagagtgtggtgttggatgatggaaaaatgtatttctctcctcctggacccagcaacatc
tacctcccttacctcaccatgctggatcagacaactttgcgaataggtcatattctggat
ctcagcgccgtgcaaatgccagtctctacccagtcctcacagtccccttccaggcagcat
tcacaccagtccagccaaactgaaagagagactcaagcaccagatccatgtctgaacaac
ccaagcacctccagacctacaagccacccatgctcagccagaaagccagagtag
DBGET
integrated database retrieval system
