Etheostoma cragini (Arkansas darter): 117955160
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Entry
117955160 CDS
T07493
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117955160 (ddx52)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117955160 (ddx52)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
90S particles
Helicases
117955160 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
117955160
NCBI-ProteinID:
XP_034745309
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All DBs
Position
13:complement(13051405..13057955)
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AA seq
699 aa
AA seq
DB search
MPGWMRAHYHAAGGMDAFELFRKLGAGAKFDLKKFGQDAARFKVARSQGGEASLDALSAI
DYFGTGSTNGSQSSSVGLEVEKDDDDDEDGEEHEVGSESGDSGAGSKRKKKEKDVRTKKK
KRSKVEVEAGGGALKDMEGSGITWTSALDRKIQILPSDGKEKSSLKRLKHLHQEKVNRIR
SQHRINVHGCDVPNPVCSFEELQSEYRLNPRVLQNLKDAGLNSPTPVQMQAIPLMMHGRE
LLACAPTGSGKTLAFCLPLLAHLQQPANLGFRAVVLSPTRELANQTYRELLRLSEGVGFR
VHIMDKASLAAKKYGPQSNKKYDILVSTPNRLVYLLKQDPPALDLSSVEWLVVDESDKLF
EGGKTGFREQLAAVFLACSGSKVRRAFFSATCTPDVEQWCRLNLDNLVSVNIGHRNTAVD
SVEQDLLFVGTENGKLVAMRDIIKKGFLPPMLVFVQSIDRARELFHELVYEGINVDVIHA
DRTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVLNYDFPTSSVEYIHRIGRTG
RAGHQGKAITFFTENDKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKKPPSRS
TICTTPRFLMKKKGKAPNKAQRGETRAAGGEQKEKNGSQTPVQKQKGEKMTKGQEPKRRH
KTQKEGGRETHTVSQKTGSNSSGAKLKKNKGKKNKPEEK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatggatgcgggcacactaccacgctgctggaggaatggacgccttcgaactg
tttcggaaactcggagctggagcgaaatttgacctgaagaagtttgggcaagacgccgct
cggtttaaggttgccagatctcagggaggggaagcgtctttagatgctctctctgcgatc
gattactttggaacaggatcaaccaatggatcccagagcagttcagtaggactggaggta
gagaaggatgatgatgatgatgaggatggagaggaacatgaggtgggaagtgaaagtgga
gattctggtgcaggaagcaaaaggaagaaaaaggagaaagacgtgaggacgaaaaagaag
aaaagaagcaaggtggaagtggaagctggaggtggagcgctgaaagacatggagggaagc
ggcatcacatggacctccgcattggacagaaagattcaaatcctgccgagtgacgggaag
gagaaatcctccctgaagaggctgaagcatcttcatcaggaaaaggtgaatcgcatccgc
tctcaacaccgtataaatgtgcacggctgcgatgtgcccaaccctgtgtgctcatttgag
gagctccagtccgagtatcgtctcaacccacgtgtccttcagaacctcaaagacgcaggg
ctgaactccccgacgccagtacagatgcaggcgataccgctcatgatgcacggtcgggag
ctcctggcctgcgcccccacaggatcagggaagactttggctttctgtctcccactgctc
gcccacctgcagcagccggccaacctgggcttcagggctgtggtcctctccccgaccaga
gaactggccaaccagacctacagagagctgctccggctgtcggagggagtaggatttaga
gtccacatcatggacaaagcctctctggcagccaagaaatatggaccacagtcaaacaaa
aaatacgatatactcgtcagtactccaaacagactcgtctaccttctcaagcaggatcct
ccagctctggacctcagcagtgtggagtggctggttgtcgatgagtctgataagctgttt
gagggcggtaagacgggtttcagggagcagctcgccgcagtttttctggcctgttctggt
tcaaaggtgcgcagggctttcttcagcgccacctgcacgccagatgtagagcagtggtgc
cgtctgaacctagacaacctggtgtctgtcaacatcggacacagaaacacggcagttgac
tctgtggagcaggatctgctgtttgttgggacggagaacggcaaactggtggccatgagg
gatatcatcaaaaaaggtttcctgcctcccatgctggtgtttgtgcagtctatagaccga
gcacgggagcttttccacgagttggtgtacgaaggcatcaatgtagacgtgatccacgca
gaccgcacacagcagcagagggacaacgtggtgaacagtttccggtctggtaaaatctgg
gtgttgatctgcacggctctgctcgccagaggaatcgactttaaaggagtcaacctcgtg
ctgaactacgacttccccaccagctctgtggagtacatccaccgaattggtcggactggt
agagctggacatcaggggaaggccatcaccttcttcacagaaaacgacaagccactgctg
cgcagcatcgccaacgtcataaaacaagctggctgtcctgtacccgactacatgattggc
ttcaagaagatacacagcaaagtgaagaggagacttgagaagaaacctccctcgagaagc
accatctgcacaacccctcgcttcctaatgaagaaaaaaggcaaagctccaaataaagca
cagagaggagagacgcgggcagcgggcggtgagcagaaggaaaaaaatggatctcaaacc
ccagtacagaagcagaaaggagaaaagatgacaaaaggacaggagccgaagagaagacat
aaaacacagaaagaagggggaagagaaacacacacggtgtctcagaagacgggatccaat
tcctctggggccaagttaaaaaagaacaaggggaagaaaaataagccagaagagaaatag
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